data_2RDL # _model_server_result.job_id 0DbA6bsNtKRePNsSZydiYQ _model_server_result.datetime_utc '2024-11-05 01:24:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2rdl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":246}' # _entry.id 2RDL # _exptl.entry_id 2RDL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2RDL _cell.length_a 71.272 _cell.length_b 71.272 _cell.length_c 198.575 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RDL _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,I,K 1 1 B,D,G,H,J,L 1 2 A,C,E,F,I,K 2 1 B,D,G,H,J,L 3 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_455 x-1,y,z 1 0 0 0 1 0 0 0 1 -71.272 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 30 A CYS 42 1_555 A SG CYS 46 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 123 A CYS 136 1_555 A SG CYS 188 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf3 A SG CYS 154 A CYS 168 1_555 A SG CYS 167 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 B SG CYS 30 B CYS 42 1_555 B SG CYS 46 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf5 B SG CYS 123 B CYS 136 1_555 B SG CYS 188 B CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf6 B SG CYS 154 B CYS 168 1_555 B SG CYS 167 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? covale ? covale1 A NE2 HIS 45 A HIS 57 1_555 C C1 0QE 6 I 0QE 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.517 ? covale ? covale2 D C1 0QE 6 J 0QE 6 1_555 B NE2 HIS 45 B HIS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.521 ? covale ? covale3 C C1 MSU 1 I MSU 1 1_555 C N ALA 2 I ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.394 ? covale ? covale4 D C1 MSU 1 J MSU 1 1_555 D N ALA 2 J ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.414 ? covale ? covale5 C C PRO 4 I PRO 4 1_555 C N ALV 5 I ALV 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.372 ? covale ? covale6 C C ALV 5 I ALV 5 1_555 C C1 0QE 6 I 0QE 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.555 ? covale ? covale7 D C PRO 4 J PRO 4 1_555 D N ALV 5 J ALV 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.378 ? covale ? covale8 D C ALV 5 J ALV 5 1_555 D C1 0QE 6 J 0QE 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.551 ? covale ? covale9 B OG SER 182 B SER 195 1_555 D C ALV 5 J ALV 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? covale ? covale10 A OG SER 182 A SER 195 1_555 C C ALV 5 I ALV 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2RDL _atom_sites.fract_transf_matrix[1][1] 0.014031 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014031 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005036 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 246 246 SO4 SO4 . F 3 SO4 A 1 247 247 SO4 SO4 . G 3 SO4 B 1 246 246 SO4 SO4 . H 3 SO4 B 1 247 247 SO4 SO4 . I 4 HOH A 1 248 248 HOH HOH . I 4 HOH A 2 249 249 HOH HOH . I 4 HOH A 3 250 250 HOH HOH . I 4 HOH A 4 251 251 HOH HOH . I 4 HOH A 5 252 252 HOH HOH . I 4 HOH A 6 253 253 HOH HOH . I 4 HOH A 7 254 254 HOH HOH . I 4 HOH A 8 255 255 HOH HOH . I 4 HOH A 9 256 256 HOH HOH . I 4 HOH A 10 257 257 HOH HOH . I 4 HOH A 11 258 258 HOH HOH . I 4 HOH A 12 259 259 HOH HOH . I 4 HOH A 13 260 260 HOH HOH . I 4 HOH A 14 261 261 HOH HOH . I 4 HOH A 15 262 262 HOH HOH . I 4 HOH A 16 263 263 HOH HOH . I 4 HOH A 17 264 264 HOH HOH . I 4 HOH A 18 265 265 HOH HOH . I 4 HOH A 19 266 266 HOH HOH . I 4 HOH A 20 267 267 HOH HOH . I 4 HOH A 21 268 268 HOH HOH . I 4 HOH A 22 269 269 HOH HOH . I 4 HOH A 23 270 270 HOH HOH . I 4 HOH A 24 271 271 HOH HOH . I 4 HOH A 25 272 272 HOH HOH . I 4 HOH A 26 273 273 HOH HOH . I 4 HOH A 27 274 274 HOH HOH . I 4 HOH A 28 275 275 HOH HOH . I 4 HOH A 29 276 276 HOH HOH . I 4 HOH A 30 277 277 HOH HOH . I 4 HOH A 31 278 278 HOH HOH . I 4 HOH A 32 279 279 HOH HOH . I 4 HOH A 33 280 280 HOH HOH . I 4 HOH A 34 281 281 HOH HOH . I 4 HOH A 35 282 282 HOH HOH . I 4 HOH A 36 283 283 HOH HOH . I 4 HOH A 37 284 284 HOH HOH . I 4 HOH A 38 285 285 HOH HOH . I 4 HOH A 39 286 286 HOH HOH . I 4 HOH A 40 287 287 HOH HOH . I 4 HOH A 41 288 288 HOH HOH . I 4 HOH A 42 289 289 HOH HOH . I 4 HOH A 43 290 290 HOH HOH . I 4 HOH A 44 291 291 HOH HOH . I 4 HOH A 45 292 292 HOH HOH . I 4 HOH A 46 293 293 HOH HOH . I 4 HOH A 47 294 294 HOH HOH . I 4 HOH A 48 295 295 HOH HOH . I 4 HOH A 49 296 296 HOH HOH . I 4 HOH A 50 297 297 HOH HOH . I 4 HOH A 51 298 298 HOH HOH . I 4 HOH A 52 299 299 HOH HOH . I 4 HOH A 53 300 300 HOH HOH . I 4 HOH A 54 301 301 HOH HOH . I 4 HOH A 55 302 302 HOH HOH . I 4 HOH A 56 303 303 HOH HOH . I 4 HOH A 57 304 304 HOH HOH . I 4 HOH A 58 305 305 HOH HOH . I 4 HOH A 59 306 306 HOH HOH . I 4 HOH A 60 307 307 HOH HOH . I 4 HOH A 61 308 308 HOH HOH . I 4 HOH A 62 309 309 HOH HOH . I 4 HOH A 63 310 310 HOH HOH . I 4 HOH A 64 311 311 HOH HOH . I 4 HOH A 65 312 312 HOH HOH . I 4 HOH A 66 313 313 HOH HOH . I 4 HOH A 67 314 314 HOH HOH . J 4 HOH B 1 248 248 HOH HOH . J 4 HOH B 2 249 249 HOH HOH . J 4 HOH B 3 250 250 HOH HOH . J 4 HOH B 4 251 251 HOH HOH . J 4 HOH B 5 252 252 HOH HOH . J 4 HOH B 6 253 253 HOH HOH . J 4 HOH B 7 254 254 HOH HOH . J 4 HOH B 8 255 255 HOH HOH . J 4 HOH B 9 256 256 HOH HOH . J 4 HOH B 10 257 257 HOH HOH . J 4 HOH B 11 258 258 HOH HOH . J 4 HOH B 12 259 259 HOH HOH . J 4 HOH B 13 260 260 HOH HOH . J 4 HOH B 14 261 261 HOH HOH . J 4 HOH B 15 262 262 HOH HOH . J 4 HOH B 16 263 263 HOH HOH . J 4 HOH B 17 264 264 HOH HOH . J 4 HOH B 18 265 265 HOH HOH . J 4 HOH B 19 266 266 HOH HOH . J 4 HOH B 20 267 267 HOH HOH . J 4 HOH B 21 268 268 HOH HOH . J 4 HOH B 22 269 269 HOH HOH . J 4 HOH B 23 270 270 HOH HOH . J 4 HOH B 24 271 271 HOH HOH . J 4 HOH B 25 272 272 HOH HOH . J 4 HOH B 26 273 273 HOH HOH . J 4 HOH B 27 274 274 HOH HOH . J 4 HOH B 28 275 275 HOH HOH . J 4 HOH B 29 276 276 HOH HOH . J 4 HOH B 30 277 277 HOH HOH . J 4 HOH B 31 278 278 HOH HOH . J 4 HOH B 32 279 279 HOH HOH . J 4 HOH B 33 280 280 HOH HOH . J 4 HOH B 34 281 281 HOH HOH . J 4 HOH B 35 282 282 HOH HOH . J 4 HOH B 36 283 283 HOH HOH . J 4 HOH B 37 284 284 HOH HOH . J 4 HOH B 38 285 285 HOH HOH . J 4 HOH B 39 286 286 HOH HOH . J 4 HOH B 40 287 287 HOH HOH . J 4 HOH B 41 288 288 HOH HOH . J 4 HOH B 42 289 289 HOH HOH . J 4 HOH B 43 290 290 HOH HOH . J 4 HOH B 44 291 291 HOH HOH . J 4 HOH B 45 292 292 HOH HOH . J 4 HOH B 46 293 293 HOH HOH . J 4 HOH B 47 294 294 HOH HOH . J 4 HOH B 48 295 295 HOH HOH . J 4 HOH B 49 296 296 HOH HOH . J 4 HOH B 50 297 297 HOH HOH . J 4 HOH B 51 298 298 HOH HOH . J 4 HOH B 52 299 299 HOH HOH . J 4 HOH B 53 300 300 HOH HOH . J 4 HOH B 54 301 301 HOH HOH . J 4 HOH B 55 302 302 HOH HOH . J 4 HOH B 56 303 303 HOH HOH . J 4 HOH B 57 304 304 HOH HOH . J 4 HOH B 58 305 305 HOH HOH . K 4 HOH I 1 7 6 HOH HOH . L 4 HOH J 1 7 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 3 22.832 48.161 35.358 1 17.22 ? S SO4 246 A 1 HETATM 2 O O1 SO4 . . . E 3 23.305 48.235 33.961 0.5 9.92 ? O1 SO4 246 A 1 HETATM 3 O O2 SO4 . . . E 3 23.968 48.347 36.279 0.5 6.06 ? O2 SO4 246 A 1 HETATM 4 O O3 SO4 . . . E 3 21.83 49.216 35.607 0.5 10.86 ? O3 SO4 246 A 1 HETATM 5 O O4 SO4 . . . E 3 22.212 46.842 35.589 0.5 9.17 ? O4 SO4 246 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #