data_2RF3
#
_model_server_result.job_id            vyVU4QdT5P34w7_4obD4JQ 
_model_server_result.datetime_utc      '2025-04-22 18:42:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2rf3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":308}' 
#
_entry.id    2RF3 
#
_exptl.entry_id    2RF3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2RF3 
_cell.length_a            26.587 
_cell.length_b            26.587 
_cell.length_c            98.238 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2RF3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        145 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A O3' DG 4 A DG 4 1_555 A P TCY 5 A TCY 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.588 ? 
covale ? covale2 A O3' TCY 5 A TCY 5 1_555 A P DA 6 A DA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.576 ? 
covale ? covale3 B O3' DG 4 B DG 4 1_555 B P TCY 5 B TCY 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.588 ? 
covale ? covale4 B O3' TCY 5 B TCY 5 1_555 B P DA 6 B DA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.578 ? 
metalc ? metalc1 B OP1 DG 12 B DG 12 1_555 C ZN ZN . B ZN 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? 
hydrog WATSON-CRICK hydrog1 A N1 DG 2 A DG 2 1_555 B N3 DC 11 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A N2 DG 2 A DG 2 1_555 B O2 DC 11 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A O6 DG 2 A DG 2 1_555 B N4 DC 11 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A N3 DC 3 A DC 3 1_555 B N1 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A N4 DC 3 A DC 3 1_555 B O6 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A O2 DC 3 A DC 3 1_555 B N2 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 A N1 DG 4 A DG 4 1_555 B N3 DC 9 B DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 A N2 DG 4 A DG 4 1_555 B O2 DC 9 B DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 A O6 DG 4 A DG 4 1_555 B N4 DC 9 B DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 A N1 DA 6 A DA 6 1_555 B N3 DT 7 B DT 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A N6 DA 6 A DA 6 1_555 B O4 DT 7 B DT 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A N3 DT 7 A DT 7 1_555 B N1 DA 6 B DA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 A O4 DT 7 A DT 7 1_555 B N6 DA 6 B DA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 A N3 DC 9 A DC 9 1_555 B N1 DG 4 B DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 A N4 DC 9 A DC 9 1_555 B O6 DG 4 B DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 A O2 DC 9 A DC 9 1_555 B N2 DG 4 B DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 A N1 DG 10 A DG 10 1_555 B N3 DC 3 B DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 A N2 DG 10 A DG 10 1_555 B O2 DC 3 B DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog19 A O6 DG 10 A DG 10 1_555 B N4 DC 3 B DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog20 A N3 DC 11 A DC 11 1_555 B N1 DG 2 B DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog21 A N4 DC 11 A DC 11 1_555 B O6 DG 2 B DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog22 A O2 DC 11 A DC 11 1_555 B N2 DG 2 B DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2RF3 
_atom_sites.fract_transf_matrix[1][1]    0.037612 
_atom_sites.fract_transf_matrix[1][2]    0.021716 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.043431 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010179 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN B 1 308 308 ZN ZN . 
D 3 SPM B 1 309 309 SPM SPM . 
E 4 HOH A 1 209 209 HOH HOH . 
E 4 HOH A 2 210 210 HOH HOH . 
E 4 HOH A 3 218 218 HOH HOH . 
E 4 HOH A 4 219 219 HOH HOH . 
E 4 HOH A 5 220 220 HOH HOH . 
E 4 HOH A 6 221 221 HOH HOH . 
E 4 HOH A 7 224 224 HOH HOH . 
E 4 HOH A 8 225 225 HOH HOH . 
E 4 HOH A 9 226 226 HOH HOH . 
E 4 HOH A 10 227 227 HOH HOH . 
E 4 HOH A 11 228 228 HOH HOH . 
E 4 HOH A 12 229 229 HOH HOH . 
E 4 HOH A 13 233 233 HOH HOH . 
E 4 HOH A 14 234 234 HOH HOH . 
E 4 HOH A 15 235 235 HOH HOH . 
E 4 HOH A 16 239 239 HOH HOH . 
E 4 HOH A 17 240 240 HOH HOH . 
E 4 HOH A 18 243 243 HOH HOH . 
E 4 HOH A 19 244 244 HOH HOH . 
E 4 HOH A 20 245 245 HOH HOH . 
E 4 HOH A 21 246 246 HOH HOH . 
E 4 HOH A 22 247 247 HOH HOH . 
E 4 HOH A 23 262 262 HOH HOH . 
E 4 HOH A 24 263 263 HOH HOH . 
E 4 HOH A 25 264 264 HOH HOH . 
E 4 HOH A 26 265 265 HOH HOH . 
E 4 HOH A 27 268 268 HOH HOH . 
E 4 HOH A 28 269 269 HOH HOH . 
E 4 HOH A 29 270 270 HOH HOH . 
E 4 HOH A 30 271 271 HOH HOH . 
E 4 HOH A 31 272 272 HOH HOH . 
E 4 HOH A 32 273 273 HOH HOH . 
E 4 HOH A 33 274 274 HOH HOH . 
E 4 HOH A 34 275 275 HOH HOH . 
E 4 HOH A 35 276 276 HOH HOH . 
E 4 HOH A 36 277 277 HOH HOH . 
E 4 HOH A 37 279 279 HOH HOH . 
E 4 HOH A 38 289 289 HOH HOH . 
E 4 HOH A 39 290 290 HOH HOH . 
E 4 HOH A 40 296 296 HOH HOH . 
E 4 HOH A 41 297 297 HOH HOH . 
E 4 HOH A 42 299 299 HOH HOH . 
E 4 HOH A 43 301 301 HOH HOH . 
E 4 HOH A 44 302 302 HOH HOH . 
E 4 HOH A 45 303 303 HOH HOH . 
F 4 HOH B 1 201 201 HOH HOH . 
F 4 HOH B 2 203 203 HOH HOH . 
F 4 HOH B 3 204 204 HOH HOH . 
F 4 HOH B 4 205 205 HOH HOH . 
F 4 HOH B 5 206 206 HOH HOH . 
F 4 HOH B 6 207 207 HOH HOH . 
F 4 HOH B 7 208 208 HOH HOH . 
F 4 HOH B 8 211 211 HOH HOH . 
F 4 HOH B 9 212 212 HOH HOH . 
F 4 HOH B 10 213 213 HOH HOH . 
F 4 HOH B 11 214 214 HOH HOH . 
F 4 HOH B 12 215 215 HOH HOH . 
F 4 HOH B 13 216 216 HOH HOH . 
F 4 HOH B 14 217 217 HOH HOH . 
F 4 HOH B 15 222 222 HOH HOH . 
F 4 HOH B 16 223 223 HOH HOH . 
F 4 HOH B 17 231 231 HOH HOH . 
F 4 HOH B 18 232 232 HOH HOH . 
F 4 HOH B 19 236 236 HOH HOH . 
F 4 HOH B 20 237 237 HOH HOH . 
F 4 HOH B 21 238 238 HOH HOH . 
F 4 HOH B 22 241 241 HOH HOH . 
F 4 HOH B 23 242 242 HOH HOH . 
F 4 HOH B 24 249 249 HOH HOH . 
F 4 HOH B 25 251 251 HOH HOH . 
F 4 HOH B 26 252 252 HOH HOH . 
F 4 HOH B 27 253 253 HOH HOH . 
F 4 HOH B 28 254 254 HOH HOH . 
F 4 HOH B 29 255 255 HOH HOH . 
F 4 HOH B 30 256 256 HOH HOH . 
F 4 HOH B 31 257 257 HOH HOH . 
F 4 HOH B 32 259 259 HOH HOH . 
F 4 HOH B 33 260 260 HOH HOH . 
F 4 HOH B 34 266 266 HOH HOH . 
F 4 HOH B 35 278 278 HOH HOH . 
F 4 HOH B 36 281 281 HOH HOH . 
F 4 HOH B 37 285 285 HOH HOH . 
F 4 HOH B 38 286 286 HOH HOH . 
F 4 HOH B 39 288 288 HOH HOH . 
F 4 HOH B 40 291 291 HOH HOH . 
F 4 HOH B 41 292 292 HOH HOH . 
F 4 HOH B 42 293 293 HOH HOH . 
F 4 HOH B 43 294 294 HOH HOH . 
F 4 HOH B 44 298 298 HOH HOH . 
F 4 HOH B 45 304 304 HOH HOH . 
F 4 HOH B 46 305 305 HOH HOH . 
F 4 HOH B 47 306 306 HOH HOH . 
F 4 HOH B 48 307 307 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               1.924 
_atom_site.Cartn_y               14.226 
_atom_site.Cartn_z               48.925 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        26.85 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           308 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              44 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#