data_2RGA # _model_server_result.job_id BCuvBpKibBjlvYKDD3E9dQ _model_server_result.datetime_utc '2024-11-02 18:29:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2rga # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 2RGA # _exptl.entry_id 2RGA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2RGA _cell.length_a 88.342 _cell.length_b 88.342 _cell.length_c 133.419 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RGA _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 17 A SER 17 1_555 D MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc2 A OE2 GLU 31 A GLU 31 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc3 A OD1 ASP 33 A ASP 33 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc4 A OD2 ASP 33 A ASP 33 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc5 A OG1 THR 35 A THR 35 1_555 D MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc6 E O2B GNP . A GNP 528 1_555 D MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc7 E O2G GNP . A GNP 528 1_555 D MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc8 B CA CA . A CA 601 1_555 F O HOH . A HOH 686 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc9 B CA CA . A CA 601 1_555 F O HOH . A HOH 687 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc10 C MG MG . A MG 602 1_555 F O HOH . A HOH 688 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc11 C MG MG . A MG 602 1_555 F O HOH . A HOH 689 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc12 D MG MG . A MG 603 1_555 F O HOH . A HOH 669 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc13 D MG MG . A MG 603 1_555 F O HOH . A HOH 670 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2RGA _atom_sites.fract_transf_matrix[1][1] 0.01132 _atom_sites.fract_transf_matrix[1][2] 0.006535 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013071 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007495 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 601 1 CA CA . C 3 MG A 1 602 2 MG MG . D 3 MG A 1 603 3 MG MG . E 4 GNP A 1 528 528 GNP GNP . F 5 HOH A 1 604 529 HOH HOH . F 5 HOH A 2 605 530 HOH HOH . F 5 HOH A 3 606 531 HOH HOH . F 5 HOH A 4 607 532 HOH HOH . F 5 HOH A 5 608 533 HOH HOH . F 5 HOH A 6 609 534 HOH HOH . F 5 HOH A 7 610 535 HOH HOH . F 5 HOH A 8 611 536 HOH HOH . F 5 HOH A 9 612 537 HOH HOH . F 5 HOH A 10 613 538 HOH HOH . F 5 HOH A 11 614 539 HOH HOH . F 5 HOH A 12 615 540 HOH HOH . F 5 HOH A 13 616 541 HOH HOH . F 5 HOH A 14 617 542 HOH HOH . F 5 HOH A 15 618 543 HOH HOH . F 5 HOH A 16 619 544 HOH HOH . F 5 HOH A 17 620 545 HOH HOH . F 5 HOH A 18 621 546 HOH HOH . F 5 HOH A 19 622 547 HOH HOH . F 5 HOH A 20 623 548 HOH HOH . F 5 HOH A 21 624 549 HOH HOH . F 5 HOH A 22 625 550 HOH HOH . F 5 HOH A 23 626 552 HOH HOH . F 5 HOH A 24 627 553 HOH HOH . F 5 HOH A 25 628 554 HOH HOH . F 5 HOH A 26 629 555 HOH HOH . F 5 HOH A 27 630 556 HOH HOH . F 5 HOH A 28 631 557 HOH HOH . F 5 HOH A 29 632 558 HOH HOH . F 5 HOH A 30 633 559 HOH HOH . F 5 HOH A 31 634 560 HOH HOH . F 5 HOH A 32 635 561 HOH HOH . F 5 HOH A 33 636 562 HOH HOH . F 5 HOH A 34 637 563 HOH HOH . F 5 HOH A 35 638 564 HOH HOH . F 5 HOH A 36 639 565 HOH HOH . F 5 HOH A 37 640 566 HOH HOH . F 5 HOH A 38 641 567 HOH HOH . F 5 HOH A 39 642 568 HOH HOH . F 5 HOH A 40 643 569 HOH HOH . F 5 HOH A 41 644 570 HOH HOH . F 5 HOH A 42 645 572 HOH HOH . F 5 HOH A 43 646 573 HOH HOH . F 5 HOH A 44 647 574 HOH HOH . F 5 HOH A 45 648 575 HOH HOH . F 5 HOH A 46 649 576 HOH HOH . F 5 HOH A 47 650 577 HOH HOH . F 5 HOH A 48 651 578 HOH HOH . F 5 HOH A 49 652 579 HOH HOH . F 5 HOH A 50 653 581 HOH HOH . F 5 HOH A 51 654 582 HOH HOH . F 5 HOH A 52 655 583 HOH HOH . F 5 HOH A 53 656 584 HOH HOH . F 5 HOH A 54 657 585 HOH HOH . F 5 HOH A 55 658 586 HOH HOH . F 5 HOH A 56 659 587 HOH HOH . F 5 HOH A 57 660 588 HOH HOH . F 5 HOH A 58 661 589 HOH HOH . F 5 HOH A 59 662 592 HOH HOH . F 5 HOH A 60 663 593 HOH HOH . F 5 HOH A 61 664 594 HOH HOH . F 5 HOH A 62 665 595 HOH HOH . F 5 HOH A 63 666 599 HOH HOH . F 5 HOH A 64 667 600 HOH HOH . F 5 HOH A 65 668 601 HOH HOH . F 5 HOH A 66 669 602 HOH HOH . F 5 HOH A 67 670 603 HOH HOH . F 5 HOH A 68 671 604 HOH HOH . F 5 HOH A 69 672 605 HOH HOH . F 5 HOH A 70 673 606 HOH HOH . F 5 HOH A 71 674 607 HOH HOH . F 5 HOH A 72 675 608 HOH HOH . F 5 HOH A 73 676 609 HOH HOH . F 5 HOH A 74 677 610 HOH HOH . F 5 HOH A 75 678 611 HOH HOH . F 5 HOH A 76 679 612 HOH HOH . F 5 HOH A 77 680 613 HOH HOH . F 5 HOH A 78 681 614 HOH HOH . F 5 HOH A 79 682 615 HOH HOH . F 5 HOH A 80 683 616 HOH HOH . F 5 HOH A 81 684 617 HOH HOH . F 5 HOH A 82 685 618 HOH HOH . F 5 HOH A 83 686 619 HOH HOH . F 5 HOH A 84 687 620 HOH HOH . F 5 HOH A 85 688 621 HOH HOH . F 5 HOH A 86 689 622 HOH HOH . F 5 HOH A 87 690 623 HOH HOH . F 5 HOH A 88 691 624 HOH HOH . F 5 HOH A 89 692 625 HOH HOH . F 5 HOH A 90 693 626 HOH HOH . F 5 HOH A 91 694 627 HOH HOH . F 5 HOH A 92 695 628 HOH HOH . F 5 HOH A 93 696 629 HOH HOH . F 5 HOH A 94 697 630 HOH HOH . F 5 HOH A 95 698 631 HOH HOH . F 5 HOH A 96 699 632 HOH HOH . F 5 HOH A 97 700 633 HOH HOH . F 5 HOH A 98 701 634 HOH HOH . F 5 HOH A 99 702 635 HOH HOH . F 5 HOH A 100 703 636 HOH HOH . F 5 HOH A 101 704 637 HOH HOH . F 5 HOH A 102 705 638 HOH HOH . F 5 HOH A 103 706 639 HOH HOH . F 5 HOH A 104 707 640 HOH HOH . F 5 HOH A 105 708 641 HOH HOH . F 5 HOH A 106 709 642 HOH HOH . F 5 HOH A 107 710 643 HOH HOH . F 5 HOH A 108 711 644 HOH HOH . F 5 HOH A 109 712 645 HOH HOH . F 5 HOH A 110 713 646 HOH HOH . F 5 HOH A 111 714 647 HOH HOH . F 5 HOH A 112 715 648 HOH HOH . F 5 HOH A 113 716 649 HOH HOH . F 5 HOH A 114 717 650 HOH HOH . F 5 HOH A 115 718 651 HOH HOH . F 5 HOH A 116 719 652 HOH HOH . F 5 HOH A 117 720 653 HOH HOH . F 5 HOH A 118 721 654 HOH HOH . F 5 HOH A 119 722 655 HOH HOH . F 5 HOH A 120 723 656 HOH HOH . F 5 HOH A 121 724 657 HOH HOH . F 5 HOH A 122 725 658 HOH HOH . F 5 HOH A 123 726 659 HOH HOH . F 5 HOH A 124 727 660 HOH HOH . F 5 HOH A 125 728 661 HOH HOH . F 5 HOH A 126 729 662 HOH HOH . F 5 HOH A 127 730 663 HOH HOH . F 5 HOH A 128 731 664 HOH HOH . F 5 HOH A 129 732 665 HOH HOH . F 5 HOH A 130 733 666 HOH HOH . F 5 HOH A 131 734 667 HOH HOH . F 5 HOH A 132 735 668 HOH HOH . F 5 HOH A 133 736 669 HOH HOH . F 5 HOH A 134 737 670 HOH HOH . F 5 HOH A 135 738 671 HOH HOH . F 5 HOH A 136 739 672 HOH HOH . F 5 HOH A 137 740 673 HOH HOH . F 5 HOH A 138 741 674 HOH HOH . F 5 HOH A 139 742 675 HOH HOH . F 5 HOH A 140 743 676 HOH HOH . F 5 HOH A 141 744 677 HOH HOH . F 5 HOH A 142 745 678 HOH HOH . F 5 HOH A 143 746 679 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -4.563 _atom_site.Cartn_y 74.22 _atom_site.Cartn_z -61.675 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.61 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #