data_2RGB # _model_server_result.job_id aWzqapRoFQoNcIVK2WsPNQ _model_server_result.datetime_utc '2024-11-28 00:43:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2rgb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 2RGB # _exptl.entry_id 2RGB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2RGB _cell.length_a 88.695 _cell.length_b 88.695 _cell.length_c 133.529 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RGB _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 17 A SER 17 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc2 A OE2 GLU 31 A GLU 31 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc3 A OD1 ASP 33 A ASP 33 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc4 A OD2 ASP 33 A ASP 33 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc5 A OG1 THR 35 A THR 35 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc6 E O2B GNP . A GNP 528 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc7 E O2G GNP . A GNP 528 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc8 B CA CA . A CA 601 1_555 F O HOH . A HOH 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc9 B CA CA . A CA 601 1_555 F O HOH . A HOH 645 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc10 C MG MG . A MG 602 1_555 F O HOH . A HOH 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc11 C MG MG . A MG 602 1_555 F O HOH . A HOH 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc12 D MG MG . A MG 603 1_555 F O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc13 D MG MG . A MG 603 1_555 F O HOH . A HOH 639 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2RGB _atom_sites.fract_transf_matrix[1][1] 0.011275 _atom_sites.fract_transf_matrix[1][2] 0.006509 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013019 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007489 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 601 1 CA CA . C 3 MG A 1 602 2 MG MG . D 3 MG A 1 603 3 MG MG . E 4 GNP A 1 528 528 GNP GNP . F 5 HOH A 1 604 529 HOH HOH . F 5 HOH A 2 605 530 HOH HOH . F 5 HOH A 3 606 531 HOH HOH . F 5 HOH A 4 607 532 HOH HOH . F 5 HOH A 5 608 533 HOH HOH . F 5 HOH A 6 609 534 HOH HOH . F 5 HOH A 7 610 535 HOH HOH . F 5 HOH A 8 611 536 HOH HOH . F 5 HOH A 9 612 537 HOH HOH . F 5 HOH A 10 613 538 HOH HOH . F 5 HOH A 11 614 539 HOH HOH . F 5 HOH A 12 615 540 HOH HOH . F 5 HOH A 13 616 541 HOH HOH . F 5 HOH A 14 617 542 HOH HOH . F 5 HOH A 15 618 543 HOH HOH . F 5 HOH A 16 619 544 HOH HOH . F 5 HOH A 17 620 545 HOH HOH . F 5 HOH A 18 621 546 HOH HOH . F 5 HOH A 19 622 547 HOH HOH . F 5 HOH A 20 623 548 HOH HOH . F 5 HOH A 21 624 549 HOH HOH . F 5 HOH A 22 625 550 HOH HOH . F 5 HOH A 23 626 551 HOH HOH . F 5 HOH A 24 627 552 HOH HOH . F 5 HOH A 25 628 553 HOH HOH . F 5 HOH A 26 629 554 HOH HOH . F 5 HOH A 27 630 556 HOH HOH . F 5 HOH A 28 631 557 HOH HOH . F 5 HOH A 29 632 558 HOH HOH . F 5 HOH A 30 633 559 HOH HOH . F 5 HOH A 31 634 561 HOH HOH . F 5 HOH A 32 635 562 HOH HOH . F 5 HOH A 33 636 563 HOH HOH . F 5 HOH A 34 637 564 HOH HOH . F 5 HOH A 35 638 565 HOH HOH . F 5 HOH A 36 639 566 HOH HOH . F 5 HOH A 37 640 567 HOH HOH . F 5 HOH A 38 641 568 HOH HOH . F 5 HOH A 39 642 569 HOH HOH . F 5 HOH A 40 643 570 HOH HOH . F 5 HOH A 41 644 571 HOH HOH . F 5 HOH A 42 645 572 HOH HOH . F 5 HOH A 43 646 573 HOH HOH . F 5 HOH A 44 647 574 HOH HOH . F 5 HOH A 45 648 575 HOH HOH . F 5 HOH A 46 649 576 HOH HOH . F 5 HOH A 47 650 577 HOH HOH . F 5 HOH A 48 651 579 HOH HOH . F 5 HOH A 49 652 580 HOH HOH . F 5 HOH A 50 653 581 HOH HOH . F 5 HOH A 51 654 582 HOH HOH . F 5 HOH A 52 655 583 HOH HOH . F 5 HOH A 53 656 585 HOH HOH . F 5 HOH A 54 657 586 HOH HOH . F 5 HOH A 55 658 587 HOH HOH . F 5 HOH A 56 659 588 HOH HOH . F 5 HOH A 57 660 589 HOH HOH . F 5 HOH A 58 661 590 HOH HOH . F 5 HOH A 59 662 592 HOH HOH . F 5 HOH A 60 663 593 HOH HOH . F 5 HOH A 61 664 594 HOH HOH . F 5 HOH A 62 665 596 HOH HOH . F 5 HOH A 63 666 597 HOH HOH . F 5 HOH A 64 667 598 HOH HOH . F 5 HOH A 65 668 599 HOH HOH . F 5 HOH A 66 669 601 HOH HOH . F 5 HOH A 67 670 602 HOH HOH . F 5 HOH A 68 671 603 HOH HOH . F 5 HOH A 69 672 604 HOH HOH . F 5 HOH A 70 673 605 HOH HOH . F 5 HOH A 71 674 606 HOH HOH . F 5 HOH A 72 675 607 HOH HOH . F 5 HOH A 73 676 608 HOH HOH . F 5 HOH A 74 677 609 HOH HOH . F 5 HOH A 75 678 610 HOH HOH . F 5 HOH A 76 679 611 HOH HOH . F 5 HOH A 77 680 613 HOH HOH . F 5 HOH A 78 681 614 HOH HOH . F 5 HOH A 79 682 615 HOH HOH . F 5 HOH A 80 683 616 HOH HOH . F 5 HOH A 81 684 618 HOH HOH . F 5 HOH A 82 685 619 HOH HOH . F 5 HOH A 83 686 620 HOH HOH . F 5 HOH A 84 687 621 HOH HOH . F 5 HOH A 85 688 622 HOH HOH . F 5 HOH A 86 689 623 HOH HOH . F 5 HOH A 87 690 626 HOH HOH . F 5 HOH A 88 691 627 HOH HOH . F 5 HOH A 89 692 628 HOH HOH . F 5 HOH A 90 693 629 HOH HOH . F 5 HOH A 91 694 630 HOH HOH . F 5 HOH A 92 695 633 HOH HOH . F 5 HOH A 93 696 634 HOH HOH . F 5 HOH A 94 697 635 HOH HOH . F 5 HOH A 95 698 636 HOH HOH . F 5 HOH A 96 699 637 HOH HOH . F 5 HOH A 97 700 639 HOH HOH . F 5 HOH A 98 701 640 HOH HOH . F 5 HOH A 99 702 641 HOH HOH . F 5 HOH A 100 703 643 HOH HOH . F 5 HOH A 101 704 644 HOH HOH . F 5 HOH A 102 705 645 HOH HOH . F 5 HOH A 103 706 646 HOH HOH . F 5 HOH A 104 707 647 HOH HOH . F 5 HOH A 105 708 648 HOH HOH . F 5 HOH A 106 709 649 HOH HOH . F 5 HOH A 107 710 650 HOH HOH . F 5 HOH A 108 711 651 HOH HOH . F 5 HOH A 109 712 652 HOH HOH . F 5 HOH A 110 713 653 HOH HOH . F 5 HOH A 111 714 654 HOH HOH . F 5 HOH A 112 715 655 HOH HOH . F 5 HOH A 113 716 656 HOH HOH . F 5 HOH A 114 717 657 HOH HOH . F 5 HOH A 115 718 658 HOH HOH . F 5 HOH A 116 719 659 HOH HOH . F 5 HOH A 117 720 661 HOH HOH . F 5 HOH A 118 721 662 HOH HOH . F 5 HOH A 119 722 663 HOH HOH . F 5 HOH A 120 723 664 HOH HOH . F 5 HOH A 121 724 665 HOH HOH . F 5 HOH A 122 725 666 HOH HOH . F 5 HOH A 123 726 667 HOH HOH . F 5 HOH A 124 727 668 HOH HOH . F 5 HOH A 125 728 669 HOH HOH . F 5 HOH A 126 729 670 HOH HOH . F 5 HOH A 127 730 671 HOH HOH . F 5 HOH A 128 731 672 HOH HOH . F 5 HOH A 129 732 673 HOH HOH . F 5 HOH A 130 733 674 HOH HOH . F 5 HOH A 131 734 675 HOH HOH . F 5 HOH A 132 735 676 HOH HOH . F 5 HOH A 133 736 677 HOH HOH . F 5 HOH A 134 737 678 HOH HOH . F 5 HOH A 135 738 679 HOH HOH . F 5 HOH A 136 739 680 HOH HOH . F 5 HOH A 137 740 681 HOH HOH . F 5 HOH A 138 741 682 HOH HOH . F 5 HOH A 139 742 683 HOH HOH . F 5 HOH A 140 743 684 HOH HOH . F 5 HOH A 141 744 685 HOH HOH . F 5 HOH A 142 745 686 HOH HOH . F 5 HOH A 143 746 687 HOH HOH . F 5 HOH A 144 747 688 HOH HOH . F 5 HOH A 145 748 689 HOH HOH . F 5 HOH A 146 749 690 HOH HOH . F 5 HOH A 147 750 691 HOH HOH . F 5 HOH A 148 751 692 HOH HOH . F 5 HOH A 149 752 693 HOH HOH . F 5 HOH A 150 753 694 HOH HOH . F 5 HOH A 151 754 695 HOH HOH . F 5 HOH A 152 755 696 HOH HOH . F 5 HOH A 153 756 697 HOH HOH . F 5 HOH A 154 757 698 HOH HOH . F 5 HOH A 155 758 699 HOH HOH . F 5 HOH A 156 759 700 HOH HOH . F 5 HOH A 157 760 701 HOH HOH . F 5 HOH A 158 761 702 HOH HOH . F 5 HOH A 159 762 703 HOH HOH . F 5 HOH A 160 763 704 HOH HOH . F 5 HOH A 161 764 705 HOH HOH . F 5 HOH A 162 765 706 HOH HOH . F 5 HOH A 163 766 707 HOH HOH . F 5 HOH A 164 767 708 HOH HOH . F 5 HOH A 165 768 709 HOH HOH . F 5 HOH A 166 769 710 HOH HOH . F 5 HOH A 167 770 711 HOH HOH . F 5 HOH A 168 771 712 HOH HOH . F 5 HOH A 169 772 713 HOH HOH . F 5 HOH A 170 773 714 HOH HOH . F 5 HOH A 171 774 715 HOH HOH . F 5 HOH A 172 775 716 HOH HOH . F 5 HOH A 173 776 717 HOH HOH . F 5 HOH A 174 777 718 HOH HOH . F 5 HOH A 175 778 719 HOH HOH . F 5 HOH A 176 779 720 HOH HOH . F 5 HOH A 177 780 721 HOH HOH . F 5 HOH A 178 781 722 HOH HOH . F 5 HOH A 179 782 723 HOH HOH . F 5 HOH A 180 783 724 HOH HOH . F 5 HOH A 181 784 725 HOH HOH . F 5 HOH A 182 785 726 HOH HOH . F 5 HOH A 183 786 727 HOH HOH . F 5 HOH A 184 787 728 HOH HOH . F 5 HOH A 185 788 729 HOH HOH . F 5 HOH A 186 789 730 HOH HOH . F 5 HOH A 187 790 731 HOH HOH . F 5 HOH A 188 791 732 HOH HOH . F 5 HOH A 189 792 733 HOH HOH . F 5 HOH A 190 793 734 HOH HOH . F 5 HOH A 191 794 735 HOH HOH . F 5 HOH A 192 795 736 HOH HOH . F 5 HOH A 193 796 737 HOH HOH . F 5 HOH A 194 797 738 HOH HOH . F 5 HOH A 195 798 739 HOH HOH . F 5 HOH A 196 799 740 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -4.684 _atom_site.Cartn_y 74.498 _atom_site.Cartn_z -61.685 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #