data_2RGE # _model_server_result.job_id k7wCcjnYLoLZ33qKlzEbdg _model_server_result.datetime_utc '2024-11-27 22:18:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2rge # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 2RGE # _exptl.entry_id 2RGE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2RGE _cell.length_a 89.633 _cell.length_b 89.633 _cell.length_c 134.508 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RGE _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 17 A SER 17 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc2 A OE2 GLU 31 A GLU 31 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc3 A OD1 ASP 33 A ASP 33 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc4 A OD2 ASP 33 A ASP 33 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc5 A OG1 THR 35 A THR 35 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc6 E O2B GNP . A GNP 528 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc7 E O2G GNP . A GNP 528 1_555 C MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc8 B CA CA . A CA 601 1_555 F O HOH . A HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc9 B CA CA . A CA 601 1_555 F O HOH . A HOH 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc10 C MG MG . A MG 602 1_555 F O HOH . A HOH 657 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc11 C MG MG . A MG 602 1_555 F O HOH . A HOH 658 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc12 D MG MG . A MG 603 1_555 F O HOH . A HOH 656 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc13 D MG MG . A MG 603 1_555 F O HOH . A HOH 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2RGE _atom_sites.fract_transf_matrix[1][1] 0.011157 _atom_sites.fract_transf_matrix[1][2] 0.006441 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012883 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007435 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 601 1 CA CA . C 3 MG A 1 602 2 MG MG . D 3 MG A 1 603 3 MG MG . E 4 GNP A 1 528 528 GNP GNP . F 5 HOH A 1 604 1 HOH HOH . F 5 HOH A 2 605 2 HOH HOH . F 5 HOH A 3 606 3 HOH HOH . F 5 HOH A 4 607 4 HOH HOH . F 5 HOH A 5 608 5 HOH HOH . F 5 HOH A 6 609 6 HOH HOH . F 5 HOH A 7 610 7 HOH HOH . F 5 HOH A 8 611 8 HOH HOH . F 5 HOH A 9 612 9 HOH HOH . F 5 HOH A 10 613 10 HOH HOH . F 5 HOH A 11 614 11 HOH HOH . F 5 HOH A 12 615 12 HOH HOH . F 5 HOH A 13 616 13 HOH HOH . F 5 HOH A 14 617 14 HOH HOH . F 5 HOH A 15 618 15 HOH HOH . F 5 HOH A 16 619 16 HOH HOH . F 5 HOH A 17 620 17 HOH HOH . F 5 HOH A 18 621 18 HOH HOH . F 5 HOH A 19 622 19 HOH HOH . F 5 HOH A 20 623 20 HOH HOH . F 5 HOH A 21 624 21 HOH HOH . F 5 HOH A 22 625 22 HOH HOH . F 5 HOH A 23 626 25 HOH HOH . F 5 HOH A 24 627 26 HOH HOH . F 5 HOH A 25 628 27 HOH HOH . F 5 HOH A 26 629 28 HOH HOH . F 5 HOH A 27 630 29 HOH HOH . F 5 HOH A 28 631 30 HOH HOH . F 5 HOH A 29 632 31 HOH HOH . F 5 HOH A 30 633 32 HOH HOH . F 5 HOH A 31 634 33 HOH HOH . F 5 HOH A 32 635 35 HOH HOH . F 5 HOH A 33 636 36 HOH HOH . F 5 HOH A 34 637 37 HOH HOH . F 5 HOH A 35 638 38 HOH HOH . F 5 HOH A 36 639 39 HOH HOH . F 5 HOH A 37 640 41 HOH HOH . F 5 HOH A 38 641 42 HOH HOH . F 5 HOH A 39 642 43 HOH HOH . F 5 HOH A 40 643 44 HOH HOH . F 5 HOH A 41 644 45 HOH HOH . F 5 HOH A 42 645 46 HOH HOH . F 5 HOH A 43 646 49 HOH HOH . F 5 HOH A 44 647 50 HOH HOH . F 5 HOH A 45 648 51 HOH HOH . F 5 HOH A 46 649 54 HOH HOH . F 5 HOH A 47 650 55 HOH HOH . F 5 HOH A 48 651 56 HOH HOH . F 5 HOH A 49 652 59 HOH HOH . F 5 HOH A 50 653 60 HOH HOH . F 5 HOH A 51 654 62 HOH HOH . F 5 HOH A 52 655 63 HOH HOH . F 5 HOH A 53 656 66 HOH HOH . F 5 HOH A 54 657 67 HOH HOH . F 5 HOH A 55 658 68 HOH HOH . F 5 HOH A 56 659 70 HOH HOH . F 5 HOH A 57 660 72 HOH HOH . F 5 HOH A 58 661 73 HOH HOH . F 5 HOH A 59 662 74 HOH HOH . F 5 HOH A 60 663 75 HOH HOH . F 5 HOH A 61 664 77 HOH HOH . F 5 HOH A 62 665 78 HOH HOH . F 5 HOH A 63 666 79 HOH HOH . F 5 HOH A 64 667 80 HOH HOH . F 5 HOH A 65 668 81 HOH HOH . F 5 HOH A 66 669 82 HOH HOH . F 5 HOH A 67 670 84 HOH HOH . F 5 HOH A 68 671 85 HOH HOH . F 5 HOH A 69 672 86 HOH HOH . F 5 HOH A 70 673 88 HOH HOH . F 5 HOH A 71 674 89 HOH HOH . F 5 HOH A 72 675 90 HOH HOH . F 5 HOH A 73 676 91 HOH HOH . F 5 HOH A 74 677 94 HOH HOH . F 5 HOH A 75 678 95 HOH HOH . F 5 HOH A 76 679 96 HOH HOH . F 5 HOH A 77 680 98 HOH HOH . F 5 HOH A 78 681 102 HOH HOH . F 5 HOH A 79 682 103 HOH HOH . F 5 HOH A 80 683 106 HOH HOH . F 5 HOH A 81 684 107 HOH HOH . F 5 HOH A 82 685 108 HOH HOH . F 5 HOH A 83 686 109 HOH HOH . F 5 HOH A 84 687 110 HOH HOH . F 5 HOH A 85 688 111 HOH HOH . F 5 HOH A 86 689 113 HOH HOH . F 5 HOH A 87 690 114 HOH HOH . F 5 HOH A 88 691 115 HOH HOH . F 5 HOH A 89 692 116 HOH HOH . F 5 HOH A 90 693 117 HOH HOH . F 5 HOH A 91 694 118 HOH HOH . F 5 HOH A 92 695 119 HOH HOH . F 5 HOH A 93 696 120 HOH HOH . F 5 HOH A 94 697 121 HOH HOH . F 5 HOH A 95 698 122 HOH HOH . F 5 HOH A 96 699 124 HOH HOH . F 5 HOH A 97 700 125 HOH HOH . F 5 HOH A 98 701 126 HOH HOH . F 5 HOH A 99 702 128 HOH HOH . F 5 HOH A 100 703 129 HOH HOH . F 5 HOH A 101 704 130 HOH HOH . F 5 HOH A 102 705 131 HOH HOH . F 5 HOH A 103 706 132 HOH HOH . F 5 HOH A 104 707 133 HOH HOH . F 5 HOH A 105 708 134 HOH HOH . F 5 HOH A 106 709 135 HOH HOH . F 5 HOH A 107 710 136 HOH HOH . F 5 HOH A 108 711 137 HOH HOH . F 5 HOH A 109 712 138 HOH HOH . F 5 HOH A 110 713 140 HOH HOH . F 5 HOH A 111 714 141 HOH HOH . F 5 HOH A 112 715 142 HOH HOH . F 5 HOH A 113 716 143 HOH HOH . F 5 HOH A 114 717 144 HOH HOH . F 5 HOH A 115 718 145 HOH HOH . F 5 HOH A 116 719 146 HOH HOH . F 5 HOH A 117 720 147 HOH HOH . F 5 HOH A 118 721 148 HOH HOH . F 5 HOH A 119 722 149 HOH HOH . F 5 HOH A 120 723 151 HOH HOH . F 5 HOH A 121 724 152 HOH HOH . F 5 HOH A 122 725 153 HOH HOH . F 5 HOH A 123 726 154 HOH HOH . F 5 HOH A 124 727 155 HOH HOH . F 5 HOH A 125 728 158 HOH HOH . F 5 HOH A 126 729 159 HOH HOH . F 5 HOH A 127 730 160 HOH HOH . F 5 HOH A 128 731 161 HOH HOH . F 5 HOH A 129 732 162 HOH HOH . F 5 HOH A 130 733 163 HOH HOH . F 5 HOH A 131 734 164 HOH HOH . F 5 HOH A 132 735 165 HOH HOH . F 5 HOH A 133 736 166 HOH HOH . F 5 HOH A 134 737 167 HOH HOH . F 5 HOH A 135 738 168 HOH HOH . F 5 HOH A 136 739 169 HOH HOH . F 5 HOH A 137 740 170 HOH HOH . F 5 HOH A 138 741 172 HOH HOH . F 5 HOH A 139 742 173 HOH HOH . F 5 HOH A 140 743 174 HOH HOH . F 5 HOH A 141 744 175 HOH HOH . F 5 HOH A 142 745 177 HOH HOH . F 5 HOH A 143 746 178 HOH HOH . F 5 HOH A 144 747 179 HOH HOH . F 5 HOH A 145 748 180 HOH HOH . F 5 HOH A 146 749 182 HOH HOH . F 5 HOH A 147 750 184 HOH HOH . F 5 HOH A 148 751 186 HOH HOH . F 5 HOH A 149 752 189 HOH HOH . F 5 HOH A 150 753 190 HOH HOH . F 5 HOH A 151 754 191 HOH HOH . F 5 HOH A 152 755 192 HOH HOH . F 5 HOH A 153 756 193 HOH HOH . F 5 HOH A 154 757 194 HOH HOH . F 5 HOH A 155 758 195 HOH HOH . F 5 HOH A 156 759 196 HOH HOH . F 5 HOH A 157 760 197 HOH HOH . F 5 HOH A 158 761 198 HOH HOH . F 5 HOH A 159 762 199 HOH HOH . F 5 HOH A 160 763 200 HOH HOH . F 5 HOH A 161 764 201 HOH HOH . F 5 HOH A 162 765 202 HOH HOH . F 5 HOH A 163 766 203 HOH HOH . F 5 HOH A 164 767 204 HOH HOH . F 5 HOH A 165 768 205 HOH HOH . F 5 HOH A 166 769 206 HOH HOH . F 5 HOH A 167 770 207 HOH HOH . F 5 HOH A 168 771 208 HOH HOH . F 5 HOH A 169 772 209 HOH HOH . F 5 HOH A 170 773 210 HOH HOH . F 5 HOH A 171 774 211 HOH HOH . F 5 HOH A 172 775 212 HOH HOH . F 5 HOH A 173 776 213 HOH HOH . F 5 HOH A 174 777 214 HOH HOH . F 5 HOH A 175 778 215 HOH HOH . F 5 HOH A 176 779 216 HOH HOH . F 5 HOH A 177 780 217 HOH HOH . F 5 HOH A 178 781 218 HOH HOH . F 5 HOH A 179 782 219 HOH HOH . F 5 HOH A 180 783 220 HOH HOH . F 5 HOH A 181 784 221 HOH HOH . F 5 HOH A 182 785 222 HOH HOH . F 5 HOH A 183 786 223 HOH HOH . F 5 HOH A 184 787 224 HOH HOH . F 5 HOH A 185 788 225 HOH HOH . F 5 HOH A 186 789 226 HOH HOH . F 5 HOH A 187 790 227 HOH HOH . F 5 HOH A 188 791 228 HOH HOH . F 5 HOH A 189 792 229 HOH HOH . F 5 HOH A 190 793 230 HOH HOH . F 5 HOH A 191 794 231 HOH HOH . F 5 HOH A 192 795 232 HOH HOH . F 5 HOH A 193 796 233 HOH HOH . F 5 HOH A 194 797 234 HOH HOH . F 5 HOH A 195 798 235 HOH HOH . F 5 HOH A 196 799 236 HOH HOH . F 5 HOH A 197 800 237 HOH HOH . F 5 HOH A 198 801 238 HOH HOH . F 5 HOH A 199 802 239 HOH HOH . F 5 HOH A 200 803 240 HOH HOH . F 5 HOH A 201 804 241 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -4.81 _atom_site.Cartn_y 75.398 _atom_site.Cartn_z -62.143 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.5 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #