data_2RGJ # _model_server_result.job_id 8b1SVkfBnbOmjdUHczFohw _model_server_result.datetime_utc '2024-11-05 01:14:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2rgj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":403}' # _entry.id 2RGJ # _exptl.entry_id 2RGJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2RGJ _cell.length_a 63.5 _cell.length_b 64.86 _cell.length_c 182.02 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RGJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLN 110 A GLN 110 1_555 A N MSE 111 A MSE 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale2 A C MSE 111 A MSE 111 1_555 A N ILE 112 A ILE 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C THR 188 A THR 188 1_555 A N MSE 189 A MSE 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale4 A C MSE 189 A MSE 189 1_555 A N TRP 190 A TRP 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale5 A C THR 204 A THR 204 1_555 A N MSE 205 A MSE 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale6 A C MSE 205 A MSE 205 1_555 A N ILE 206 A ILE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale7 A C CYS 237 A CYS 237 1_555 A N MSE 238 A MSE 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 A C MSE 238 A MSE 238 1_555 A N VAL 239 A VAL 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale9 A C PRO 290 A PRO 290 1_555 A N MSE 291 A MSE 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale10 A C MSE 291 A MSE 291 1_555 A N VAL 292 A VAL 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale11 A C LEU 314 A LEU 314 1_555 A N MSE 315 A MSE 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale12 A C MSE 315 A MSE 315 1_555 A N TYR 316 A TYR 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale13 A C PRO 317 A PRO 317 1_555 A N MSE 318 A MSE 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale14 A C MSE 318 A MSE 318 1_555 A N GLY 319 A GLY 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2RGJ _atom_sites.fract_transf_matrix[1][1] 0.015748 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015418 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005494 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 403 403 FAD FAD . C 3 HOH A 1 404 404 HOH HOH . C 3 HOH A 2 405 405 HOH HOH . C 3 HOH A 3 406 406 HOH HOH . C 3 HOH A 4 407 407 HOH HOH . C 3 HOH A 5 408 408 HOH HOH . C 3 HOH A 6 409 409 HOH HOH . C 3 HOH A 7 410 410 HOH HOH . C 3 HOH A 8 411 411 HOH HOH . C 3 HOH A 9 412 412 HOH HOH . C 3 HOH A 10 413 413 HOH HOH . C 3 HOH A 11 414 414 HOH HOH . C 3 HOH A 12 415 415 HOH HOH . C 3 HOH A 13 416 416 HOH HOH . C 3 HOH A 14 417 417 HOH HOH . C 3 HOH A 15 418 418 HOH HOH . C 3 HOH A 16 419 419 HOH HOH . C 3 HOH A 17 420 420 HOH HOH . C 3 HOH A 18 421 421 HOH HOH . C 3 HOH A 19 422 422 HOH HOH . C 3 HOH A 20 423 423 HOH HOH . C 3 HOH A 21 424 424 HOH HOH . C 3 HOH A 22 425 425 HOH HOH . C 3 HOH A 23 426 426 HOH HOH . C 3 HOH A 24 427 427 HOH HOH . C 3 HOH A 25 428 428 HOH HOH . C 3 HOH A 26 429 429 HOH HOH . C 3 HOH A 27 430 430 HOH HOH . C 3 HOH A 28 431 431 HOH HOH . C 3 HOH A 29 432 432 HOH HOH . C 3 HOH A 30 433 433 HOH HOH . C 3 HOH A 31 434 434 HOH HOH . C 3 HOH A 32 435 435 HOH HOH . C 3 HOH A 33 436 436 HOH HOH . C 3 HOH A 34 437 437 HOH HOH . C 3 HOH A 35 438 438 HOH HOH . C 3 HOH A 36 439 439 HOH HOH . C 3 HOH A 37 440 440 HOH HOH . C 3 HOH A 38 441 441 HOH HOH . C 3 HOH A 39 442 442 HOH HOH . C 3 HOH A 40 443 443 HOH HOH . C 3 HOH A 41 444 444 HOH HOH . C 3 HOH A 42 445 445 HOH HOH . C 3 HOH A 43 446 446 HOH HOH . C 3 HOH A 44 447 447 HOH HOH . C 3 HOH A 45 448 448 HOH HOH . C 3 HOH A 46 449 449 HOH HOH . C 3 HOH A 47 450 450 HOH HOH . C 3 HOH A 48 451 451 HOH HOH . C 3 HOH A 49 452 452 HOH HOH . C 3 HOH A 50 453 453 HOH HOH . C 3 HOH A 51 454 454 HOH HOH . C 3 HOH A 52 455 455 HOH HOH . C 3 HOH A 53 456 456 HOH HOH . C 3 HOH A 54 457 457 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . B 2 22.355 11.828 70.4 1 19.88 ? PA FAD 403 A 1 HETATM 2 O O1A FAD . . . B 2 21.664 11.213 69.233 1 20.81 ? O1A FAD 403 A 1 HETATM 3 O O2A FAD . . . B 2 23.847 11.889 70.216 1 20.76 ? O2A FAD 403 A 1 HETATM 4 O O5B FAD . . . B 2 22.088 11.021 71.755 1 24.6 ? O5B FAD 403 A 1 HETATM 5 C C5B FAD . . . B 2 20.857 10.425 72.073 1 25.82 ? C5B FAD 403 A 1 HETATM 6 C C4B FAD . . . B 2 21.214 9.237 72.963 1 25.5 ? C4B FAD 403 A 1 HETATM 7 O O4B FAD . . . B 2 20.11 8.807 73.741 1 26.96 ? O4B FAD 403 A 1 HETATM 8 C C3B FAD . . . B 2 21.623 8.057 72.1 1 25.67 ? C3B FAD 403 A 1 HETATM 9 O O3B FAD . . . B 2 22.778 7.466 72.669 1 23.35 ? O3B FAD 403 A 1 HETATM 10 C C2B FAD . . . B 2 20.418 7.136 72.127 1 24.46 ? C2B FAD 403 A 1 HETATM 11 O O2B FAD . . . B 2 20.847 5.811 72 1 26.55 ? O2B FAD 403 A 1 HETATM 12 C C1B FAD . . . B 2 19.872 7.426 73.512 1 23.72 ? C1B FAD 403 A 1 HETATM 13 N N9A FAD . . . B 2 18.443 7.147 73.687 1 22.84 ? N9A FAD 403 A 1 HETATM 14 C C8A FAD . . . B 2 17.45 7.218 72.741 1 23.15 ? C8A FAD 403 A 1 HETATM 15 N N7A FAD . . . B 2 16.274 6.917 73.33 1 21.8 ? N7A FAD 403 A 1 HETATM 16 C C5A FAD . . . B 2 16.51 6.625 74.637 1 21.16 ? C5A FAD 403 A 1 HETATM 17 C C6A FAD . . . B 2 15.68 6.234 75.699 1 22.49 ? C6A FAD 403 A 1 HETATM 18 N N6A FAD . . . B 2 14.47 5.703 75.479 1 19.79 ? N6A FAD 403 A 1 HETATM 19 N N1A FAD . . . B 2 16.247 6.044 76.943 1 22.1 ? N1A FAD 403 A 1 HETATM 20 C C2A FAD . . . B 2 17.597 6.206 77.168 1 21.78 ? C2A FAD 403 A 1 HETATM 21 N N3A FAD . . . B 2 18.388 6.579 76.108 1 24.54 ? N3A FAD 403 A 1 HETATM 22 C C4A FAD . . . B 2 17.863 6.789 74.868 1 21.65 ? C4A FAD 403 A 1 HETATM 23 N N1 FAD . . . B 2 25.233 13.614 64.094 1 22.39 ? N1 FAD 403 A 1 HETATM 24 C C2 FAD . . . B 2 25.909 14.145 63.046 1 21.94 ? C2 FAD 403 A 1 HETATM 25 O O2 FAD . . . B 2 25.771 15.34 62.835 1 21.96 ? O2 FAD 403 A 1 HETATM 26 N N3 FAD . . . B 2 26.671 13.314 62.257 1 21.36 ? N3 FAD 403 A 1 HETATM 27 C C4 FAD . . . B 2 26.769 11.99 62.556 1 21.31 ? C4 FAD 403 A 1 HETATM 28 O O4 FAD . . . B 2 27.463 11.271 61.868 1 22.48 ? O4 FAD 403 A 1 HETATM 29 C C4X FAD . . . B 2 26.072 11.449 63.624 1 22.73 ? C4X FAD 403 A 1 HETATM 30 N N5 FAD . . . B 2 26.126 10.086 63.933 1 23.01 ? N5 FAD 403 A 1 HETATM 31 C C5X FAD . . . B 2 25.422 9.605 65.027 1 21.89 ? C5X FAD 403 A 1 HETATM 32 C C6 FAD . . . B 2 25.491 8.243 65.337 1 22.05 ? C6 FAD 403 A 1 HETATM 33 C C7 FAD . . . B 2 24.749 7.774 66.441 1 22.39 ? C7 FAD 403 A 1 HETATM 34 C C7M FAD . . . B 2 24.804 6.328 66.804 1 21.9 ? C7M FAD 403 A 1 HETATM 35 C C8 FAD . . . B 2 23.977 8.656 67.229 1 21.9 ? C8 FAD 403 A 1 HETATM 36 C C8M FAD . . . B 2 23.169 8.17 68.395 1 21.97 ? C8M FAD 403 A 1 HETATM 37 C C9 FAD . . . B 2 23.928 10.008 66.899 1 22.13 ? C9 FAD 403 A 1 HETATM 38 C C9A FAD . . . B 2 24.643 10.494 65.794 1 22.02 ? C9A FAD 403 A 1 HETATM 39 N N10 FAD . . . B 2 24.579 11.854 65.453 1 21.59 ? N10 FAD 403 A 1 HETATM 40 C C10 FAD . . . B 2 25.3 12.295 64.394 1 21.27 ? C10 FAD 403 A 1 HETATM 41 C C1' FAD . . . B 2 23.674 12.864 66.113 1 18.97 ? C1' FAD 403 A 1 HETATM 42 C C2' FAD . . . B 2 24.463 13.802 67.039 1 20.07 ? C2' FAD 403 A 1 HETATM 43 O O2' FAD . . . B 2 25.113 13.078 68.074 1 20.66 ? O2' FAD 403 A 1 HETATM 44 C C3' FAD . . . B 2 23.535 14.806 67.69 1 21.29 ? C3' FAD 403 A 1 HETATM 45 O O3' FAD . . . B 2 22.714 15.359 66.717 1 21.82 ? O3' FAD 403 A 1 HETATM 46 C C4' FAD . . . B 2 24.19 15.982 68.423 1 22.57 ? C4' FAD 403 A 1 HETATM 47 O O4' FAD . . . B 2 25.591 15.823 68.623 1 22.46 ? O4' FAD 403 A 1 HETATM 48 C C5' FAD . . . B 2 23.462 16.194 69.764 1 21.04 ? C5' FAD 403 A 1 HETATM 49 O O5' FAD . . . B 2 23.39 14.949 70.42 1 20.82 ? O5' FAD 403 A 1 HETATM 50 P P FAD . . . B 2 22.264 14.496 71.467 1 19.2 ? P FAD 403 A 1 HETATM 51 O O1P FAD . . . B 2 22.931 13.997 72.692 1 17.52 ? O1P FAD 403 A 1 HETATM 52 O O2P FAD . . . B 2 21.164 15.501 71.677 1 18.8 ? O2P FAD 403 A 1 HETATM 53 O O3P FAD . . . B 2 21.616 13.219 70.735 1 21.55 ? O3P FAD 403 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 208 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #