data_2RH1 # _model_server_result.job_id j6IZf2i6lEJW8rQPDXZytw _model_server_result.datetime_utc '2024-11-22 11:44:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2rh1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":413}' # _entry.id 2RH1 # _exptl.entry_id 2RH1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.62 _cell.angle_gamma 90 _cell.entry_id 2RH1 _cell.length_a 106.318 _cell.length_b 169.24 _cell.length_c 40.154 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RH1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 M N N ? 7 N N N ? 7 O N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B GLC 1 B 1 GLC A 401 MAL 2 n B GLC 2 B 2 GLC A 401 MAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 113 A CYS 106 1_555 A SG CYS 198 A CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf2 A SG CYS 191 A CYS 184 1_555 A SG CYS 197 A CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? covale ? covale1 A SG CYS 400 A CYS 265 1_555 L C2 ACM . A ACM 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.611 ? covale ? covale2 A SG CYS 476 A CYS 341 1_555 P C1 PLM . A PLM 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.616 ? covale ? covale3 B O4 GLC . B GLC 1 1_555 B C1 GLC . B GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.468 sing # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 225 n n C1 C10 CLR sing 226 n n C1 H11 CLR sing 227 n n C1 H12 CLR sing 228 n n C2 C3 CLR sing 229 n n C2 H21 CLR sing 230 n n C2 H22 CLR sing 231 n n C3 C4 CLR sing 232 n n C3 O1 CLR sing 233 n n C3 H3 CLR sing 234 n n C4 C5 CLR sing 235 n n C4 H41 CLR sing 236 n n C4 H42 CLR sing 237 n n C5 C6 CLR doub 238 n n C5 C10 CLR sing 239 n n C6 C7 CLR sing 240 n n C6 H6 CLR sing 241 n n C7 C8 CLR sing 242 n n C7 H71 CLR sing 243 n n C7 H72 CLR sing 244 n n C8 C9 CLR sing 245 n n C8 C14 CLR sing 246 n n C8 H8 CLR sing 247 n n C9 C10 CLR sing 248 n n C9 C11 CLR sing 249 n n C9 H9 CLR sing 250 n n C10 C19 CLR sing 251 n n C11 C12 CLR sing 252 n n C11 H111 CLR sing 253 n n C11 H112 CLR sing 254 n n C12 C13 CLR sing 255 n n C12 H121 CLR sing 256 n n C12 H122 CLR sing 257 n n C13 C14 CLR sing 258 n n C13 C17 CLR sing 259 n n C13 C18 CLR sing 260 n n C14 C15 CLR sing 261 n n C14 H14 CLR sing 262 n n C15 C16 CLR sing 263 n n C15 H151 CLR sing 264 n n C15 H152 CLR sing 265 n n C16 C17 CLR sing 266 n n C16 H161 CLR sing 267 n n C16 H162 CLR sing 268 n n C17 C20 CLR sing 269 n n C17 H17 CLR sing 270 n n C18 H181 CLR sing 271 n n C18 H182 CLR sing 272 n n C18 H183 CLR sing 273 n n C19 H191 CLR sing 274 n n C19 H192 CLR sing 275 n n C19 H193 CLR sing 276 n n C20 C21 CLR sing 277 n n C20 C22 CLR sing 278 n n C20 H20 CLR sing 279 n n C21 H211 CLR sing 280 n n C21 H212 CLR sing 281 n n C21 H213 CLR sing 282 n n C22 C23 CLR sing 283 n n C22 H221 CLR sing 284 n n C22 H222 CLR sing 285 n n C23 C24 CLR sing 286 n n C23 H231 CLR sing 287 n n C23 H232 CLR sing 288 n n C24 C25 CLR sing 289 n n C24 H241 CLR sing 290 n n C24 H242 CLR sing 291 n n C25 C26 CLR sing 292 n n C25 C27 CLR sing 293 n n C25 H25 CLR sing 294 n n C26 H261 CLR sing 295 n n C26 H262 CLR sing 296 n n C26 H263 CLR sing 297 n n C27 H271 CLR sing 298 n n C27 H272 CLR sing 299 n n C27 H273 CLR sing 300 n n O1 H1 CLR sing 301 n n # _atom_sites.entry_id 2RH1 _atom_sites.fract_transf_matrix[1][1] 0.009406 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00263 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005909 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025859 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 402 402 SO4 SO4 . D 3 SO4 A 1 403 403 SO4 SO4 . E 3 SO4 A 1 404 404 SO4 SO4 . F 3 SO4 A 1 405 405 SO4 SO4 . G 3 SO4 A 1 406 406 SO4 SO4 . H 3 SO4 A 1 407 407 SO4 SO4 . I 4 CAU A 1 408 408 CAU CAU . J 5 BU1 A 1 409 409 BU1 BU1 . K 5 BU1 A 1 410 410 BU1 BU1 . L 6 ACM A 1 411 411 ACM ACM . M 7 CLR A 1 412 412 CLR CLR . N 7 CLR A 1 413 413 CLR CLR . O 7 CLR A 1 414 414 CLR CLR . P 8 PLM A 1 415 415 PLM PLM . Q 9 12P A 1 416 416 12P 12P . R 10 HOH A 1 501 501 HOH HOH . R 10 HOH A 2 502 502 HOH HOH . R 10 HOH A 3 503 503 HOH HOH . R 10 HOH A 4 504 504 HOH HOH . R 10 HOH A 5 505 505 HOH HOH . R 10 HOH A 6 506 506 HOH HOH . R 10 HOH A 7 507 507 HOH HOH . R 10 HOH A 8 508 508 HOH HOH . R 10 HOH A 9 509 509 HOH HOH . R 10 HOH A 10 510 510 HOH HOH . R 10 HOH A 11 511 511 HOH HOH . R 10 HOH A 12 512 512 HOH HOH . R 10 HOH A 13 513 513 HOH HOH . R 10 HOH A 14 514 514 HOH HOH . R 10 HOH A 15 515 515 HOH HOH . R 10 HOH A 16 516 516 HOH HOH . R 10 HOH A 17 517 517 HOH HOH . R 10 HOH A 18 518 518 HOH HOH . R 10 HOH A 19 519 519 HOH HOH . R 10 HOH A 20 520 520 HOH HOH . R 10 HOH A 21 521 521 HOH HOH . R 10 HOH A 22 522 522 HOH HOH . R 10 HOH A 23 523 523 HOH HOH . R 10 HOH A 24 524 524 HOH HOH . R 10 HOH A 25 525 525 HOH HOH . R 10 HOH A 26 526 526 HOH HOH . R 10 HOH A 27 527 527 HOH HOH . R 10 HOH A 28 528 528 HOH HOH . R 10 HOH A 29 529 529 HOH HOH . R 10 HOH A 30 530 530 HOH HOH . R 10 HOH A 31 531 531 HOH HOH . R 10 HOH A 32 532 532 HOH HOH . R 10 HOH A 33 533 533 HOH HOH . R 10 HOH A 34 534 534 HOH HOH . R 10 HOH A 35 535 535 HOH HOH . R 10 HOH A 36 536 536 HOH HOH . R 10 HOH A 37 537 537 HOH HOH . R 10 HOH A 38 538 538 HOH HOH . R 10 HOH A 39 539 539 HOH HOH . R 10 HOH A 40 540 540 HOH HOH . R 10 HOH A 41 541 541 HOH HOH . R 10 HOH A 42 542 542 HOH HOH . R 10 HOH A 43 543 543 HOH HOH . R 10 HOH A 44 544 544 HOH HOH . R 10 HOH A 45 545 545 HOH HOH . R 10 HOH A 46 546 546 HOH HOH . R 10 HOH A 47 547 547 HOH HOH . R 10 HOH A 48 548 548 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . N 7 -52.083 29.442 3.198 1 84.76 ? C1 CLR 413 A 1 HETATM 2 C C2 CLR . . . N 7 -52.244 30.951 3.1 1 85.75 ? C2 CLR 413 A 1 HETATM 3 C C3 CLR . . . N 7 -53.214 31.296 1.956 1 84.48 ? C3 CLR 413 A 1 HETATM 4 C C4 CLR . . . N 7 -54.606 30.718 2.233 1 82.59 ? C4 CLR 413 A 1 HETATM 5 C C5 CLR . . . N 7 -54.424 29.218 2.245 1 86.97 ? C5 CLR 413 A 1 HETATM 6 C C6 CLR . . . N 7 -55.171 28.468 1.4 1 86.01 ? C6 CLR 413 A 1 HETATM 7 C C7 CLR . . . N 7 -55.077 26.968 1.309 1 88 ? C7 CLR 413 A 1 HETATM 8 C C8 CLR . . . N 7 -54.34 26.362 2.487 1 89.33 ? C8 CLR 413 A 1 HETATM 9 C C9 CLR . . . N 7 -53.087 27.161 2.862 1 88.72 ? C9 CLR 413 A 1 HETATM 10 C C10 CLR . . . N 7 -53.399 28.636 3.214 1 85.54 ? C10 CLR 413 A 1 HETATM 11 C C11 CLR . . . N 7 -52.265 26.44 3.959 1 87.79 ? C11 CLR 413 A 1 HETATM 12 C C12 CLR . . . N 7 -51.961 24.981 3.616 1 90.38 ? C12 CLR 413 A 1 HETATM 13 C C13 CLR . . . N 7 -53.219 24.202 3.283 1 90.23 ? C13 CLR 413 A 1 HETATM 14 C C14 CLR . . . N 7 -53.904 24.933 2.142 1 92.32 ? C14 CLR 413 A 1 HETATM 15 C C15 CLR . . . N 7 -54.976 23.971 1.668 1 92.65 ? C15 CLR 413 A 1 HETATM 16 C C16 CLR . . . N 7 -54.282 22.616 1.827 1 93.79 ? C16 CLR 413 A 1 HETATM 17 C C17 CLR . . . N 7 -53.018 22.82 2.693 1 91.53 ? C17 CLR 413 A 1 HETATM 18 C C18 CLR . . . N 7 -54.156 24.093 4.499 1 87.86 ? C18 CLR 413 A 1 HETATM 19 C C19 CLR . . . N 7 -54.039 28.774 4.595 1 82.64 ? C19 CLR 413 A 1 HETATM 20 C C20 CLR . . . N 7 -52.772 21.624 3.653 1 91.51 ? C20 CLR 413 A 1 HETATM 21 C C21 CLR . . . N 7 -51.815 21.878 4.816 1 89.13 ? C21 CLR 413 A 1 HETATM 22 C C22 CLR . . . N 7 -52.233 20.43 2.857 1 91.91 ? C22 CLR 413 A 1 HETATM 23 C C23 CLR . . . N 7 -52.841 19.099 3.296 1 93.3 ? C23 CLR 413 A 1 HETATM 24 C C24 CLR . . . N 7 -52.459 17.993 2.311 1 92.99 ? C24 CLR 413 A 1 HETATM 25 C C25 CLR . . . N 7 -51.938 16.746 3.002 1 92.39 ? C25 CLR 413 A 1 HETATM 26 C C26 CLR . . . N 7 -52.059 15.541 2.076 1 94.36 ? C26 CLR 413 A 1 HETATM 27 C C27 CLR . . . N 7 -50.499 16.952 3.46 1 89.59 ? C27 CLR 413 A 1 HETATM 28 O O1 CLR . . . N 7 -53.334 32.684 1.607 1 81.53 ? O1 CLR 413 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 41 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #