data_2RHA # _model_server_result.job_id BJA1xxeFPySCa9nn97hYuA _model_server_result.datetime_utc '2024-10-19 00:47:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2rha # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":222}' # _entry.id 2RHA # _exptl.entry_id 2RHA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2RHA _cell.length_a 102.837 _cell.length_b 102.837 _cell.length_c 111.276 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RHA _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 111.276 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ILE 28 A ILE 27 1_555 A N MSE 29 A MSE 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale2 A C MSE 29 A MSE 28 1_555 A N ARG 30 A ARG 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C ASP 71 A ASP 70 1_555 A N MSE 72 A MSE 71 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C ASP 71 A ASP 70 1_555 A N MSE 72 A MSE 71 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.331 ? covale ? covale5 A C MSE 72 A MSE 71 1_555 A N GLU 73 A GLU 72 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale6 A C MSE 72 A MSE 71 1_555 A N GLU 73 A GLU 72 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale7 A C ASP 87 A ASP 86 1_555 A N MSE 88 A MSE 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale8 A C MSE 88 A MSE 87 1_555 A N SER 89 A SER 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale9 A C LEU 115 A LEU 114 1_555 A N MSE 116 A MSE 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale10 A C MSE 116 A MSE 115 1_555 A N ARG 117 A ARG 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale11 A C ILE 206 A ILE 205 1_555 A N MSE 207 A MSE 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale12 A C MSE 207 A MSE 206 1_555 A N ALA 208 A ALA 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2RHA _atom_sites.fract_transf_matrix[1][1] 0.009724 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009724 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008987 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 213 1 CL CL . C 2 CL A 1 214 2 CL CL . D 3 SO4 A 1 215 3 SO4 SO4 . E 3 SO4 A 1 216 4 SO4 SO4 . F 3 SO4 A 1 217 5 SO4 SO4 . G 3 SO4 A 1 218 6 SO4 SO4 . H 4 GOL A 1 219 7 GOL GOL . I 4 GOL A 1 220 8 GOL GOL . J 4 GOL A 1 221 9 GOL GOL . K 4 GOL A 1 222 10 GOL GOL . L 4 GOL A 1 223 11 GOL GOL . M 4 GOL A 1 224 12 GOL GOL . N 4 GOL A 1 225 13 GOL GOL . O 4 GOL A 1 226 14 GOL GOL . P 4 GOL A 1 227 15 GOL GOL . Q 4 GOL A 1 228 16 GOL GOL . R 4 GOL A 1 229 17 GOL GOL . S 5 HOH A 1 230 18 HOH HOH . S 5 HOH A 2 231 19 HOH HOH . S 5 HOH A 3 232 20 HOH HOH . S 5 HOH A 4 233 21 HOH HOH . S 5 HOH A 5 234 22 HOH HOH . S 5 HOH A 6 235 23 HOH HOH . S 5 HOH A 7 236 24 HOH HOH . S 5 HOH A 8 237 25 HOH HOH . S 5 HOH A 9 238 26 HOH HOH . S 5 HOH A 10 239 27 HOH HOH . S 5 HOH A 11 240 28 HOH HOH . S 5 HOH A 12 241 29 HOH HOH . S 5 HOH A 13 242 30 HOH HOH . S 5 HOH A 14 243 31 HOH HOH . S 5 HOH A 15 244 32 HOH HOH . S 5 HOH A 16 245 33 HOH HOH . S 5 HOH A 17 246 34 HOH HOH . S 5 HOH A 18 247 35 HOH HOH . S 5 HOH A 19 248 36 HOH HOH . S 5 HOH A 20 249 37 HOH HOH . S 5 HOH A 21 250 38 HOH HOH . S 5 HOH A 22 251 39 HOH HOH . S 5 HOH A 23 252 40 HOH HOH . S 5 HOH A 24 253 41 HOH HOH . S 5 HOH A 25 254 42 HOH HOH . S 5 HOH A 26 255 43 HOH HOH . S 5 HOH A 27 256 44 HOH HOH . S 5 HOH A 28 257 45 HOH HOH . S 5 HOH A 29 258 46 HOH HOH . S 5 HOH A 30 259 47 HOH HOH . S 5 HOH A 31 260 48 HOH HOH . S 5 HOH A 32 261 49 HOH HOH . S 5 HOH A 33 262 50 HOH HOH . S 5 HOH A 34 263 51 HOH HOH . S 5 HOH A 35 264 52 HOH HOH . S 5 HOH A 36 265 53 HOH HOH . S 5 HOH A 37 266 54 HOH HOH . S 5 HOH A 38 267 55 HOH HOH . S 5 HOH A 39 268 56 HOH HOH . S 5 HOH A 40 269 57 HOH HOH . S 5 HOH A 41 270 58 HOH HOH . S 5 HOH A 42 271 59 HOH HOH . S 5 HOH A 43 272 60 HOH HOH . S 5 HOH A 44 273 61 HOH HOH . S 5 HOH A 45 274 62 HOH HOH . S 5 HOH A 46 275 63 HOH HOH . S 5 HOH A 47 276 64 HOH HOH . S 5 HOH A 48 277 65 HOH HOH . S 5 HOH A 49 278 66 HOH HOH . S 5 HOH A 50 279 67 HOH HOH . S 5 HOH A 51 280 68 HOH HOH . S 5 HOH A 52 281 69 HOH HOH . S 5 HOH A 53 282 70 HOH HOH . S 5 HOH A 54 283 71 HOH HOH . S 5 HOH A 55 284 72 HOH HOH . S 5 HOH A 56 285 73 HOH HOH . S 5 HOH A 57 286 74 HOH HOH . S 5 HOH A 58 287 75 HOH HOH . S 5 HOH A 59 288 76 HOH HOH . S 5 HOH A 60 289 77 HOH HOH . S 5 HOH A 61 290 78 HOH HOH . S 5 HOH A 62 291 79 HOH HOH . S 5 HOH A 63 292 80 HOH HOH . S 5 HOH A 64 293 81 HOH HOH . S 5 HOH A 65 294 82 HOH HOH . S 5 HOH A 66 295 83 HOH HOH . S 5 HOH A 67 296 84 HOH HOH . S 5 HOH A 68 297 85 HOH HOH . S 5 HOH A 69 298 86 HOH HOH . S 5 HOH A 70 299 87 HOH HOH . S 5 HOH A 71 300 88 HOH HOH . S 5 HOH A 72 301 89 HOH HOH . S 5 HOH A 73 302 90 HOH HOH . S 5 HOH A 74 303 91 HOH HOH . S 5 HOH A 75 304 92 HOH HOH . S 5 HOH A 76 305 93 HOH HOH . S 5 HOH A 77 306 94 HOH HOH . S 5 HOH A 78 307 95 HOH HOH . S 5 HOH A 79 308 96 HOH HOH . S 5 HOH A 80 309 97 HOH HOH . S 5 HOH A 81 310 98 HOH HOH . S 5 HOH A 82 311 99 HOH HOH . S 5 HOH A 83 312 100 HOH HOH . S 5 HOH A 84 313 101 HOH HOH . S 5 HOH A 85 314 102 HOH HOH . S 5 HOH A 86 315 103 HOH HOH . S 5 HOH A 87 316 104 HOH HOH . S 5 HOH A 88 317 105 HOH HOH . S 5 HOH A 89 318 106 HOH HOH . S 5 HOH A 90 319 107 HOH HOH . S 5 HOH A 91 320 108 HOH HOH . S 5 HOH A 92 321 109 HOH HOH . S 5 HOH A 93 322 110 HOH HOH . S 5 HOH A 94 323 111 HOH HOH . S 5 HOH A 95 324 112 HOH HOH . S 5 HOH A 96 325 113 HOH HOH . S 5 HOH A 97 326 114 HOH HOH . S 5 HOH A 98 327 115 HOH HOH . S 5 HOH A 99 328 116 HOH HOH . S 5 HOH A 100 329 117 HOH HOH . S 5 HOH A 101 330 118 HOH HOH . S 5 HOH A 102 331 119 HOH HOH . S 5 HOH A 103 332 120 HOH HOH . S 5 HOH A 104 333 121 HOH HOH . S 5 HOH A 105 334 122 HOH HOH . S 5 HOH A 106 335 123 HOH HOH . S 5 HOH A 107 336 124 HOH HOH . S 5 HOH A 108 337 125 HOH HOH . S 5 HOH A 109 338 126 HOH HOH . S 5 HOH A 110 339 127 HOH HOH . S 5 HOH A 111 340 128 HOH HOH . S 5 HOH A 112 341 129 HOH HOH . S 5 HOH A 113 342 130 HOH HOH . S 5 HOH A 114 343 131 HOH HOH . S 5 HOH A 115 344 132 HOH HOH . S 5 HOH A 116 345 133 HOH HOH . S 5 HOH A 117 346 134 HOH HOH . S 5 HOH A 118 347 135 HOH HOH . S 5 HOH A 119 348 136 HOH HOH . S 5 HOH A 120 349 137 HOH HOH . S 5 HOH A 121 350 138 HOH HOH . S 5 HOH A 122 351 139 HOH HOH . S 5 HOH A 123 352 140 HOH HOH . S 5 HOH A 124 353 141 HOH HOH . S 5 HOH A 125 354 142 HOH HOH . S 5 HOH A 126 355 143 HOH HOH . S 5 HOH A 127 356 144 HOH HOH . S 5 HOH A 128 357 145 HOH HOH . S 5 HOH A 129 358 146 HOH HOH . S 5 HOH A 130 359 147 HOH HOH . S 5 HOH A 131 360 148 HOH HOH . S 5 HOH A 132 361 149 HOH HOH . S 5 HOH A 133 362 150 HOH HOH . S 5 HOH A 134 363 151 HOH HOH . S 5 HOH A 135 364 152 HOH HOH . S 5 HOH A 136 365 153 HOH HOH . S 5 HOH A 137 366 154 HOH HOH . S 5 HOH A 138 367 155 HOH HOH . S 5 HOH A 139 368 156 HOH HOH . S 5 HOH A 140 369 157 HOH HOH . S 5 HOH A 141 370 158 HOH HOH . S 5 HOH A 142 371 159 HOH HOH . S 5 HOH A 143 372 160 HOH HOH . S 5 HOH A 144 373 161 HOH HOH . S 5 HOH A 145 374 162 HOH HOH . S 5 HOH A 146 375 163 HOH HOH . S 5 HOH A 147 376 164 HOH HOH . S 5 HOH A 148 377 165 HOH HOH . S 5 HOH A 149 378 166 HOH HOH . S 5 HOH A 150 379 167 HOH HOH . S 5 HOH A 151 380 168 HOH HOH . S 5 HOH A 152 381 169 HOH HOH . S 5 HOH A 153 382 170 HOH HOH . S 5 HOH A 154 383 171 HOH HOH . S 5 HOH A 155 384 172 HOH HOH . S 5 HOH A 156 385 173 HOH HOH . S 5 HOH A 157 386 174 HOH HOH . S 5 HOH A 158 387 175 HOH HOH . S 5 HOH A 159 388 176 HOH HOH . S 5 HOH A 160 389 177 HOH HOH . S 5 HOH A 161 390 178 HOH HOH . S 5 HOH A 162 391 179 HOH HOH . S 5 HOH A 163 392 180 HOH HOH . S 5 HOH A 164 393 181 HOH HOH . S 5 HOH A 165 394 182 HOH HOH . S 5 HOH A 166 395 183 HOH HOH . S 5 HOH A 167 396 184 HOH HOH . S 5 HOH A 168 397 185 HOH HOH . S 5 HOH A 169 398 186 HOH HOH . S 5 HOH A 170 399 187 HOH HOH . S 5 HOH A 171 400 188 HOH HOH . S 5 HOH A 172 401 189 HOH HOH . S 5 HOH A 173 402 190 HOH HOH . S 5 HOH A 174 403 191 HOH HOH . S 5 HOH A 175 404 192 HOH HOH . S 5 HOH A 176 405 193 HOH HOH . S 5 HOH A 177 406 194 HOH HOH . S 5 HOH A 178 407 195 HOH HOH . S 5 HOH A 179 408 196 HOH HOH . S 5 HOH A 180 409 197 HOH HOH . S 5 HOH A 181 410 198 HOH HOH . S 5 HOH A 182 411 199 HOH HOH . S 5 HOH A 183 412 200 HOH HOH . S 5 HOH A 184 413 201 HOH HOH . S 5 HOH A 185 414 202 HOH HOH . S 5 HOH A 186 415 203 HOH HOH . S 5 HOH A 187 416 204 HOH HOH . S 5 HOH A 188 417 205 HOH HOH . S 5 HOH A 189 418 206 HOH HOH . S 5 HOH A 190 419 207 HOH HOH . S 5 HOH A 191 420 208 HOH HOH . S 5 HOH A 192 421 209 HOH HOH . S 5 HOH A 193 422 210 HOH HOH . S 5 HOH A 194 423 211 HOH HOH . S 5 HOH A 195 424 212 HOH HOH . S 5 HOH A 196 425 213 HOH HOH . S 5 HOH A 197 426 214 HOH HOH . S 5 HOH A 198 427 215 HOH HOH . S 5 HOH A 199 428 216 HOH HOH . S 5 HOH A 200 429 217 HOH HOH . S 5 HOH A 201 430 218 HOH HOH . S 5 HOH A 202 431 219 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . K 4 22.569 10.93 37.191 1 78.11 ? C1 GOL 222 A 1 HETATM 2 O O1 GOL . . . K 4 21.497 11.836 37.301 1 76.08 ? O1 GOL 222 A 1 HETATM 3 C C2 GOL . . . K 4 23.679 11.303 38.165 1 77.78 ? C2 GOL 222 A 1 HETATM 4 O O2 GOL . . . K 4 24.795 10.462 37.96 1 84.41 ? O2 GOL 222 A 1 HETATM 5 C C3 GOL . . . K 4 23.226 11.253 39.624 1 68.18 ? C3 GOL 222 A 1 HETATM 6 O O3 GOL . . . K 4 22.56 10.05 39.949 1 68.89 ? O3 GOL 222 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #