data_2RHR # _model_server_result.job_id BnpLTdYfVIKjJHLli5HIeQ _model_server_result.datetime_utc '2024-11-24 23:17:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2rhr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":303}' # _entry.id 2RHR # _exptl.entry_id 2RHR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 270.237 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-METHYL-1,6,8-TRIHYDROXYANTHRAQUINONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2RHR _cell.length_a 104.778 _cell.length_b 104.778 _cell.length_c 123.364 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RHR _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -41.121333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C15 H10 O5' _chem_comp.formula_weight 270.237 _chem_comp.id EMO _chem_comp.mon_nstd_flag . _chem_comp.name 3-METHYL-1,6,8-TRIHYDROXYANTHRAQUINONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms EMODIN # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EMO sing 83 n n C1 C2 EMO doub 84 n y C1 C20 EMO sing 85 n y O1 HO1 EMO sing 86 n n C2 C3 EMO sing 87 n y C2 H2 EMO sing 88 n n C3 O3 EMO sing 89 n n C3 C4 EMO doub 90 n y O3 HO3 EMO sing 91 n n C4 C5 EMO sing 92 n y C4 H4 EMO sing 93 n n C5 C6 EMO sing 94 n n C5 C20 EMO doub 95 n y C6 O6 EMO doub 96 n n C6 C7 EMO sing 97 n n C7 C8 EMO doub 98 n y C7 C18 EMO sing 99 n y C8 C9 EMO sing 100 n y C8 H8 EMO sing 101 n n C9 C10 EMO sing 102 n n C9 C16 EMO doub 103 n y C10 H101 EMO sing 104 n n C10 H102 EMO sing 105 n n C10 H103 EMO sing 106 n n C16 C17 EMO sing 107 n y C16 H16 EMO sing 108 n n C17 O17 EMO sing 109 n n C17 C18 EMO doub 110 n y O17 H17 EMO sing 111 n n C18 C19 EMO sing 112 n n C19 O19 EMO doub 113 n n C19 C20 EMO sing 114 n n # _atom_sites.entry_id 2RHR _atom_sites.fract_transf_matrix[1][1] 0.009544 _atom_sites.fract_transf_matrix[1][2] 0.00551 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01102 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008106 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP B 1 301 301 NDP NAP . D 2 NDP A 1 301 301 NDP NAP . E 3 EMO A 1 302 302 EMO EMO . F 3 EMO A 1 303 303 EMO EMO . G 4 HOH B 1 302 246 HOH HOH . G 4 HOH B 2 303 1 HOH HOH . G 4 HOH B 3 304 3 HOH HOH . G 4 HOH B 4 305 6 HOH HOH . G 4 HOH B 5 306 12 HOH HOH . G 4 HOH B 6 307 19 HOH HOH . G 4 HOH B 7 308 23 HOH HOH . G 4 HOH B 8 309 27 HOH HOH . G 4 HOH B 9 310 34 HOH HOH . G 4 HOH B 10 311 36 HOH HOH . G 4 HOH B 11 312 37 HOH HOH . G 4 HOH B 12 313 47 HOH HOH . G 4 HOH B 13 314 51 HOH HOH . G 4 HOH B 14 315 57 HOH HOH . G 4 HOH B 15 316 58 HOH HOH . G 4 HOH B 16 317 60 HOH HOH . G 4 HOH B 17 318 65 HOH HOH . G 4 HOH B 18 319 68 HOH HOH . G 4 HOH B 19 320 81 HOH HOH . G 4 HOH B 20 321 85 HOH HOH . G 4 HOH B 21 322 92 HOH HOH . G 4 HOH B 22 323 94 HOH HOH . G 4 HOH B 23 324 95 HOH HOH . G 4 HOH B 24 325 97 HOH HOH . G 4 HOH B 25 326 101 HOH HOH . G 4 HOH B 26 327 107 HOH HOH . G 4 HOH B 27 328 113 HOH HOH . G 4 HOH B 28 329 114 HOH HOH . G 4 HOH B 29 330 115 HOH HOH . G 4 HOH B 30 331 117 HOH HOH . G 4 HOH B 31 332 119 HOH HOH . G 4 HOH B 32 333 122 HOH HOH . G 4 HOH B 33 334 123 HOH HOH . G 4 HOH B 34 335 139 HOH HOH . G 4 HOH B 35 336 147 HOH HOH . G 4 HOH B 36 337 150 HOH HOH . G 4 HOH B 37 338 151 HOH HOH . G 4 HOH B 38 339 154 HOH HOH . G 4 HOH B 39 340 163 HOH HOH . G 4 HOH B 40 341 166 HOH HOH . G 4 HOH B 41 342 168 HOH HOH . G 4 HOH B 42 343 169 HOH HOH . G 4 HOH B 43 344 172 HOH HOH . G 4 HOH B 44 345 173 HOH HOH . G 4 HOH B 45 346 174 HOH HOH . G 4 HOH B 46 347 176 HOH HOH . G 4 HOH B 47 348 177 HOH HOH . G 4 HOH B 48 349 178 HOH HOH . G 4 HOH B 49 350 179 HOH HOH . G 4 HOH B 50 351 180 HOH HOH . G 4 HOH B 51 352 181 HOH HOH . G 4 HOH B 52 353 182 HOH HOH . G 4 HOH B 53 354 183 HOH HOH . G 4 HOH B 54 355 185 HOH HOH . G 4 HOH B 55 356 188 HOH HOH . G 4 HOH B 56 357 192 HOH HOH . G 4 HOH B 57 358 193 HOH HOH . G 4 HOH B 58 359 194 HOH HOH . G 4 HOH B 59 360 195 HOH HOH . G 4 HOH B 60 361 196 HOH HOH . G 4 HOH B 61 362 198 HOH HOH . G 4 HOH B 62 363 207 HOH HOH . G 4 HOH B 63 364 227 HOH HOH . G 4 HOH B 64 365 228 HOH HOH . G 4 HOH B 65 366 231 HOH HOH . G 4 HOH B 66 367 232 HOH HOH . G 4 HOH B 67 368 233 HOH HOH . G 4 HOH B 68 369 247 HOH HOH . G 4 HOH B 69 370 249 HOH HOH . G 4 HOH B 70 371 250 HOH HOH . G 4 HOH B 71 372 251 HOH HOH . G 4 HOH B 72 373 253 HOH HOH . G 4 HOH B 73 374 254 HOH HOH . G 4 HOH B 74 375 255 HOH HOH . G 4 HOH B 75 376 257 HOH HOH . G 4 HOH B 76 377 258 HOH HOH . G 4 HOH B 77 378 261 HOH HOH . G 4 HOH B 78 379 263 HOH HOH . G 4 HOH B 79 380 264 HOH HOH . G 4 HOH B 80 381 265 HOH HOH . G 4 HOH B 81 382 269 HOH HOH . G 4 HOH B 82 383 270 HOH HOH . G 4 HOH B 83 384 272 HOH HOH . G 4 HOH B 84 385 273 HOH HOH . G 4 HOH B 85 386 274 HOH HOH . G 4 HOH B 86 387 277 HOH HOH . H 4 HOH A 1 304 2 HOH HOH . H 4 HOH A 2 305 5 HOH HOH . H 4 HOH A 3 306 9 HOH HOH . H 4 HOH A 4 307 11 HOH HOH . H 4 HOH A 5 308 13 HOH HOH . H 4 HOH A 6 309 14 HOH HOH . H 4 HOH A 7 310 15 HOH HOH . H 4 HOH A 8 311 18 HOH HOH . H 4 HOH A 9 312 22 HOH HOH . H 4 HOH A 10 313 33 HOH HOH . H 4 HOH A 11 314 35 HOH HOH . H 4 HOH A 12 315 38 HOH HOH . H 4 HOH A 13 316 50 HOH HOH . H 4 HOH A 14 317 56 HOH HOH . H 4 HOH A 15 318 59 HOH HOH . H 4 HOH A 16 319 61 HOH HOH . H 4 HOH A 17 320 67 HOH HOH . H 4 HOH A 18 321 69 HOH HOH . H 4 HOH A 19 322 76 HOH HOH . H 4 HOH A 20 323 87 HOH HOH . H 4 HOH A 21 324 98 HOH HOH . H 4 HOH A 22 325 99 HOH HOH . H 4 HOH A 23 326 105 HOH HOH . H 4 HOH A 24 327 111 HOH HOH . H 4 HOH A 25 328 125 HOH HOH . H 4 HOH A 26 329 131 HOH HOH . H 4 HOH A 27 330 134 HOH HOH . H 4 HOH A 28 331 135 HOH HOH . H 4 HOH A 29 332 140 HOH HOH . H 4 HOH A 30 333 141 HOH HOH . H 4 HOH A 31 334 155 HOH HOH . H 4 HOH A 32 335 171 HOH HOH . H 4 HOH A 33 336 186 HOH HOH . H 4 HOH A 34 337 189 HOH HOH . H 4 HOH A 35 338 190 HOH HOH . H 4 HOH A 36 339 191 HOH HOH . H 4 HOH A 37 340 197 HOH HOH . H 4 HOH A 38 341 200 HOH HOH . H 4 HOH A 39 342 201 HOH HOH . H 4 HOH A 40 343 203 HOH HOH . H 4 HOH A 41 344 204 HOH HOH . H 4 HOH A 42 345 206 HOH HOH . H 4 HOH A 43 346 209 HOH HOH . H 4 HOH A 44 347 210 HOH HOH . H 4 HOH A 45 348 211 HOH HOH . H 4 HOH A 46 349 212 HOH HOH . H 4 HOH A 47 350 213 HOH HOH . H 4 HOH A 48 351 214 HOH HOH . H 4 HOH A 49 352 215 HOH HOH . H 4 HOH A 50 353 216 HOH HOH . H 4 HOH A 51 354 217 HOH HOH . H 4 HOH A 52 355 218 HOH HOH . H 4 HOH A 53 356 219 HOH HOH . H 4 HOH A 54 357 221 HOH HOH . H 4 HOH A 55 358 222 HOH HOH . H 4 HOH A 56 359 223 HOH HOH . H 4 HOH A 57 360 224 HOH HOH . H 4 HOH A 58 361 225 HOH HOH . H 4 HOH A 59 362 226 HOH HOH . H 4 HOH A 60 363 230 HOH HOH . H 4 HOH A 61 364 234 HOH HOH . H 4 HOH A 62 365 235 HOH HOH . H 4 HOH A 63 366 236 HOH HOH . H 4 HOH A 64 367 237 HOH HOH . H 4 HOH A 65 368 238 HOH HOH . H 4 HOH A 66 369 239 HOH HOH . H 4 HOH A 67 370 240 HOH HOH . H 4 HOH A 68 371 241 HOH HOH . H 4 HOH A 69 372 244 HOH HOH . H 4 HOH A 70 373 266 HOH HOH . H 4 HOH A 71 374 267 HOH HOH . H 4 HOH A 72 375 275 HOH HOH . H 4 HOH A 73 376 276 HOH HOH . H 4 HOH A 74 377 279 HOH HOH . H 4 HOH A 75 378 280 HOH HOH . H 4 HOH A 76 379 281 HOH HOH . H 4 HOH A 77 380 282 HOH HOH . H 4 HOH A 78 381 283 HOH HOH . H 4 HOH A 79 382 284 HOH HOH . H 4 HOH A 80 383 285 HOH HOH . H 4 HOH A 81 384 287 HOH HOH . H 4 HOH A 82 385 288 HOH HOH . H 4 HOH A 83 386 289 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EMO . . . F 3 -28.842 45.747 -13.669 1 70.41 ? C1 EMO 303 A 1 HETATM 2 O O1 EMO . . . F 3 -29.182 47.07 -13.67 1 70.37 ? O1 EMO 303 A 1 HETATM 3 C C2 EMO . . . F 3 -27.922 45.369 -14.719 1 72.39 ? C2 EMO 303 A 1 HETATM 4 C C3 EMO . . . F 3 -27.491 43.995 -14.82 1 73.46 ? C3 EMO 303 A 1 HETATM 5 O O3 EMO . . . F 3 -26.617 43.629 -15.812 1 75.12 ? O3 EMO 303 A 1 HETATM 6 C C4 EMO . . . F 3 -27.954 42.979 -13.899 1 71.68 ? C4 EMO 303 A 1 HETATM 7 C C5 EMO . . . F 3 -28.881 43.31 -12.823 1 69.45 ? C5 EMO 303 A 1 HETATM 8 C C6 EMO . . . F 3 -29.34 42.255 -11.891 1 68.7 ? C6 EMO 303 A 1 HETATM 9 O O6 EMO . . . F 3 -28.931 41.067 -12.028 1 68.37 ? O6 EMO 303 A 1 HETATM 10 C C7 EMO . . . F 3 -30.264 42.603 -10.822 1 67.43 ? C7 EMO 303 A 1 HETATM 11 C C8 EMO . . . F 3 -30.75 41.581 -9.864 1 66.96 ? C8 EMO 303 A 1 HETATM 12 C C9 EMO . . . F 3 -31.684 41.956 -8.794 1 65.75 ? C9 EMO 303 A 1 HETATM 13 C C10 EMO . . . F 3 -32.199 40.922 -7.802 1 66.85 ? C10 EMO 303 A 1 HETATM 14 C C16 EMO . . . F 3 -32.134 43.303 -8.661 1 65.66 ? C16 EMO 303 A 1 HETATM 15 C C17 EMO . . . F 3 -31.676 44.323 -9.58 1 66.19 ? C17 EMO 303 A 1 HETATM 16 O O17 EMO . . . F 3 -32.165 45.563 -9.357 1 65.68 ? O17 EMO 303 A 1 HETATM 17 C C18 EMO . . . F 3 -30.745 44.015 -10.668 1 66.9 ? C18 EMO 303 A 1 HETATM 18 C C19 EMO . . . F 3 -30.267 45.049 -11.613 1 67.89 ? C19 EMO 303 A 1 HETATM 19 O O19 EMO . . . F 3 -30.676 46.229 -11.472 1 68.13 ? O19 EMO 303 A 1 HETATM 20 C C20 EMO . . . F 3 -29.348 44.736 -12.689 1 69.12 ? C20 EMO 303 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 380 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #