data_2RIT # _model_server_result.job_id qA0lzjrDoomO7qHfVsFrDg _model_server_result.datetime_utc '2024-10-13 09:13:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2rit # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 2RIT # _exptl.entry_id 2RIT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2RIT _cell.length_a 52.535 _cell.length_b 149.906 _cell.length_c 79.211 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RIT _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA,PQS dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -39.6055 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2RIT _atom_sites.fract_transf_matrix[1][1] 0.019035 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006671 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012625 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 1 1 GOL GOL . C 3 HOH A 1 356 1 HOH HOH . C 3 HOH A 2 357 2 HOH HOH . C 3 HOH A 3 358 3 HOH HOH . C 3 HOH A 4 359 4 HOH HOH . C 3 HOH A 5 360 5 HOH HOH . C 3 HOH A 6 361 6 HOH HOH . C 3 HOH A 7 362 7 HOH HOH . C 3 HOH A 8 363 8 HOH HOH . C 3 HOH A 9 364 9 HOH HOH . C 3 HOH A 10 365 10 HOH HOH . C 3 HOH A 11 366 11 HOH HOH . C 3 HOH A 12 367 12 HOH HOH . C 3 HOH A 13 368 13 HOH HOH . C 3 HOH A 14 369 14 HOH HOH . C 3 HOH A 15 370 15 HOH HOH . C 3 HOH A 16 371 16 HOH HOH . C 3 HOH A 17 372 17 HOH HOH . C 3 HOH A 18 373 18 HOH HOH . C 3 HOH A 19 374 19 HOH HOH . C 3 HOH A 20 375 20 HOH HOH . C 3 HOH A 21 376 21 HOH HOH . C 3 HOH A 22 377 22 HOH HOH . C 3 HOH A 23 378 23 HOH HOH . C 3 HOH A 24 379 24 HOH HOH . C 3 HOH A 25 380 25 HOH HOH . C 3 HOH A 26 381 26 HOH HOH . C 3 HOH A 27 382 27 HOH HOH . C 3 HOH A 28 383 28 HOH HOH . C 3 HOH A 29 384 29 HOH HOH . C 3 HOH A 30 385 30 HOH HOH . C 3 HOH A 31 386 31 HOH HOH . C 3 HOH A 32 387 32 HOH HOH . C 3 HOH A 33 388 33 HOH HOH . C 3 HOH A 34 389 34 HOH HOH . C 3 HOH A 35 390 35 HOH HOH . C 3 HOH A 36 391 36 HOH HOH . C 3 HOH A 37 392 37 HOH HOH . C 3 HOH A 38 393 38 HOH HOH . C 3 HOH A 39 394 39 HOH HOH . C 3 HOH A 40 395 40 HOH HOH . C 3 HOH A 41 396 41 HOH HOH . C 3 HOH A 42 397 42 HOH HOH . C 3 HOH A 43 398 43 HOH HOH . C 3 HOH A 44 399 44 HOH HOH . C 3 HOH A 45 400 45 HOH HOH . C 3 HOH A 46 401 46 HOH HOH . C 3 HOH A 47 402 47 HOH HOH . C 3 HOH A 48 403 48 HOH HOH . C 3 HOH A 49 404 49 HOH HOH . C 3 HOH A 50 405 50 HOH HOH . C 3 HOH A 51 406 51 HOH HOH . C 3 HOH A 52 407 52 HOH HOH . C 3 HOH A 53 408 53 HOH HOH . C 3 HOH A 54 409 54 HOH HOH . C 3 HOH A 55 410 55 HOH HOH . C 3 HOH A 56 411 56 HOH HOH . C 3 HOH A 57 412 57 HOH HOH . C 3 HOH A 58 413 58 HOH HOH . C 3 HOH A 59 414 59 HOH HOH . C 3 HOH A 60 415 60 HOH HOH . C 3 HOH A 61 416 61 HOH HOH . C 3 HOH A 62 417 62 HOH HOH . C 3 HOH A 63 418 63 HOH HOH . C 3 HOH A 64 419 64 HOH HOH . C 3 HOH A 65 420 65 HOH HOH . C 3 HOH A 66 421 66 HOH HOH . C 3 HOH A 67 422 67 HOH HOH . C 3 HOH A 68 423 68 HOH HOH . C 3 HOH A 69 424 69 HOH HOH . C 3 HOH A 70 425 70 HOH HOH . C 3 HOH A 71 426 71 HOH HOH . C 3 HOH A 72 427 72 HOH HOH . C 3 HOH A 73 428 73 HOH HOH . C 3 HOH A 74 429 74 HOH HOH . C 3 HOH A 75 430 75 HOH HOH . C 3 HOH A 76 431 76 HOH HOH . C 3 HOH A 77 432 77 HOH HOH . C 3 HOH A 78 433 78 HOH HOH . C 3 HOH A 79 434 79 HOH HOH . C 3 HOH A 80 435 80 HOH HOH . C 3 HOH A 81 436 81 HOH HOH . C 3 HOH A 82 437 82 HOH HOH . C 3 HOH A 83 438 83 HOH HOH . C 3 HOH A 84 439 84 HOH HOH . C 3 HOH A 85 440 85 HOH HOH . C 3 HOH A 86 441 86 HOH HOH . C 3 HOH A 87 442 87 HOH HOH . C 3 HOH A 88 443 88 HOH HOH . C 3 HOH A 89 444 89 HOH HOH . C 3 HOH A 90 445 90 HOH HOH . C 3 HOH A 91 446 91 HOH HOH . C 3 HOH A 92 447 92 HOH HOH . C 3 HOH A 93 448 93 HOH HOH . C 3 HOH A 94 449 94 HOH HOH . C 3 HOH A 95 450 95 HOH HOH . C 3 HOH A 96 451 96 HOH HOH . C 3 HOH A 97 452 97 HOH HOH . C 3 HOH A 98 453 98 HOH HOH . C 3 HOH A 99 454 99 HOH HOH . C 3 HOH A 100 455 100 HOH HOH . C 3 HOH A 101 456 101 HOH HOH . C 3 HOH A 102 457 102 HOH HOH . C 3 HOH A 103 458 103 HOH HOH . C 3 HOH A 104 459 104 HOH HOH . C 3 HOH A 105 460 105 HOH HOH . C 3 HOH A 106 461 106 HOH HOH . C 3 HOH A 107 462 107 HOH HOH . C 3 HOH A 108 463 108 HOH HOH . C 3 HOH A 109 464 109 HOH HOH . C 3 HOH A 110 465 110 HOH HOH . C 3 HOH A 111 466 111 HOH HOH . C 3 HOH A 112 467 112 HOH HOH . C 3 HOH A 113 468 113 HOH HOH . C 3 HOH A 114 469 114 HOH HOH . C 3 HOH A 115 470 115 HOH HOH . C 3 HOH A 116 471 116 HOH HOH . C 3 HOH A 117 472 117 HOH HOH . C 3 HOH A 118 473 118 HOH HOH . C 3 HOH A 119 474 119 HOH HOH . C 3 HOH A 120 475 120 HOH HOH . C 3 HOH A 121 476 121 HOH HOH . C 3 HOH A 122 477 122 HOH HOH . C 3 HOH A 123 478 123 HOH HOH . C 3 HOH A 124 479 124 HOH HOH . C 3 HOH A 125 480 125 HOH HOH . C 3 HOH A 126 481 126 HOH HOH . C 3 HOH A 127 482 127 HOH HOH . C 3 HOH A 128 483 128 HOH HOH . C 3 HOH A 129 484 129 HOH HOH . C 3 HOH A 130 485 130 HOH HOH . C 3 HOH A 131 486 131 HOH HOH . C 3 HOH A 132 487 132 HOH HOH . C 3 HOH A 133 488 133 HOH HOH . C 3 HOH A 134 489 134 HOH HOH . C 3 HOH A 135 490 135 HOH HOH . C 3 HOH A 136 491 136 HOH HOH . C 3 HOH A 137 492 137 HOH HOH . C 3 HOH A 138 493 138 HOH HOH . C 3 HOH A 139 494 139 HOH HOH . C 3 HOH A 140 495 140 HOH HOH . C 3 HOH A 141 496 141 HOH HOH . C 3 HOH A 142 497 142 HOH HOH . C 3 HOH A 143 498 143 HOH HOH . C 3 HOH A 144 499 144 HOH HOH . C 3 HOH A 145 500 145 HOH HOH . C 3 HOH A 146 501 146 HOH HOH . C 3 HOH A 147 502 147 HOH HOH . C 3 HOH A 148 503 148 HOH HOH . C 3 HOH A 149 504 149 HOH HOH . C 3 HOH A 150 505 150 HOH HOH . C 3 HOH A 151 506 151 HOH HOH . C 3 HOH A 152 507 152 HOH HOH . C 3 HOH A 153 508 153 HOH HOH . C 3 HOH A 154 509 154 HOH HOH . C 3 HOH A 155 510 155 HOH HOH . C 3 HOH A 156 511 156 HOH HOH . C 3 HOH A 157 512 157 HOH HOH . C 3 HOH A 158 513 158 HOH HOH . C 3 HOH A 159 514 159 HOH HOH . C 3 HOH A 160 515 160 HOH HOH . C 3 HOH A 161 516 161 HOH HOH . C 3 HOH A 162 517 162 HOH HOH . C 3 HOH A 163 518 163 HOH HOH . C 3 HOH A 164 519 164 HOH HOH . C 3 HOH A 165 520 165 HOH HOH . C 3 HOH A 166 521 166 HOH HOH . C 3 HOH A 167 522 167 HOH HOH . C 3 HOH A 168 523 168 HOH HOH . C 3 HOH A 169 524 169 HOH HOH . C 3 HOH A 170 525 170 HOH HOH . C 3 HOH A 171 526 171 HOH HOH . C 3 HOH A 172 527 172 HOH HOH . C 3 HOH A 173 528 173 HOH HOH . C 3 HOH A 174 529 174 HOH HOH . C 3 HOH A 175 530 175 HOH HOH . C 3 HOH A 176 531 176 HOH HOH . C 3 HOH A 177 532 177 HOH HOH . C 3 HOH A 178 533 178 HOH HOH . C 3 HOH A 179 534 179 HOH HOH . C 3 HOH A 180 535 180 HOH HOH . C 3 HOH A 181 536 181 HOH HOH . C 3 HOH A 182 537 182 HOH HOH . C 3 HOH A 183 538 183 HOH HOH . C 3 HOH A 184 539 184 HOH HOH . C 3 HOH A 185 540 185 HOH HOH . C 3 HOH A 186 541 186 HOH HOH . C 3 HOH A 187 542 187 HOH HOH . C 3 HOH A 188 543 188 HOH HOH . C 3 HOH A 189 544 189 HOH HOH . C 3 HOH A 190 545 190 HOH HOH . C 3 HOH A 191 546 191 HOH HOH . C 3 HOH A 192 547 192 HOH HOH . C 3 HOH A 193 548 193 HOH HOH . C 3 HOH A 194 549 194 HOH HOH . C 3 HOH A 195 550 195 HOH HOH . C 3 HOH A 196 551 196 HOH HOH . C 3 HOH A 197 552 197 HOH HOH . C 3 HOH A 198 553 198 HOH HOH . C 3 HOH A 199 554 199 HOH HOH . C 3 HOH A 200 555 200 HOH HOH . C 3 HOH A 201 556 201 HOH HOH . C 3 HOH A 202 557 202 HOH HOH . C 3 HOH A 203 558 203 HOH HOH . C 3 HOH A 204 559 204 HOH HOH . C 3 HOH A 205 560 205 HOH HOH . C 3 HOH A 206 561 206 HOH HOH . C 3 HOH A 207 562 207 HOH HOH . C 3 HOH A 208 563 208 HOH HOH . C 3 HOH A 209 564 209 HOH HOH . C 3 HOH A 210 565 210 HOH HOH . C 3 HOH A 211 566 211 HOH HOH . C 3 HOH A 212 567 212 HOH HOH . C 3 HOH A 213 568 213 HOH HOH . C 3 HOH A 214 569 214 HOH HOH . C 3 HOH A 215 570 215 HOH HOH . C 3 HOH A 216 571 216 HOH HOH . C 3 HOH A 217 572 217 HOH HOH . C 3 HOH A 218 573 218 HOH HOH . C 3 HOH A 219 574 219 HOH HOH . C 3 HOH A 220 575 220 HOH HOH . C 3 HOH A 221 576 221 HOH HOH . C 3 HOH A 222 577 222 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 -5.27 -12.578 6.307 1 23.61 ? C1 GOL 1 A 1 HETATM 2 O O1 GOL . . . B 2 -4.666 -11.404 6.802 1 22.15 ? O1 GOL 1 A 1 HETATM 3 C C2 GOL . . . B 2 -6.725 -12.634 6.77 1 24.63 ? C2 GOL 1 A 1 HETATM 4 O O2 GOL . . . B 2 -7.439 -11.586 6.163 1 25.56 ? O2 GOL 1 A 1 HETATM 5 C C3 GOL . . . B 2 -7.358 -13.975 6.404 1 24.29 ? C3 GOL 1 A 1 HETATM 6 O O3 GOL . . . B 2 -7.372 -14.151 5.002 1 22.47 ? O3 GOL 1 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #