data_2RJ9
#
_model_server_result.job_id            IBDY0XWkC0-rArBG6JlrEw 
_model_server_result.datetime_utc      '2024-11-07 12:37:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2rj9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1}' 
#
_entry.id    2RJ9 
#
_exptl.entry_id    2RJ9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2RJ9 
_cell.length_a            52.43 
_cell.length_b            149.93 
_cell.length_c            78.92 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2RJ9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA,PQS dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E 1 1 
A,B,C,D,E 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -39.46 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B MN MN . A MN 1 1_555 A OD2 ASP 150 A ASP 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? 
metalc ? metalc2 B MN MN . A MN 1 1_555 A OD1 ASP 152 A ASP 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? 
metalc ? metalc3 B MN MN . A MN 1 1_555 D O2B UDP . A UDP 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? 
metalc ? metalc4 B MN MN . A MN 1 1_555 D O1A UDP . A UDP 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc5 B MN MN . A MN 1 1_555 E O HOH . A HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2RJ9 
_atom_sites.fract_transf_matrix[1][1]    0.019073 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00667 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012671 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MN A 1 1 1 MN MN . 
C 3 AD7 A 1 356 356 AD7 AD7 . 
D 4 UDP A 1 357 357 UDP UDP . 
E 5 HOH A 1 358 358 HOH HOH . 
E 5 HOH A 2 359 359 HOH HOH . 
E 5 HOH A 3 360 360 HOH HOH . 
E 5 HOH A 4 361 361 HOH HOH . 
E 5 HOH A 5 362 362 HOH HOH . 
E 5 HOH A 6 363 363 HOH HOH . 
E 5 HOH A 7 364 364 HOH HOH . 
E 5 HOH A 8 365 365 HOH HOH . 
E 5 HOH A 9 366 366 HOH HOH . 
E 5 HOH A 10 367 367 HOH HOH . 
E 5 HOH A 11 368 368 HOH HOH . 
E 5 HOH A 12 369 369 HOH HOH . 
E 5 HOH A 13 370 370 HOH HOH . 
E 5 HOH A 14 371 371 HOH HOH . 
E 5 HOH A 15 372 372 HOH HOH . 
E 5 HOH A 16 373 373 HOH HOH . 
E 5 HOH A 17 374 374 HOH HOH . 
E 5 HOH A 18 375 375 HOH HOH . 
E 5 HOH A 19 376 376 HOH HOH . 
E 5 HOH A 20 377 377 HOH HOH . 
E 5 HOH A 21 378 378 HOH HOH . 
E 5 HOH A 22 379 379 HOH HOH . 
E 5 HOH A 23 380 380 HOH HOH . 
E 5 HOH A 24 381 381 HOH HOH . 
E 5 HOH A 25 382 382 HOH HOH . 
E 5 HOH A 26 383 383 HOH HOH . 
E 5 HOH A 27 384 384 HOH HOH . 
E 5 HOH A 28 385 385 HOH HOH . 
E 5 HOH A 29 386 386 HOH HOH . 
E 5 HOH A 30 387 387 HOH HOH . 
E 5 HOH A 31 388 388 HOH HOH . 
E 5 HOH A 32 389 389 HOH HOH . 
E 5 HOH A 33 390 390 HOH HOH . 
E 5 HOH A 34 391 391 HOH HOH . 
E 5 HOH A 35 392 392 HOH HOH . 
E 5 HOH A 36 393 393 HOH HOH . 
E 5 HOH A 37 394 394 HOH HOH . 
E 5 HOH A 38 395 395 HOH HOH . 
E 5 HOH A 39 396 396 HOH HOH . 
E 5 HOH A 40 397 397 HOH HOH . 
E 5 HOH A 41 398 398 HOH HOH . 
E 5 HOH A 42 399 399 HOH HOH . 
E 5 HOH A 43 400 400 HOH HOH . 
E 5 HOH A 44 401 401 HOH HOH . 
E 5 HOH A 45 402 402 HOH HOH . 
E 5 HOH A 46 403 403 HOH HOH . 
E 5 HOH A 47 404 404 HOH HOH . 
E 5 HOH A 48 405 405 HOH HOH . 
E 5 HOH A 49 406 406 HOH HOH . 
E 5 HOH A 50 407 407 HOH HOH . 
E 5 HOH A 51 408 408 HOH HOH . 
E 5 HOH A 52 409 409 HOH HOH . 
E 5 HOH A 53 410 410 HOH HOH . 
E 5 HOH A 54 411 411 HOH HOH . 
E 5 HOH A 55 412 412 HOH HOH . 
E 5 HOH A 56 413 413 HOH HOH . 
E 5 HOH A 57 414 414 HOH HOH . 
E 5 HOH A 58 415 415 HOH HOH . 
E 5 HOH A 59 416 416 HOH HOH . 
E 5 HOH A 60 417 417 HOH HOH . 
E 5 HOH A 61 418 418 HOH HOH . 
E 5 HOH A 62 419 419 HOH HOH . 
E 5 HOH A 63 420 420 HOH HOH . 
E 5 HOH A 64 421 421 HOH HOH . 
E 5 HOH A 65 422 422 HOH HOH . 
E 5 HOH A 66 423 423 HOH HOH . 
E 5 HOH A 67 424 424 HOH HOH . 
E 5 HOH A 68 425 425 HOH HOH . 
E 5 HOH A 69 426 426 HOH HOH . 
E 5 HOH A 70 427 427 HOH HOH . 
E 5 HOH A 71 428 428 HOH HOH . 
E 5 HOH A 72 429 429 HOH HOH . 
E 5 HOH A 73 430 430 HOH HOH . 
E 5 HOH A 74 431 431 HOH HOH . 
E 5 HOH A 75 432 432 HOH HOH . 
E 5 HOH A 76 433 433 HOH HOH . 
E 5 HOH A 77 434 434 HOH HOH . 
E 5 HOH A 78 435 435 HOH HOH . 
E 5 HOH A 79 436 436 HOH HOH . 
E 5 HOH A 80 437 437 HOH HOH . 
E 5 HOH A 81 438 438 HOH HOH . 
E 5 HOH A 82 439 439 HOH HOH . 
E 5 HOH A 83 440 440 HOH HOH . 
E 5 HOH A 84 441 441 HOH HOH . 
E 5 HOH A 85 442 442 HOH HOH . 
E 5 HOH A 86 443 443 HOH HOH . 
E 5 HOH A 87 444 444 HOH HOH . 
E 5 HOH A 88 445 445 HOH HOH . 
E 5 HOH A 89 446 446 HOH HOH . 
E 5 HOH A 90 447 447 HOH HOH . 
E 5 HOH A 91 448 448 HOH HOH . 
E 5 HOH A 92 449 449 HOH HOH . 
E 5 HOH A 93 450 450 HOH HOH . 
E 5 HOH A 94 451 451 HOH HOH . 
E 5 HOH A 95 452 452 HOH HOH . 
E 5 HOH A 96 453 453 HOH HOH . 
E 5 HOH A 97 454 454 HOH HOH . 
E 5 HOH A 98 455 455 HOH HOH . 
E 5 HOH A 99 456 456 HOH HOH . 
E 5 HOH A 100 457 457 HOH HOH . 
E 5 HOH A 101 458 458 HOH HOH . 
E 5 HOH A 102 459 459 HOH HOH . 
E 5 HOH A 103 460 460 HOH HOH . 
E 5 HOH A 104 461 461 HOH HOH . 
E 5 HOH A 105 462 462 HOH HOH . 
E 5 HOH A 106 463 463 HOH HOH . 
E 5 HOH A 107 464 464 HOH HOH . 
E 5 HOH A 108 465 465 HOH HOH . 
E 5 HOH A 109 466 466 HOH HOH . 
E 5 HOH A 110 467 467 HOH HOH . 
E 5 HOH A 111 468 468 HOH HOH . 
E 5 HOH A 112 469 469 HOH HOH . 
E 5 HOH A 113 470 470 HOH HOH . 
E 5 HOH A 114 471 471 HOH HOH . 
E 5 HOH A 115 472 472 HOH HOH . 
E 5 HOH A 116 473 473 HOH HOH . 
E 5 HOH A 117 474 474 HOH HOH . 
E 5 HOH A 118 475 475 HOH HOH . 
E 5 HOH A 119 476 476 HOH HOH . 
E 5 HOH A 120 477 477 HOH HOH . 
E 5 HOH A 121 478 478 HOH HOH . 
E 5 HOH A 122 479 479 HOH HOH . 
E 5 HOH A 123 480 480 HOH HOH . 
E 5 HOH A 124 481 481 HOH HOH . 
E 5 HOH A 125 482 482 HOH HOH . 
E 5 HOH A 126 483 483 HOH HOH . 
E 5 HOH A 127 484 484 HOH HOH . 
E 5 HOH A 128 485 485 HOH HOH . 
E 5 HOH A 129 486 486 HOH HOH . 
E 5 HOH A 130 487 487 HOH HOH . 
E 5 HOH A 131 488 488 HOH HOH . 
E 5 HOH A 132 489 489 HOH HOH . 
E 5 HOH A 133 490 490 HOH HOH . 
E 5 HOH A 134 491 491 HOH HOH . 
E 5 HOH A 135 492 492 HOH HOH . 
E 5 HOH A 136 493 493 HOH HOH . 
E 5 HOH A 137 494 494 HOH HOH . 
E 5 HOH A 138 495 495 HOH HOH . 
E 5 HOH A 139 496 496 HOH HOH . 
E 5 HOH A 140 497 497 HOH HOH . 
E 5 HOH A 141 498 498 HOH HOH . 
E 5 HOH A 142 499 499 HOH HOH . 
E 5 HOH A 143 500 500 HOH HOH . 
E 5 HOH A 144 501 501 HOH HOH . 
E 5 HOH A 145 502 502 HOH HOH . 
E 5 HOH A 146 503 503 HOH HOH . 
E 5 HOH A 147 504 504 HOH HOH . 
E 5 HOH A 148 505 505 HOH HOH . 
E 5 HOH A 149 506 506 HOH HOH . 
E 5 HOH A 150 507 507 HOH HOH . 
E 5 HOH A 151 508 508 HOH HOH . 
E 5 HOH A 152 509 509 HOH HOH . 
E 5 HOH A 153 510 510 HOH HOH . 
E 5 HOH A 154 511 511 HOH HOH . 
E 5 HOH A 155 512 512 HOH HOH . 
E 5 HOH A 156 513 513 HOH HOH . 
E 5 HOH A 157 514 514 HOH HOH . 
E 5 HOH A 158 515 515 HOH HOH . 
E 5 HOH A 159 516 516 HOH HOH . 
E 5 HOH A 160 517 517 HOH HOH . 
E 5 HOH A 161 518 518 HOH HOH . 
E 5 HOH A 162 519 519 HOH HOH . 
E 5 HOH A 163 520 520 HOH HOH . 
E 5 HOH A 164 521 521 HOH HOH . 
E 5 HOH A 165 522 522 HOH HOH . 
E 5 HOH A 166 523 523 HOH HOH . 
E 5 HOH A 167 524 524 HOH HOH . 
E 5 HOH A 168 525 525 HOH HOH . 
E 5 HOH A 169 526 526 HOH HOH . 
E 5 HOH A 170 527 527 HOH HOH . 
E 5 HOH A 171 528 528 HOH HOH . 
E 5 HOH A 172 529 529 HOH HOH . 
E 5 HOH A 173 530 530 HOH HOH . 
E 5 HOH A 174 531 531 HOH HOH . 
E 5 HOH A 175 532 532 HOH HOH . 
E 5 HOH A 176 533 533 HOH HOH . 
E 5 HOH A 177 534 534 HOH HOH . 
E 5 HOH A 178 535 535 HOH HOH . 
E 5 HOH A 179 536 536 HOH HOH . 
E 5 HOH A 180 537 537 HOH HOH . 
E 5 HOH A 181 538 538 HOH HOH . 
E 5 HOH A 182 539 539 HOH HOH . 
E 5 HOH A 183 540 540 HOH HOH . 
E 5 HOH A 184 541 541 HOH HOH . 
E 5 HOH A 185 542 542 HOH HOH . 
E 5 HOH A 186 543 543 HOH HOH . 
E 5 HOH A 187 544 544 HOH HOH . 
E 5 HOH A 188 545 545 HOH HOH . 
E 5 HOH A 189 546 546 HOH HOH . 
E 5 HOH A 190 547 547 HOH HOH . 
E 5 HOH A 191 548 548 HOH HOH . 
E 5 HOH A 192 549 549 HOH HOH . 
E 5 HOH A 193 550 550 HOH HOH . 
E 5 HOH A 194 551 551 HOH HOH . 
E 5 HOH A 195 552 552 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -15.052 
_atom_site.Cartn_y               -16.922 
_atom_site.Cartn_z               4.284 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        23.92 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           1 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           391 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           1 
#