data_2RLA # _model_server_result.job_id nZUJd9fnusgF_nCOhceKmg _model_server_result.datetime_utc '2024-10-14 04:24:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2rla # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":502}' # _entry.id 2RLA # _exptl.entry_id 2RLA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2RLA _cell.length_a 88.5 _cell.length_b 88.5 _cell.length_c 106 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2RLA _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 124 A ASP 124 1_555 D MN MN . A MN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc2 A ND1 HIS 126 A HIS 126 1_555 D MN MN . A MN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc3 A OD2 ASP 232 A ASP 232 1_555 D MN MN . A MN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc4 A OD2 ASP 234 A ASP 234 1_555 D MN MN . A MN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc5 A OD1 ASP 234 A ASP 234 1_555 D MN MN . A MN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? metalc ? metalc6 B OD1 ASP 124 B ASP 124 1_555 E MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc7 B ND1 HIS 126 B HIS 126 1_555 E MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc8 B OD2 ASP 232 B ASP 232 1_555 E MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc9 B OD2 ASP 234 B ASP 234 1_555 E MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc10 B OD1 ASP 234 B ASP 234 1_555 E MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc11 C OD1 ASP 124 C ASP 124 1_555 F MN MN . C MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc12 C ND1 HIS 126 C HIS 126 1_555 F MN MN . C MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc13 C OD2 ASP 232 C ASP 232 1_555 F MN MN . C MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc14 C OD2 ASP 234 C ASP 234 1_555 F MN MN . C MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc15 C OD1 ASP 234 C ASP 234 1_555 F MN MN . C MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2RLA _atom_sites.fract_transf_matrix[1][1] 0.011299 _atom_sites.fract_transf_matrix[1][2] 0.006524 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013047 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009434 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 MN A 1 500 500 MN MN . E 2 MN B 1 501 501 MN MN . F 2 MN C 1 502 502 MN MN . G 3 HOH A 1 501 1 HOH HOH . G 3 HOH A 2 502 2 HOH HOH . G 3 HOH A 3 503 3 HOH HOH . G 3 HOH A 4 504 4 HOH HOH . G 3 HOH A 5 505 5 HOH HOH . G 3 HOH A 6 506 6 HOH HOH . G 3 HOH A 7 507 7 HOH HOH . G 3 HOH A 8 508 8 HOH HOH . G 3 HOH A 9 509 9 HOH HOH . G 3 HOH A 10 510 10 HOH HOH . G 3 HOH A 11 511 17 HOH HOH . H 3 HOH B 1 502 11 HOH HOH . H 3 HOH B 2 503 12 HOH HOH . H 3 HOH B 3 504 13 HOH HOH . H 3 HOH B 4 505 14 HOH HOH . H 3 HOH B 5 506 15 HOH HOH . H 3 HOH B 6 507 16 HOH HOH . H 3 HOH B 7 508 18 HOH HOH . I 3 HOH C 1 503 19 HOH HOH . I 3 HOH C 2 504 20 HOH HOH . I 3 HOH C 3 505 21 HOH HOH . I 3 HOH C 4 506 22 HOH HOH . I 3 HOH C 5 507 23 HOH HOH . I 3 HOH C 6 508 24 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 43.207 _atom_site.Cartn_y 35.175 _atom_site.Cartn_z 0.99 _atom_site.occupancy 0.98 _atom_site.B_iso_or_equiv 16.67 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 502 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #