data_2SAR # _model_server_result.job_id cGaxQDek1J9HI_SZbDHiyA _model_server_result.datetime_utc '2024-11-25 09:54:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2sar # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":98}' # _entry.id 2SAR # _exptl.entry_id 2SAR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 363.221 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-3'-MONOPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2SAR _cell.length_a 64.9 _cell.length_b 78.32 _cell.length_c 38.79 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2SAR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 7 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? disulf ? disulf2 B SG CYS 7 B CYS 7 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? # _chem_comp.formula 'C10 H14 N5 O8 P' _chem_comp.formula_weight 363.221 _chem_comp.id 3GP _chem_comp.mon_nstd_flag . _chem_comp.name "GUANOSINE-3'-MONOPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P 3GP doub 1 n n P O2P 3GP sing 2 n n P O3P 3GP sing 3 n n P O3' 3GP sing 4 n n O2P HOP2 3GP sing 5 n n O3P HOP3 3GP sing 6 n n O5' C5' 3GP sing 7 n n O5' HO5' 3GP sing 8 n n C5' C4' 3GP sing 9 n n C5' "H5'1" 3GP sing 10 n n C5' "H5'2" 3GP sing 11 n n C4' O4' 3GP sing 12 n n C4' C3' 3GP sing 13 n n C4' H4' 3GP sing 14 n n O4' C1' 3GP sing 15 n n C3' O3' 3GP sing 16 n n C3' C2' 3GP sing 17 n n C3' H3' 3GP sing 18 n n C2' O2' 3GP sing 19 n n C2' C1' 3GP sing 20 n n C2' H2' 3GP sing 21 n n O2' HO2' 3GP sing 22 n n C1' N9 3GP sing 23 n n C1' H1' 3GP sing 24 n n N9 C8 3GP sing 25 n y N9 C4 3GP sing 26 n y C8 N7 3GP doub 27 n y C8 H8 3GP sing 28 n n N7 C5 3GP sing 29 n y C5 C6 3GP sing 30 n n C5 C4 3GP doub 31 n y C6 O6 3GP doub 32 n n C6 N1 3GP sing 33 n n N1 C2 3GP sing 34 n n N1 HN1 3GP sing 35 n n C2 N2 3GP sing 36 n n C2 N3 3GP doub 37 n n N2 HN21 3GP sing 38 n n N2 HN22 3GP sing 39 n n N3 C4 3GP sing 40 n n # _atom_sites.entry_id 2SAR _atom_sites.fract_transf_matrix[1][1] 0.01541 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01277 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02578 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 97 97 SO4 SO4 . D 3 3GP A 1 98 98 3GP GMP . E 2 SO4 B 1 97 97 SO4 SO4 . F 4 HOH A 1 99 5 HOH HOH . F 4 HOH A 2 100 6 HOH HOH . F 4 HOH A 3 101 9 HOH HOH . F 4 HOH A 4 102 22 HOH HOH . F 4 HOH A 5 103 23 HOH HOH . F 4 HOH A 6 104 24 HOH HOH . F 4 HOH A 7 105 25 HOH HOH . F 4 HOH A 8 106 26 HOH HOH . F 4 HOH A 9 107 27 HOH HOH . F 4 HOH A 10 108 28 HOH HOH . F 4 HOH A 11 109 29 HOH HOH . F 4 HOH A 12 110 30 HOH HOH . F 4 HOH A 13 111 31 HOH HOH . F 4 HOH A 14 112 32 HOH HOH . F 4 HOH A 15 113 33 HOH HOH . F 4 HOH A 16 114 34 HOH HOH . F 4 HOH A 17 115 35 HOH HOH . F 4 HOH A 18 116 36 HOH HOH . F 4 HOH A 19 117 37 HOH HOH . F 4 HOH A 20 118 38 HOH HOH . F 4 HOH A 21 119 40 HOH HOH . F 4 HOH A 22 120 41 HOH HOH . F 4 HOH A 23 121 42 HOH HOH . F 4 HOH A 24 122 43 HOH HOH . F 4 HOH A 25 123 44 HOH HOH . F 4 HOH A 26 124 45 HOH HOH . F 4 HOH A 27 125 46 HOH HOH . F 4 HOH A 28 126 51 HOH HOH . F 4 HOH A 29 127 53 HOH HOH . F 4 HOH A 30 128 54 HOH HOH . F 4 HOH A 31 129 58 HOH HOH . F 4 HOH A 32 130 59 HOH HOH . F 4 HOH A 33 131 60 HOH HOH . F 4 HOH A 34 132 61 HOH HOH . F 4 HOH A 35 133 62 HOH HOH . F 4 HOH A 36 134 64 HOH HOH . F 4 HOH A 37 135 65 HOH HOH . F 4 HOH A 38 136 146 HOH HOH . F 4 HOH A 39 137 147 HOH HOH . F 4 HOH A 40 138 148 HOH HOH . F 4 HOH A 41 139 149 HOH HOH . F 4 HOH A 42 140 150 HOH HOH . F 4 HOH A 43 141 151 HOH HOH . F 4 HOH A 44 142 152 HOH HOH . F 4 HOH A 45 143 153 HOH HOH . F 4 HOH A 46 144 154 HOH HOH . F 4 HOH A 47 145 155 HOH HOH . F 4 HOH A 48 146 156 HOH HOH . F 4 HOH A 49 147 157 HOH HOH . F 4 HOH A 50 148 158 HOH HOH . F 4 HOH A 51 149 159 HOH HOH . F 4 HOH A 52 150 160 HOH HOH . F 4 HOH A 53 151 161 HOH HOH . F 4 HOH A 54 152 162 HOH HOH . F 4 HOH A 55 153 163 HOH HOH . F 4 HOH A 56 154 164 HOH HOH . F 4 HOH A 57 155 165 HOH HOH . F 4 HOH A 58 156 166 HOH HOH . F 4 HOH A 59 157 167 HOH HOH . F 4 HOH A 60 158 168 HOH HOH . F 4 HOH A 61 159 169 HOH HOH . F 4 HOH A 62 160 170 HOH HOH . F 4 HOH A 63 161 171 HOH HOH . F 4 HOH A 64 162 172 HOH HOH . F 4 HOH A 65 163 173 HOH HOH . F 4 HOH A 66 164 174 HOH HOH . F 4 HOH A 67 165 175 HOH HOH . F 4 HOH A 68 166 176 HOH HOH . F 4 HOH A 69 167 177 HOH HOH . F 4 HOH A 70 168 178 HOH HOH . F 4 HOH A 71 169 179 HOH HOH . F 4 HOH A 72 170 180 HOH HOH . F 4 HOH A 73 171 181 HOH HOH . F 4 HOH A 74 172 182 HOH HOH . F 4 HOH A 75 173 183 HOH HOH . F 4 HOH A 76 174 184 HOH HOH . F 4 HOH A 77 175 185 HOH HOH . F 4 HOH A 78 176 186 HOH HOH . F 4 HOH A 79 177 187 HOH HOH . F 4 HOH A 80 178 188 HOH HOH . F 4 HOH A 81 179 189 HOH HOH . F 4 HOH A 82 180 190 HOH HOH . F 4 HOH A 83 181 191 HOH HOH . F 4 HOH A 84 182 192 HOH HOH . F 4 HOH A 85 183 193 HOH HOH . F 4 HOH A 86 184 194 HOH HOH . F 4 HOH A 87 185 195 HOH HOH . F 4 HOH A 88 186 196 HOH HOH . F 4 HOH A 89 187 197 HOH HOH . F 4 HOH A 90 188 198 HOH HOH . F 4 HOH A 91 189 199 HOH HOH . F 4 HOH A 92 190 200 HOH HOH . F 4 HOH A 93 191 201 HOH HOH . F 4 HOH A 94 192 202 HOH HOH . F 4 HOH A 95 193 203 HOH HOH . F 4 HOH A 96 194 204 HOH HOH . F 4 HOH A 97 195 205 HOH HOH . F 4 HOH A 98 196 206 HOH HOH . F 4 HOH A 99 197 207 HOH HOH . F 4 HOH A 100 198 208 HOH HOH . F 4 HOH A 101 199 209 HOH HOH . F 4 HOH A 102 200 210 HOH HOH . F 4 HOH A 103 201 211 HOH HOH . F 4 HOH A 104 202 212 HOH HOH . F 4 HOH A 105 203 213 HOH HOH . F 4 HOH A 106 204 214 HOH HOH . F 4 HOH A 107 205 215 HOH HOH . F 4 HOH A 108 206 216 HOH HOH . F 4 HOH A 109 207 217 HOH HOH . F 4 HOH A 110 208 218 HOH HOH . F 4 HOH A 111 209 219 HOH HOH . F 4 HOH A 112 210 220 HOH HOH . F 4 HOH A 113 211 221 HOH HOH . F 4 HOH A 114 212 222 HOH HOH . G 4 HOH B 1 98 1 HOH HOH . G 4 HOH B 2 99 2 HOH HOH . G 4 HOH B 3 100 3 HOH HOH . G 4 HOH B 4 101 4 HOH HOH . G 4 HOH B 5 102 7 HOH HOH . G 4 HOH B 6 103 8 HOH HOH . G 4 HOH B 7 104 10 HOH HOH . G 4 HOH B 8 105 11 HOH HOH . G 4 HOH B 9 106 12 HOH HOH . G 4 HOH B 10 107 13 HOH HOH . G 4 HOH B 11 108 14 HOH HOH . G 4 HOH B 12 109 15 HOH HOH . G 4 HOH B 13 110 16 HOH HOH . G 4 HOH B 14 111 17 HOH HOH . G 4 HOH B 15 112 18 HOH HOH . G 4 HOH B 16 113 19 HOH HOH . G 4 HOH B 17 114 20 HOH HOH . G 4 HOH B 18 115 21 HOH HOH . G 4 HOH B 19 116 39 HOH HOH . G 4 HOH B 20 117 47 HOH HOH . G 4 HOH B 21 118 48 HOH HOH . G 4 HOH B 22 119 49 HOH HOH . G 4 HOH B 23 120 50 HOH HOH . G 4 HOH B 24 121 52 HOH HOH . G 4 HOH B 25 122 55 HOH HOH . G 4 HOH B 26 123 56 HOH HOH . G 4 HOH B 27 124 57 HOH HOH . G 4 HOH B 28 125 63 HOH HOH . G 4 HOH B 29 126 66 HOH HOH . G 4 HOH B 30 127 67 HOH HOH . G 4 HOH B 31 128 68 HOH HOH . G 4 HOH B 32 129 69 HOH HOH . G 4 HOH B 33 130 70 HOH HOH . G 4 HOH B 34 131 71 HOH HOH . G 4 HOH B 35 132 72 HOH HOH . G 4 HOH B 36 133 73 HOH HOH . G 4 HOH B 37 134 74 HOH HOH . G 4 HOH B 38 135 75 HOH HOH . G 4 HOH B 39 136 76 HOH HOH . G 4 HOH B 40 137 77 HOH HOH . G 4 HOH B 41 138 78 HOH HOH . G 4 HOH B 42 139 79 HOH HOH . G 4 HOH B 43 140 80 HOH HOH . G 4 HOH B 44 141 81 HOH HOH . G 4 HOH B 45 142 82 HOH HOH . G 4 HOH B 46 143 83 HOH HOH . G 4 HOH B 47 144 84 HOH HOH . G 4 HOH B 48 145 85 HOH HOH . G 4 HOH B 49 146 86 HOH HOH . G 4 HOH B 50 147 87 HOH HOH . G 4 HOH B 51 148 88 HOH HOH . G 4 HOH B 52 149 89 HOH HOH . G 4 HOH B 53 150 90 HOH HOH . G 4 HOH B 54 151 91 HOH HOH . G 4 HOH B 55 152 92 HOH HOH . G 4 HOH B 56 153 93 HOH HOH . G 4 HOH B 57 154 94 HOH HOH . G 4 HOH B 58 155 95 HOH HOH . G 4 HOH B 59 156 96 HOH HOH . G 4 HOH B 60 157 97 HOH HOH . G 4 HOH B 61 158 98 HOH HOH . G 4 HOH B 62 159 99 HOH HOH . G 4 HOH B 63 160 100 HOH HOH . G 4 HOH B 64 161 101 HOH HOH . G 4 HOH B 65 162 102 HOH HOH . G 4 HOH B 66 163 103 HOH HOH . G 4 HOH B 67 164 104 HOH HOH . G 4 HOH B 68 165 105 HOH HOH . G 4 HOH B 69 166 106 HOH HOH . G 4 HOH B 70 167 107 HOH HOH . G 4 HOH B 71 168 108 HOH HOH . G 4 HOH B 72 169 109 HOH HOH . G 4 HOH B 73 170 110 HOH HOH . G 4 HOH B 74 171 111 HOH HOH . G 4 HOH B 75 172 112 HOH HOH . G 4 HOH B 76 173 113 HOH HOH . G 4 HOH B 77 174 114 HOH HOH . G 4 HOH B 78 175 115 HOH HOH . G 4 HOH B 79 176 116 HOH HOH . G 4 HOH B 80 177 117 HOH HOH . G 4 HOH B 81 178 118 HOH HOH . G 4 HOH B 82 179 119 HOH HOH . G 4 HOH B 83 180 120 HOH HOH . G 4 HOH B 84 181 121 HOH HOH . G 4 HOH B 85 182 122 HOH HOH . G 4 HOH B 86 183 123 HOH HOH . G 4 HOH B 87 184 124 HOH HOH . G 4 HOH B 88 185 125 HOH HOH . G 4 HOH B 89 186 126 HOH HOH . G 4 HOH B 90 187 127 HOH HOH . G 4 HOH B 91 188 128 HOH HOH . G 4 HOH B 92 189 129 HOH HOH . G 4 HOH B 93 190 130 HOH HOH . G 4 HOH B 94 191 131 HOH HOH . G 4 HOH B 95 192 132 HOH HOH . G 4 HOH B 96 193 133 HOH HOH . G 4 HOH B 97 194 134 HOH HOH . G 4 HOH B 98 195 135 HOH HOH . G 4 HOH B 99 196 136 HOH HOH . G 4 HOH B 100 197 137 HOH HOH . G 4 HOH B 101 198 138 HOH HOH . G 4 HOH B 102 199 139 HOH HOH . G 4 HOH B 103 200 140 HOH HOH . G 4 HOH B 104 201 141 HOH HOH . G 4 HOH B 105 202 142 HOH HOH . G 4 HOH B 106 203 143 HOH HOH . G 4 HOH B 107 204 144 HOH HOH . G 4 HOH B 108 205 145 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 3GP . . . D 3 59.735 10.828 20.9 1 31.25 ? P 3GP 98 A 1 HETATM 2 O O1P 3GP . . . D 3 59.819 10.33 19.416 1 31.08 ? O1P 3GP 98 A 1 HETATM 3 O O2P 3GP . . . D 3 60.502 10.064 21.976 1 34.46 ? O2P 3GP 98 A 1 HETATM 4 O O3P 3GP . . . D 3 60.017 12.297 20.954 1 35.31 ? O3P 3GP 98 A 1 HETATM 5 O O5' 3GP . . . D 3 57.09 6.516 22.266 1 26.06 ? O5' 3GP 98 A 1 HETATM 6 C C5' 3GP . . . D 3 58.149 6.893 21.304 1 25.87 ? C5' 3GP 98 A 1 HETATM 7 C C4' 3GP . . . D 3 57.883 8.345 20.881 1 29.52 ? C4' 3GP 98 A 1 HETATM 8 O O4' 3GP . . . D 3 56.569 8.338 20.232 1 30.82 ? O4' 3GP 98 A 1 HETATM 9 C C3' 3GP . . . D 3 57.808 9.438 21.943 1 26.08 ? C3' 3GP 98 A 1 HETATM 10 O O3' 3GP . . . D 3 58.179 10.695 21.418 1 33.33 ? O3' 3GP 98 A 1 HETATM 11 C C2' 3GP . . . D 3 56.331 9.569 22.342 1 20.76 ? C2' 3GP 98 A 1 HETATM 12 O O2' 3GP . . . D 3 55.988 10.928 22.635 1 20.78 ? O2' 3GP 98 A 1 HETATM 13 C C1' 3GP . . . D 3 55.73 9.332 20.952 1 28.64 ? C1' 3GP 98 A 1 HETATM 14 N N9 3GP . . . D 3 54.364 8.824 20.747 1 26.56 ? N9 3GP 98 A 1 HETATM 15 C C8 3GP . . . D 3 53.847 7.515 20.843 1 21.05 ? C8 3GP 98 A 1 HETATM 16 N N7 3GP . . . D 3 52.604 7.489 20.454 1 19.78 ? N7 3GP 98 A 1 HETATM 17 C C5 3GP . . . D 3 52.314 8.845 20.12 1 21.87 ? C5 3GP 98 A 1 HETATM 18 C C6 3GP . . . D 3 51.162 9.52 19.561 1 20.69 ? C6 3GP 98 A 1 HETATM 19 O O6 3GP . . . D 3 50.113 8.906 19.326 1 27.35 ? O6 3GP 98 A 1 HETATM 20 N N1 3GP . . . D 3 51.347 10.896 19.343 1 22.55 ? N1 3GP 98 A 1 HETATM 21 C C2 3GP . . . D 3 52.499 11.662 19.546 1 21.55 ? C2 3GP 98 A 1 HETATM 22 N N2 3GP . . . D 3 52.446 12.955 19.226 1 24.86 ? N2 3GP 98 A 1 HETATM 23 N N3 3GP . . . D 3 53.547 11.028 20.03 1 20.04 ? N3 3GP 98 A 1 HETATM 24 C C4 3GP . . . D 3 53.406 9.708 20.283 1 23 ? C4 3GP 98 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #