data_2TMN # _model_server_result.job_id oyyzcqKRRTB63t03IrkWtA _model_server_result.datetime_utc '2024-11-22 12:51:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2tmn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":317}' # _entry.id 2TMN # _exptl.entry_id 2TMN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2TMN _cell.length_a 94.1 _cell.length_b 94.1 _cell.length_c 131.4 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2TMN _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 57 E ASP 57 1_555 D CA CA . E CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc2 A OD1 ASP 57 E ASP 57 1_555 D CA CA . E CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc3 A OD1 ASP 59 E ASP 59 1_555 D CA CA . E CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc4 A O GLN 61 E GLN 61 1_555 D CA CA . E CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc5 A OD1 ASP 138 E ASP 138 1_555 B CA CA . E CA 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc6 A NE2 HIS 142 E HIS 142 1_555 F ZN ZN . E ZN 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc7 A NE2 HIS 146 E HIS 146 1_555 F ZN ZN . E ZN 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc8 A OE1 GLU 166 E GLU 166 1_555 F ZN ZN . E ZN 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc9 A OE1 GLU 177 E GLU 177 1_555 B CA CA . E CA 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc10 A OE2 GLU 177 E GLU 177 1_555 B CA CA . E CA 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.9 ? metalc ? metalc11 A OE2 GLU 177 E GLU 177 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc12 A O ASN 183 E ASN 183 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc13 A OD2 ASP 185 E ASP 185 1_555 B CA CA . E CA 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc14 A OD1 ASP 185 E ASP 185 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc15 A O GLU 187 E GLU 187 1_555 B CA CA . E CA 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc16 A OE2 GLU 190 E GLU 190 1_555 B CA CA . E CA 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc17 A OE1 GLU 190 E GLU 190 1_555 B CA CA . E CA 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc18 A OE2 GLU 190 E GLU 190 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc19 A O TYR 193 E TYR 193 1_555 E CA CA . E CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc20 A OG1 THR 194 E THR 194 1_555 E CA CA . E CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc21 A O THR 194 E THR 194 1_555 E CA CA . E CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc22 A O ILE 197 E ILE 197 1_555 E CA CA . E CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc23 A OD1 ASP 200 E ASP 200 1_555 E CA CA . E CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc24 B CA CA . E CA 317 1_555 H O HOH . E HOH 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc25 C CA CA . E CA 318 1_555 H O HOH . E HOH 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc26 C CA CA . E CA 318 1_555 H O HOH . E HOH 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc27 D CA CA . E CA 319 1_555 H O HOH . E HOH 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc28 D CA CA . E CA 319 1_555 H O HOH . E HOH 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc29 D CA CA . E CA 319 1_555 H O HOH . E HOH 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc30 E CA CA . E CA 320 1_555 H O HOH . E HOH 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc31 E CA CA . E CA 320 1_555 H O HOH . E HOH 436 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc32 F ZN ZN . E ZN 321 1_555 G O2 0FA . E 0FA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2TMN _atom_sites.fract_transf_matrix[1][1] 0.010627 _atom_sites.fract_transf_matrix[1][2] 0.006135 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012271 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00761 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA E 1 317 317 CA CA . C 2 CA E 1 318 318 CA CA . D 2 CA E 1 319 319 CA CA . E 2 CA E 1 320 320 CA CA . F 3 ZN E 1 321 321 ZN ZN . G 4 0FA E 1 322 322 0FA LEP . H 5 HOH E 1 325 325 HOH HOH . H 5 HOH E 2 326 326 HOH HOH . H 5 HOH E 3 327 327 HOH HOH . H 5 HOH E 4 328 328 HOH HOH . H 5 HOH E 5 329 329 HOH HOH . H 5 HOH E 6 330 330 HOH HOH . H 5 HOH E 7 331 331 HOH HOH . H 5 HOH E 8 332 332 HOH HOH . H 5 HOH E 9 333 333 HOH HOH . H 5 HOH E 10 334 334 HOH HOH . H 5 HOH E 11 335 335 HOH HOH . H 5 HOH E 12 336 336 HOH HOH . H 5 HOH E 13 337 337 HOH HOH . H 5 HOH E 14 338 338 HOH HOH . H 5 HOH E 15 339 339 HOH HOH . H 5 HOH E 16 340 340 HOH HOH . H 5 HOH E 17 341 341 HOH HOH . H 5 HOH E 18 342 342 HOH HOH . H 5 HOH E 19 343 343 HOH HOH . H 5 HOH E 20 344 344 HOH HOH . H 5 HOH E 21 345 345 HOH HOH . H 5 HOH E 22 346 346 HOH HOH . H 5 HOH E 23 347 347 HOH HOH . H 5 HOH E 24 348 348 HOH HOH . H 5 HOH E 25 349 349 HOH HOH . H 5 HOH E 26 350 350 HOH HOH . H 5 HOH E 27 351 351 HOH HOH . H 5 HOH E 28 352 352 HOH HOH . H 5 HOH E 29 353 353 HOH HOH . H 5 HOH E 30 354 354 HOH HOH . H 5 HOH E 31 355 355 HOH HOH . H 5 HOH E 32 356 356 HOH HOH . H 5 HOH E 33 357 357 HOH HOH . H 5 HOH E 34 358 358 HOH HOH . H 5 HOH E 35 359 359 HOH HOH . H 5 HOH E 36 360 360 HOH HOH . H 5 HOH E 37 361 361 HOH HOH . H 5 HOH E 38 362 362 HOH HOH . H 5 HOH E 39 363 363 HOH HOH . H 5 HOH E 40 364 364 HOH HOH . H 5 HOH E 41 365 365 HOH HOH . H 5 HOH E 42 366 366 HOH HOH . H 5 HOH E 43 367 367 HOH HOH . H 5 HOH E 44 368 368 HOH HOH . H 5 HOH E 45 369 369 HOH HOH . H 5 HOH E 46 370 370 HOH HOH . H 5 HOH E 47 371 371 HOH HOH . H 5 HOH E 48 372 372 HOH HOH . H 5 HOH E 49 373 373 HOH HOH . H 5 HOH E 50 374 374 HOH HOH . H 5 HOH E 51 375 375 HOH HOH . H 5 HOH E 52 376 376 HOH HOH . H 5 HOH E 53 377 377 HOH HOH . H 5 HOH E 54 378 378 HOH HOH . H 5 HOH E 55 379 379 HOH HOH . H 5 HOH E 56 380 380 HOH HOH . H 5 HOH E 57 381 381 HOH HOH . H 5 HOH E 58 382 382 HOH HOH . H 5 HOH E 59 383 383 HOH HOH . H 5 HOH E 60 384 384 HOH HOH . H 5 HOH E 61 385 385 HOH HOH . H 5 HOH E 62 386 386 HOH HOH . H 5 HOH E 63 387 387 HOH HOH . H 5 HOH E 64 388 388 HOH HOH . H 5 HOH E 65 389 389 HOH HOH . H 5 HOH E 66 390 390 HOH HOH . H 5 HOH E 67 391 391 HOH HOH . H 5 HOH E 68 392 392 HOH HOH . H 5 HOH E 69 393 393 HOH HOH . H 5 HOH E 70 394 394 HOH HOH . H 5 HOH E 71 395 395 HOH HOH . H 5 HOH E 72 396 396 HOH HOH . H 5 HOH E 73 397 397 HOH HOH . H 5 HOH E 74 398 398 HOH HOH . H 5 HOH E 75 399 399 HOH HOH . H 5 HOH E 76 400 400 HOH HOH . H 5 HOH E 77 401 401 HOH HOH . H 5 HOH E 78 402 402 HOH HOH . H 5 HOH E 79 403 403 HOH HOH . H 5 HOH E 80 404 404 HOH HOH . H 5 HOH E 81 405 405 HOH HOH . H 5 HOH E 82 406 406 HOH HOH . H 5 HOH E 83 407 407 HOH HOH . H 5 HOH E 84 408 408 HOH HOH . H 5 HOH E 85 409 409 HOH HOH . H 5 HOH E 86 410 410 HOH HOH . H 5 HOH E 87 411 411 HOH HOH . H 5 HOH E 88 412 412 HOH HOH . H 5 HOH E 89 413 413 HOH HOH . H 5 HOH E 90 414 414 HOH HOH . H 5 HOH E 91 415 415 HOH HOH . H 5 HOH E 92 416 416 HOH HOH . H 5 HOH E 93 417 417 HOH HOH . H 5 HOH E 94 418 418 HOH HOH . H 5 HOH E 95 419 419 HOH HOH . H 5 HOH E 96 420 420 HOH HOH . H 5 HOH E 97 421 421 HOH HOH . H 5 HOH E 98 422 422 HOH HOH . H 5 HOH E 99 423 423 HOH HOH . H 5 HOH E 100 424 424 HOH HOH . H 5 HOH E 101 425 425 HOH HOH . H 5 HOH E 102 426 426 HOH HOH . H 5 HOH E 103 427 427 HOH HOH . H 5 HOH E 104 428 428 HOH HOH . H 5 HOH E 105 429 429 HOH HOH . H 5 HOH E 106 430 430 HOH HOH . H 5 HOH E 107 431 431 HOH HOH . H 5 HOH E 108 432 432 HOH HOH . H 5 HOH E 109 433 433 HOH HOH . H 5 HOH E 110 434 434 HOH HOH . H 5 HOH E 111 435 435 HOH HOH . H 5 HOH E 112 436 436 HOH HOH . H 5 HOH E 113 437 437 HOH HOH . H 5 HOH E 114 438 438 HOH HOH . H 5 HOH E 115 439 439 HOH HOH . H 5 HOH E 116 440 440 HOH HOH . H 5 HOH E 117 441 441 HOH HOH . H 5 HOH E 118 442 442 HOH HOH . H 5 HOH E 119 443 443 HOH HOH . H 5 HOH E 120 444 444 HOH HOH . H 5 HOH E 121 445 445 HOH HOH . H 5 HOH E 122 446 446 HOH HOH . H 5 HOH E 123 447 447 HOH HOH . H 5 HOH E 124 448 448 HOH HOH . H 5 HOH E 125 449 449 HOH HOH . H 5 HOH E 126 450 450 HOH HOH . H 5 HOH E 127 451 451 HOH HOH . H 5 HOH E 128 452 452 HOH HOH . H 5 HOH E 129 453 453 HOH HOH . H 5 HOH E 130 454 454 HOH HOH . H 5 HOH E 131 455 455 HOH HOH . H 5 HOH E 132 456 456 HOH HOH . H 5 HOH E 133 457 457 HOH HOH . H 5 HOH E 134 458 458 HOH HOH . H 5 HOH E 135 459 459 HOH HOH . H 5 HOH E 136 460 460 HOH HOH . H 5 HOH E 137 461 461 HOH HOH . H 5 HOH E 138 462 462 HOH HOH . H 5 HOH E 139 463 463 HOH HOH . H 5 HOH E 140 464 464 HOH HOH . H 5 HOH E 141 465 465 HOH HOH . H 5 HOH E 142 466 466 HOH HOH . H 5 HOH E 143 467 467 HOH HOH . H 5 HOH E 144 468 468 HOH HOH . H 5 HOH E 145 469 469 HOH HOH . H 5 HOH E 146 470 470 HOH HOH . H 5 HOH E 147 471 471 HOH HOH . H 5 HOH E 148 472 472 HOH HOH . H 5 HOH E 149 473 473 HOH HOH . H 5 HOH E 150 474 474 HOH HOH . H 5 HOH E 151 475 475 HOH HOH . H 5 HOH E 152 476 476 HOH HOH . H 5 HOH E 153 477 477 HOH HOH . H 5 HOH E 154 478 478 HOH HOH . H 5 HOH E 155 479 479 HOH HOH . H 5 HOH E 156 480 480 HOH HOH . H 5 HOH E 157 481 481 HOH HOH . H 5 HOH E 158 482 482 HOH HOH . H 5 HOH E 159 483 483 HOH HOH . H 5 HOH E 160 484 484 HOH HOH . H 5 HOH E 161 485 485 HOH HOH . H 5 HOH E 162 486 486 HOH HOH . H 5 HOH E 163 487 487 HOH HOH . H 5 HOH E 164 488 488 HOH HOH . H 5 HOH E 165 489 489 HOH HOH . H 5 HOH E 166 490 490 HOH HOH . H 5 HOH E 167 491 491 HOH HOH . H 5 HOH E 168 492 492 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 41.925 _atom_site.Cartn_y 49.871 _atom_site.Cartn_z 4.853 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 11.55 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 317 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #