data_2TPI # _model_server_result.job_id MT9i8ABNnlpfitsmsKzzHQ _model_server_result.datetime_utc '2024-11-28 11:20:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2tpi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1}' # _entry.id 2TPI # _exptl.entry_id 2TPI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 200.59 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MERCURY (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2TPI _cell.length_a 75.67 _cell.length_b 84.16 _cell.length_c 122.89 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2TPI _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 13 Z CYS 22 1_555 A SG CYS 143 Z CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 31 Z CYS 42 1_555 A SG CYS 47 Z CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 A SG CYS 115 Z CYS 128 1_555 A SG CYS 216 Z CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf4 A SG CYS 122 Z CYS 136 1_555 A SG CYS 189 Z CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? disulf ? disulf5 A SG CYS 154 Z CYS 168 1_555 A SG CYS 168 Z CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf6 B SG CYS 5 I CYS 5 1_555 B SG CYS 55 I CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf7 B SG CYS 14 I CYS 14 1_555 B SG CYS 38 I CYS 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf8 B SG CYS 30 I CYS 30 1_555 B SG CYS 51 I CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? covale ? covale1 C C ILE . Z ILE 1016 1_555 D N VAL . Z VAL 1017 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 E HG HG . Z HG 1 1_555 A SG CYS 179 Z CYS 191 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.342 ? metalc ? metalc2 E HG HG . Z HG 1 1_555 A SG CYS 179 Z CYS 191 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.356 ? metalc ? metalc3 E HG HG . Z HG 1 1_555 A SG CYS 179 Z CYS 191 1_555 ? C ? ? C ? ? ? ? ? ? ? 2.306 ? metalc ? metalc4 E HG HG . Z HG 1 1_555 A SG CYS 203 Z CYS 220 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.308 ? metalc ? metalc5 E HG HG . Z HG 1 1_555 A SG CYS 203 Z CYS 220 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.297 ? metalc ? metalc6 E HG HG . Z HG 1 1_555 A SG CYS 203 Z CYS 220 1_555 ? C ? ? C ? ? ? ? ? ? ? 2.345 ? metalc ? metalc7 E HG HG . Z HG 1 1_555 F O HOH . Z HOH 596 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.59 ? # _chem_comp.formula 'Hg 2' _chem_comp.formula_weight 200.59 _chem_comp.id HG _chem_comp.mon_nstd_flag . _chem_comp.name 'MERCURY (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2TPI _atom_sites.fract_transf_matrix[1][1] 0.013215 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011882 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008137 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ILE Z 1 1016 1016 ILE ILE . D 4 VAL Z 1 1017 1017 VAL VAL . E 5 HG Z 1 1 1 HG HG . F 6 HOH Z 1 401 401 HOH HOH . F 6 HOH Z 2 402 402 HOH HOH . F 6 HOH Z 3 403 403 HOH HOH . F 6 HOH Z 4 405 405 HOH HOH . F 6 HOH Z 5 406 406 HOH HOH . F 6 HOH Z 6 407 407 HOH HOH . F 6 HOH Z 7 408 408 HOH HOH . F 6 HOH Z 8 409 409 HOH HOH . F 6 HOH Z 9 410 410 HOH HOH . F 6 HOH Z 10 411 411 HOH HOH . F 6 HOH Z 11 412 412 HOH HOH . F 6 HOH Z 12 414 414 HOH HOH . F 6 HOH Z 13 415 415 HOH HOH . F 6 HOH Z 14 425 425 HOH HOH . F 6 HOH Z 15 426 426 HOH HOH . F 6 HOH Z 16 429 429 HOH HOH . F 6 HOH Z 17 430 430 HOH HOH . F 6 HOH Z 18 431 431 HOH HOH . F 6 HOH Z 19 434 434 HOH HOH . F 6 HOH Z 20 435 435 HOH HOH . F 6 HOH Z 21 436 436 HOH HOH . F 6 HOH Z 22 437 437 HOH HOH . F 6 HOH Z 23 438 438 HOH HOH . F 6 HOH Z 24 439 439 HOH HOH . F 6 HOH Z 25 445 445 HOH HOH . F 6 HOH Z 26 447 447 HOH HOH . F 6 HOH Z 27 448 448 HOH HOH . F 6 HOH Z 28 456 456 HOH HOH . F 6 HOH Z 29 457 457 HOH HOH . F 6 HOH Z 30 462 462 HOH HOH . F 6 HOH Z 31 463 463 HOH HOH . F 6 HOH Z 32 465 465 HOH HOH . F 6 HOH Z 33 466 466 HOH HOH . F 6 HOH Z 34 469 469 HOH HOH . F 6 HOH Z 35 470 470 HOH HOH . F 6 HOH Z 36 473 473 HOH HOH . F 6 HOH Z 37 475 475 HOH HOH . F 6 HOH Z 38 476 476 HOH HOH . F 6 HOH Z 39 477 477 HOH HOH . F 6 HOH Z 40 479 479 HOH HOH . F 6 HOH Z 41 483 483 HOH HOH . F 6 HOH Z 42 487 487 HOH HOH . F 6 HOH Z 43 489 489 HOH HOH . F 6 HOH Z 44 491 491 HOH HOH . F 6 HOH Z 45 495 495 HOH HOH . F 6 HOH Z 46 498 498 HOH HOH . F 6 HOH Z 47 499 499 HOH HOH . F 6 HOH Z 48 502 502 HOH HOH . F 6 HOH Z 49 514 514 HOH HOH . F 6 HOH Z 50 516 516 HOH HOH . F 6 HOH Z 51 519 519 HOH HOH . F 6 HOH Z 52 520 520 HOH HOH . F 6 HOH Z 53 521 521 HOH HOH . F 6 HOH Z 54 522 522 HOH HOH . F 6 HOH Z 55 523 523 HOH HOH . F 6 HOH Z 56 524 524 HOH HOH . F 6 HOH Z 57 526 526 HOH HOH . F 6 HOH Z 58 527 527 HOH HOH . F 6 HOH Z 59 528 528 HOH HOH . F 6 HOH Z 60 529 529 HOH HOH . F 6 HOH Z 61 530 530 HOH HOH . F 6 HOH Z 62 531 531 HOH HOH . F 6 HOH Z 63 534 534 HOH HOH . F 6 HOH Z 64 540 540 HOH HOH . F 6 HOH Z 65 541 541 HOH HOH . F 6 HOH Z 66 542 542 HOH HOH . F 6 HOH Z 67 543 543 HOH HOH . F 6 HOH Z 68 544 544 HOH HOH . F 6 HOH Z 69 545 545 HOH HOH . F 6 HOH Z 70 547 547 HOH HOH . F 6 HOH Z 71 549 549 HOH HOH . F 6 HOH Z 72 550 550 HOH HOH . F 6 HOH Z 73 551 551 HOH HOH . F 6 HOH Z 74 552 552 HOH HOH . F 6 HOH Z 75 554 554 HOH HOH . F 6 HOH Z 76 555 555 HOH HOH . F 6 HOH Z 77 556 556 HOH HOH . F 6 HOH Z 78 559 559 HOH HOH . F 6 HOH Z 79 560 560 HOH HOH . F 6 HOH Z 80 561 561 HOH HOH . F 6 HOH Z 81 562 562 HOH HOH . F 6 HOH Z 82 563 563 HOH HOH . F 6 HOH Z 83 566 566 HOH HOH . F 6 HOH Z 84 570 570 HOH HOH . F 6 HOH Z 85 571 571 HOH HOH . F 6 HOH Z 86 573 573 HOH HOH . F 6 HOH Z 87 574 574 HOH HOH . F 6 HOH Z 88 575 575 HOH HOH . F 6 HOH Z 89 576 576 HOH HOH . F 6 HOH Z 90 577 577 HOH HOH . F 6 HOH Z 91 578 578 HOH HOH . F 6 HOH Z 92 583 583 HOH HOH . F 6 HOH Z 93 585 585 HOH HOH . F 6 HOH Z 94 586 586 HOH HOH . F 6 HOH Z 95 593 593 HOH HOH . F 6 HOH Z 96 594 594 HOH HOH . F 6 HOH Z 97 595 595 HOH HOH . F 6 HOH Z 98 596 596 HOH HOH . F 6 HOH Z 99 597 597 HOH HOH . F 6 HOH Z 100 599 599 HOH HOH . F 6 HOH Z 101 600 600 HOH HOH . F 6 HOH Z 102 601 601 HOH HOH . F 6 HOH Z 103 603 603 HOH HOH . F 6 HOH Z 104 604 604 HOH HOH . F 6 HOH Z 105 605 605 HOH HOH . G 6 HOH I 1 400 400 HOH HOH . G 6 HOH I 2 404 404 HOH HOH . G 6 HOH I 3 413 413 HOH HOH . G 6 HOH I 4 416 416 HOH HOH . G 6 HOH I 5 417 417 HOH HOH . G 6 HOH I 6 419 419 HOH HOH . G 6 HOH I 7 420 420 HOH HOH . G 6 HOH I 8 421 421 HOH HOH . G 6 HOH I 9 422 422 HOH HOH . G 6 HOH I 10 423 423 HOH HOH . G 6 HOH I 11 427 427 HOH HOH . G 6 HOH I 12 450 450 HOH HOH . G 6 HOH I 13 455 455 HOH HOH . G 6 HOH I 14 501 501 HOH HOH . G 6 HOH I 15 503 503 HOH HOH . G 6 HOH I 16 505 505 HOH HOH . G 6 HOH I 17 507 507 HOH HOH . G 6 HOH I 18 508 508 HOH HOH . G 6 HOH I 19 511 511 HOH HOH . G 6 HOH I 20 512 512 HOH HOH . G 6 HOH I 21 515 515 HOH HOH . G 6 HOH I 22 532 532 HOH HOH . G 6 HOH I 23 533 533 HOH HOH . G 6 HOH I 24 536 536 HOH HOH . G 6 HOH I 25 537 537 HOH HOH . G 6 HOH I 26 538 538 HOH HOH . G 6 HOH I 27 564 564 HOH HOH . G 6 HOH I 28 565 565 HOH HOH . G 6 HOH I 29 568 568 HOH HOH . G 6 HOH I 30 569 569 HOH HOH . G 6 HOH I 31 588 588 HOH HOH . G 6 HOH I 32 589 589 HOH HOH . G 6 HOH I 33 590 590 HOH HOH . G 6 HOH I 34 602 602 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 HG HG HG . A . E 5 22.491 72.205 13.408 0.33 85.2 ? HG HG 1 Z 1 HETATM 2 HG HG HG . B . E 5 23.299 70.646 13.629 0.33 49.2 ? HG HG 1 Z 1 HETATM 3 HG HG HG . C . E 5 22.554 69.084 13.763 0.33 83.1 ? HG HG 1 Z 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 3 #