data_2TRT # _model_server_result.job_id xMpDQFSUhJd0uUDMXUUniA _model_server_result.datetime_utc '2024-11-07 10:06:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2trt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":222}' # _entry.id 2TRT # _exptl.entry_id 2TRT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 444.435 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TETRACYCLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2TRT _cell.length_a 68.32 _cell.length_b 68.32 _cell.length_c 181.14 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2TRT _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 68.32 68.32 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 99 A HIS 100 1_555 B MG MG . A MG 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc2 C O11 TAC . A TAC 222 1_555 B MG MG . A MG 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc3 C O12 TAC . A TAC 222 1_555 B MG MG . A MG 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.838 ? metalc ? metalc4 B MG MG . A MG 223 1_555 D O HOH . A HOH 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc5 B MG MG . A MG 223 1_555 D O HOH . A HOH 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.668 ? metalc ? metalc6 B MG MG . A MG 223 1_555 D O HOH . A HOH 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.781 ? # _chem_comp.formula 'C22 H24 N2 O8' _chem_comp.formula_weight 444.435 _chem_comp.id TAC _chem_comp.mon_nstd_flag . _chem_comp.name TETRACYCLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 TAC doub 290 n n C1 C2 TAC sing 291 n n C1 C1C TAC sing 292 n n C2 C21 TAC sing 293 n n C2 C3 TAC doub 294 n n C21 O21 TAC doub 295 n n C21 N21 TAC sing 296 n n N21 HN21 TAC sing 297 n n N21 HN22 TAC sing 298 n n C3 O3 TAC sing 299 n n C3 C4 TAC sing 300 n n O3 HO3 TAC sing 301 n n C4 N4 TAC sing 302 n n C4 C41 TAC sing 303 n n C4 H4 TAC sing 304 n n N4 C42 TAC sing 305 n n N4 C43 TAC sing 306 n n C42 H421 TAC sing 307 n n C42 H422 TAC sing 308 n n C42 H423 TAC sing 309 n n C43 H431 TAC sing 310 n n C43 H432 TAC sing 311 n n C43 H433 TAC sing 312 n n C41 C5 TAC sing 313 n n C41 C1C TAC sing 314 n n C41 H41 TAC sing 315 n n C5 C51 TAC sing 316 n n C5 H51A TAC sing 317 n n C5 H52 TAC sing 318 n n C51 C6 TAC sing 319 n n C51 C1B TAC sing 320 n n C51 H51 TAC sing 321 n n C6 C62 TAC sing 322 n n C6 O6 TAC sing 323 n n C6 C61 TAC sing 324 n n C62 H621 TAC sing 325 n n C62 H622 TAC sing 326 n n C62 H623 TAC sing 327 n n O6 HO6 TAC sing 328 n n C61 C7 TAC doub 329 n y C61 C1A TAC sing 330 n y C7 C8 TAC sing 331 n y C7 H7 TAC sing 332 n n C8 C9 TAC doub 333 n y C8 H8 TAC sing 334 n n C9 C10 TAC sing 335 n y C9 H9 TAC sing 336 n n C10 O10 TAC sing 337 n n C10 C1A TAC doub 338 n y O10 HO1 TAC sing 339 n n C1A C11 TAC sing 340 n n C11 O11 TAC doub 341 n n C11 C1B TAC sing 342 n n C1B C12 TAC doub 343 n n C12 O12 TAC sing 344 n n C12 C1C TAC sing 345 n n O12 HO2 TAC sing 346 n n C1C O1C TAC sing 347 n n O1C HOC TAC sing 348 n n # _atom_sites.entry_id 2TRT _atom_sites.fract_transf_matrix[1][1] 0.014637 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014637 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005521 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 223 223 MG MG . C 3 TAC A 1 222 222 TAC TAC . D 4 HOH A 1 224 224 HOH HOH . D 4 HOH A 2 225 225 HOH HOH . D 4 HOH A 3 226 226 HOH HOH . D 4 HOH A 4 227 227 HOH HOH . D 4 HOH A 5 228 228 HOH HOH . D 4 HOH A 6 229 229 HOH HOH . D 4 HOH A 7 230 230 HOH HOH . D 4 HOH A 8 231 231 HOH HOH . D 4 HOH A 9 232 232 HOH HOH . D 4 HOH A 10 233 233 HOH HOH . D 4 HOH A 11 234 234 HOH HOH . D 4 HOH A 12 235 235 HOH HOH . D 4 HOH A 13 236 236 HOH HOH . D 4 HOH A 14 237 237 HOH HOH . D 4 HOH A 15 238 238 HOH HOH . D 4 HOH A 16 239 239 HOH HOH . D 4 HOH A 17 240 240 HOH HOH . D 4 HOH A 18 241 241 HOH HOH . D 4 HOH A 19 242 242 HOH HOH . D 4 HOH A 20 243 243 HOH HOH . D 4 HOH A 21 244 244 HOH HOH . D 4 HOH A 22 245 245 HOH HOH . D 4 HOH A 23 246 246 HOH HOH . D 4 HOH A 24 247 247 HOH HOH . D 4 HOH A 25 248 248 HOH HOH . D 4 HOH A 26 249 249 HOH HOH . D 4 HOH A 27 250 250 HOH HOH . D 4 HOH A 28 251 251 HOH HOH . D 4 HOH A 29 252 252 HOH HOH . D 4 HOH A 30 253 253 HOH HOH . D 4 HOH A 31 254 254 HOH HOH . D 4 HOH A 32 255 255 HOH HOH . D 4 HOH A 33 256 256 HOH HOH . D 4 HOH A 34 257 257 HOH HOH . D 4 HOH A 35 258 258 HOH HOH . D 4 HOH A 36 259 259 HOH HOH . D 4 HOH A 37 260 260 HOH HOH . D 4 HOH A 38 261 261 HOH HOH . D 4 HOH A 39 262 262 HOH HOH . D 4 HOH A 40 263 263 HOH HOH . D 4 HOH A 41 264 264 HOH HOH . D 4 HOH A 42 265 265 HOH HOH . D 4 HOH A 43 266 266 HOH HOH . D 4 HOH A 44 267 267 HOH HOH . D 4 HOH A 45 268 268 HOH HOH . D 4 HOH A 46 269 269 HOH HOH . D 4 HOH A 47 270 270 HOH HOH . D 4 HOH A 48 271 271 HOH HOH . D 4 HOH A 49 272 272 HOH HOH . D 4 HOH A 50 273 273 HOH HOH . D 4 HOH A 51 274 274 HOH HOH . D 4 HOH A 52 275 275 HOH HOH . D 4 HOH A 53 276 276 HOH HOH . D 4 HOH A 54 277 277 HOH HOH . D 4 HOH A 55 278 278 HOH HOH . D 4 HOH A 56 279 279 HOH HOH . D 4 HOH A 57 280 280 HOH HOH . D 4 HOH A 58 281 281 HOH HOH . D 4 HOH A 59 282 282 HOH HOH . D 4 HOH A 60 283 283 HOH HOH . D 4 HOH A 61 284 284 HOH HOH . D 4 HOH A 62 285 285 HOH HOH . D 4 HOH A 63 286 286 HOH HOH . D 4 HOH A 64 287 287 HOH HOH . D 4 HOH A 65 288 288 HOH HOH . D 4 HOH A 66 289 289 HOH HOH . D 4 HOH A 67 290 290 HOH HOH . D 4 HOH A 68 291 291 HOH HOH . D 4 HOH A 69 292 292 HOH HOH . D 4 HOH A 70 293 293 HOH HOH . D 4 HOH A 71 294 294 HOH HOH . D 4 HOH A 72 295 295 HOH HOH . D 4 HOH A 73 296 296 HOH HOH . D 4 HOH A 74 297 297 HOH HOH . D 4 HOH A 75 298 298 HOH HOH . D 4 HOH A 76 299 299 HOH HOH . D 4 HOH A 77 300 300 HOH HOH . D 4 HOH A 78 301 301 HOH HOH . D 4 HOH A 79 302 302 HOH HOH . D 4 HOH A 80 303 303 HOH HOH . D 4 HOH A 81 304 304 HOH HOH . D 4 HOH A 82 305 305 HOH HOH . D 4 HOH A 83 306 306 HOH HOH . D 4 HOH A 84 307 307 HOH HOH . D 4 HOH A 85 308 308 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TAC . . . C 3 19.61 34.121 34.372 1 21.46 ? C1 TAC 222 A 1 HETATM 2 O O1 TAC . . . C 3 19.077 34.444 33.289 1 32.56 ? O1 TAC 222 A 1 HETATM 3 C C2 TAC . . . C 3 19.13 33.015 35.144 1 21.88 ? C2 TAC 222 A 1 HETATM 4 C C21 TAC . . . C 3 18.027 32.231 34.74 1 25.06 ? C21 TAC 222 A 1 HETATM 5 O O21 TAC . . . C 3 17.794 31.108 35.28 1 24.36 ? O21 TAC 222 A 1 HETATM 6 N N21 TAC . . . C 3 17.216 32.601 33.694 1 23.56 ? N21 TAC 222 A 1 HETATM 7 C C3 TAC . . . C 3 19.912 32.601 36.224 1 12.47 ? C3 TAC 222 A 1 HETATM 8 O O3 TAC . . . C 3 19.877 31.291 36.646 1 12.11 ? O3 TAC 222 A 1 HETATM 9 C C4 TAC . . . C 3 21.048 33.404 36.693 1 11.23 ? C4 TAC 222 A 1 HETATM 10 N N4 TAC . . . C 3 21.918 32.68 37.671 1 11.36 ? N4 TAC 222 A 1 HETATM 11 C C42 TAC . . . C 3 22.763 33.612 38.526 1 15.98 ? C42 TAC 222 A 1 HETATM 12 C C43 TAC . . . C 3 22.893 31.871 36.835 1 16.8 ? C43 TAC 222 A 1 HETATM 13 C C41 TAC . . . C 3 21.414 34.733 36.06 1 20.74 ? C41 TAC 222 A 1 HETATM 14 C C5 TAC . . . C 3 20.421 35.869 36.469 1 19.36 ? C5 TAC 222 A 1 HETATM 15 C C51 TAC . . . C 3 20.828 37.175 35.81 1 19.94 ? C51 TAC 222 A 1 HETATM 16 C C6 TAC . . . C 3 19.916 38.382 36.01 1 24.33 ? C6 TAC 222 A 1 HETATM 17 C C62 TAC . . . C 3 19.582 38.717 37.446 1 26.9 ? C62 TAC 222 A 1 HETATM 18 O O6 TAC . . . C 3 18.691 38.027 35.339 1 26.9 ? O6 TAC 222 A 1 HETATM 19 C C61 TAC . . . C 3 20.509 39.63 35.336 1 24.48 ? C61 TAC 222 A 1 HETATM 20 C C7 TAC . . . C 3 20.1 40.902 35.733 1 26.58 ? C7 TAC 222 A 1 HETATM 21 C C8 TAC . . . C 3 20.616 42.046 35.111 1 22.73 ? C8 TAC 222 A 1 HETATM 22 C C9 TAC . . . C 3 21.486 41.935 34.067 1 22.35 ? C9 TAC 222 A 1 HETATM 23 C C10 TAC . . . C 3 21.857 40.673 33.595 1 24.13 ? C10 TAC 222 A 1 HETATM 24 O O10 TAC . . . C 3 22.754 40.616 32.456 1 24.63 ? O10 TAC 222 A 1 HETATM 25 C C1A TAC . . . C 3 21.375 39.499 34.229 1 25.19 ? C1A TAC 222 A 1 HETATM 26 C C11 TAC . . . C 3 21.652 38.216 33.698 1 22.65 ? C11 TAC 222 A 1 HETATM 27 O O11 TAC . . . C 3 22.346 38.119 32.669 1 14.21 ? O11 TAC 222 A 1 HETATM 28 C C1B TAC . . . C 3 21.298 37.05 34.359 1 21.9 ? C1B TAC 222 A 1 HETATM 29 C C12 TAC . . . C 3 21.585 35.785 33.864 1 18.86 ? C12 TAC 222 A 1 HETATM 30 O O12 TAC . . . C 3 22.289 35.615 32.654 1 16.76 ? O12 TAC 222 A 1 HETATM 31 C C1C TAC . . . C 3 21.097 34.507 34.537 1 21 ? C1C TAC 222 A 1 HETATM 32 O O1C TAC . . . C 3 21.893 33.427 34.044 1 20.37 ? O1C TAC 222 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #