data_2UVM # _model_server_result.job_id aFcIos9LrDpPZYDIJVaL7w _model_server_result.datetime_utc '2025-02-05 04:54:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2uvm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1116}' # _entry.id 2UVM # _exptl.entry_id 2UVM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 462.029 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BENZENE-1,2,3,4-TETRAYL TETRAKIS[DIHYDROGEN (PHOSPHATE)]' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.25 _cell.angle_gamma 90 _cell.entry_id 2UVM _cell.length_a 80.029 _cell.length_b 34.04 _cell.length_c 44.944 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2UVM _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OAU GVF . A GVF 1116 1_555 C NA NA . A NA 1117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc2 B OAV GVF . A GVF 1116 1_555 C NA NA . A NA 1117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? # _chem_comp.formula 'C6 H10 O16 P4' _chem_comp.formula_weight 462.029 _chem_comp.id GVF _chem_comp.mon_nstd_flag . _chem_comp.name 'BENZENE-1,2,3,4-TETRAYL TETRAKIS[DIHYDROGEN (PHOSPHATE)]' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAE PAH GVF sing 129 n n PAH OAG GVF sing 130 n n PAH OAI GVF doub 131 n n PAH OAM GVF sing 132 n n OAM CAL GVF sing 133 n n CAL CAP GVF sing 134 n n CAP OAQ GVF sing 135 n n OAQ PAT GVF sing 136 n n PAT OAS GVF sing 137 n n PAT OAY GVF sing 138 n n PAT OAU GVF doub 139 n n CAP CAO GVF doub 140 n n CAO OAR GVF sing 141 n n OAR PAW GVF sing 142 n n PAW OAV GVF sing 143 n n PAW OAZ GVF sing 144 n n PAW OAX GVF doub 145 n n CAO CAN GVF sing 146 n n CAN CAJ GVF doub 147 n n CAL CAK GVF doub 148 n n CAJ CAK GVF sing 149 n n CAK OAF GVF sing 150 n n OAF PAC GVF sing 151 n n PAC OAB GVF sing 152 n n PAC OAA GVF sing 153 n n PAC OAD GVF doub 154 n n OAE HAE GVF sing 155 n n OAG HAG GVF sing 156 n n OAS HAS GVF sing 157 n n OAY HAY GVF sing 158 n n CAN HAN GVF sing 159 n n OAV HAV GVF sing 160 n n OAZ HAZ GVF sing 161 n n CAJ HAJ GVF sing 162 n n OAB HAB GVF sing 163 n n OAA HAA GVF sing 164 n n # _atom_sites.entry_id 2UVM _atom_sites.fract_transf_matrix[1][1] 0.012495 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005112 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029377 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GVF A 1 1116 1116 GVF GVF . C 3 NA A 1 1117 1117 NA NA . D 4 HOH A 1 2001 2001 HOH HOH . D 4 HOH A 2 2002 2002 HOH HOH . D 4 HOH A 3 2003 2003 HOH HOH . D 4 HOH A 4 2004 2004 HOH HOH . D 4 HOH A 5 2005 2005 HOH HOH . D 4 HOH A 6 2006 2006 HOH HOH . D 4 HOH A 7 2007 2007 HOH HOH . D 4 HOH A 8 2008 2008 HOH HOH . D 4 HOH A 9 2009 2009 HOH HOH . D 4 HOH A 10 2010 2010 HOH HOH . D 4 HOH A 11 2011 2011 HOH HOH . D 4 HOH A 12 2012 2012 HOH HOH . D 4 HOH A 13 2013 2013 HOH HOH . D 4 HOH A 14 2014 2014 HOH HOH . D 4 HOH A 15 2015 2015 HOH HOH . D 4 HOH A 16 2016 2016 HOH HOH . D 4 HOH A 17 2017 2017 HOH HOH . D 4 HOH A 18 2018 2018 HOH HOH . D 4 HOH A 19 2019 2019 HOH HOH . D 4 HOH A 20 2020 2020 HOH HOH . D 4 HOH A 21 2021 2021 HOH HOH . D 4 HOH A 22 2022 2022 HOH HOH . D 4 HOH A 23 2023 2023 HOH HOH . D 4 HOH A 24 2024 2024 HOH HOH . D 4 HOH A 25 2025 2025 HOH HOH . D 4 HOH A 26 2026 2026 HOH HOH . D 4 HOH A 27 2027 2027 HOH HOH . D 4 HOH A 28 2028 2028 HOH HOH . D 4 HOH A 29 2029 2029 HOH HOH . D 4 HOH A 30 2030 2030 HOH HOH . D 4 HOH A 31 2031 2031 HOH HOH . D 4 HOH A 32 2032 2032 HOH HOH . D 4 HOH A 33 2033 2033 HOH HOH . D 4 HOH A 34 2034 2034 HOH HOH . D 4 HOH A 35 2035 2035 HOH HOH . D 4 HOH A 36 2036 2036 HOH HOH . D 4 HOH A 37 2037 2037 HOH HOH . D 4 HOH A 38 2038 2038 HOH HOH . D 4 HOH A 39 2039 2039 HOH HOH . D 4 HOH A 40 2040 2040 HOH HOH . D 4 HOH A 41 2041 2041 HOH HOH . D 4 HOH A 42 2042 2042 HOH HOH . D 4 HOH A 43 2043 2043 HOH HOH . D 4 HOH A 44 2044 2044 HOH HOH . D 4 HOH A 45 2045 2045 HOH HOH . D 4 HOH A 46 2046 2046 HOH HOH . D 4 HOH A 47 2047 2047 HOH HOH . D 4 HOH A 48 2048 2048 HOH HOH . D 4 HOH A 49 2049 2049 HOH HOH . D 4 HOH A 50 2050 2050 HOH HOH . D 4 HOH A 51 2051 2051 HOH HOH . D 4 HOH A 52 2052 2052 HOH HOH . D 4 HOH A 53 2053 2053 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAE GVF . . . B 2 12.566 7.794 13.192 1 19.72 ? OAE GVF 1116 A 1 HETATM 2 P PAH GVF . . . B 2 12.703 8.478 14.641 1 19.14 ? PAH GVF 1116 A 1 HETATM 3 O OAG GVF . . . B 2 13.858 7.646 15.393 1 18.2 ? OAG GVF 1116 A 1 HETATM 4 O OAI GVF . . . B 2 11.417 8.432 15.371 1 21.46 ? OAI GVF 1116 A 1 HETATM 5 O OAM GVF . . . B 2 13.212 9.985 14.378 1 20.46 ? OAM GVF 1116 A 1 HETATM 6 C CAL GVF . . . B 2 14.258 10.406 15.14 1 20.74 ? CAL GVF 1116 A 1 HETATM 7 C CAP GVF . . . B 2 14.083 10.899 16.435 1 20.19 ? CAP GVF 1116 A 1 HETATM 8 O OAQ GVF . . . B 2 12.935 10.66 17.129 1 21.98 ? OAQ GVF 1116 A 1 HETATM 9 P PAT GVF . . . B 2 11.673 11.558 16.682 1 24.77 ? PAT GVF 1116 A 1 HETATM 10 O OAS GVF . . . B 2 12.149 12.58 15.533 1 26.37 ? OAS GVF 1116 A 1 HETATM 11 O OAY GVF . . . B 2 10.66 10.506 16.003 1 27.6 ? OAY GVF 1116 A 1 HETATM 12 O OAU GVF . . . B 2 11.024 12.243 17.82 1 25.19 ? OAU GVF 1116 A 1 HETATM 13 C CAO GVF . . . B 2 15.132 11.551 17.078 1 20.78 ? CAO GVF 1116 A 1 HETATM 14 O OAR GVF . . . B 2 14.906 12.256 18.223 1 20.31 ? OAR GVF 1116 A 1 HETATM 15 P PAW GVF . . . B 2 14.785 11.402 19.585 1 20.1 ? PAW GVF 1116 A 1 HETATM 16 O OAV GVF . . . B 2 13.223 11.256 19.935 1 20.21 ? OAV GVF 1116 A 1 HETATM 17 O OAZ GVF . . . B 2 15.302 9.911 19.267 1 20.17 ? OAZ GVF 1116 A 1 HETATM 18 O OAX GVF . . . B 2 15.517 12.056 20.692 1 20.13 ? OAX GVF 1116 A 1 HETATM 19 C CAN GVF . . . B 2 16.364 11.671 16.443 1 20.18 ? CAN GVF 1116 A 1 HETATM 20 C CAJ GVF . . . B 2 16.552 11.162 15.158 1 19.58 ? CAJ GVF 1116 A 1 HETATM 21 C CAK GVF . . . B 2 15.494 10.534 14.51 1 20.44 ? CAK GVF 1116 A 1 HETATM 22 O OAF GVF . . . B 2 15.553 10.093 13.224 1 20.57 ? OAF GVF 1116 A 1 HETATM 23 P PAC GVF . . . B 2 16.993 9.709 12.614 1 20.28 ? PAC GVF 1116 A 1 HETATM 24 O OAB GVF . . . B 2 17.856 11.064 12.519 1 19.47 ? OAB GVF 1116 A 1 HETATM 25 O OAA GVF . . . B 2 16.635 9.252 11.114 1 21.81 ? OAA GVF 1116 A 1 HETATM 26 O OAD GVF . . . B 2 17.685 8.635 13.359 1 18.32 ? OAD GVF 1116 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #