data_2UWJ # _model_server_result.job_id 529wg-xWfZLuv-X2taTwMg _model_server_result.datetime_utc '2024-11-22 17:55:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2uwj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1071}' # _entry.id 2UWJ # _exptl.entry_id 2UWJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.693 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICKEL (II) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2UWJ _cell.length_a 85.305 _cell.length_b 85.305 _cell.length_c 157.553 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2UWJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 x,x-y,-z+1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 52.517667 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B N MET 1 F MET 54 1_555 F NI NI . F NI 1086 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.913 ? metalc ? metalc2 B N HIS 2 F HIS 55 1_555 F NI NI . F NI 1086 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc3 B ND1 HIS 2 F HIS 55 1_555 F NI NI . F NI 1086 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc4 F NI NI . F NI 1086 1_555 C ND1 HIS 80 G HIS 80 4_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? # _chem_comp.formula 'Ni 2' _chem_comp.formula_weight 58.693 _chem_comp.id NI _chem_comp.mon_nstd_flag . _chem_comp.name 'NICKEL (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2UWJ _atom_sites.fract_transf_matrix[1][1] 0.011723 _atom_sites.fract_transf_matrix[1][2] 0.006768 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013536 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006347 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NI E 1 1071 1071 NI NI . E 4 NI E 1 1072 1072 NI NI . F 4 NI F 1 1086 1086 NI NI . G 5 HOH E 1 2001 2001 HOH HOH . G 5 HOH E 2 2002 2002 HOH HOH . G 5 HOH E 3 2003 2003 HOH HOH . G 5 HOH E 4 2004 2004 HOH HOH . G 5 HOH E 5 2005 2005 HOH HOH . G 5 HOH E 6 2006 2006 HOH HOH . G 5 HOH E 7 2007 2007 HOH HOH . G 5 HOH E 8 2008 2008 HOH HOH . G 5 HOH E 9 2009 2009 HOH HOH . G 5 HOH E 10 2010 2010 HOH HOH . G 5 HOH E 11 2011 2011 HOH HOH . G 5 HOH E 12 2012 2012 HOH HOH . G 5 HOH E 13 2013 2013 HOH HOH . G 5 HOH E 14 2014 2014 HOH HOH . G 5 HOH E 15 2015 2015 HOH HOH . G 5 HOH E 16 2016 2016 HOH HOH . G 5 HOH E 17 2017 2017 HOH HOH . G 5 HOH E 18 2018 2018 HOH HOH . G 5 HOH E 19 2019 2019 HOH HOH . G 5 HOH E 20 2020 2020 HOH HOH . G 5 HOH E 21 2021 2021 HOH HOH . G 5 HOH E 22 2022 2022 HOH HOH . G 5 HOH E 23 2023 2023 HOH HOH . G 5 HOH E 24 2024 2024 HOH HOH . G 5 HOH E 25 2025 2025 HOH HOH . G 5 HOH E 26 2026 2026 HOH HOH . G 5 HOH E 27 2027 2027 HOH HOH . G 5 HOH E 28 2028 2028 HOH HOH . G 5 HOH E 29 2029 2029 HOH HOH . G 5 HOH E 30 2030 2030 HOH HOH . G 5 HOH E 31 2031 2031 HOH HOH . G 5 HOH E 32 2032 2032 HOH HOH . G 5 HOH E 33 2033 2033 HOH HOH . G 5 HOH E 34 2034 2034 HOH HOH . G 5 HOH E 35 2035 2035 HOH HOH . G 5 HOH E 36 2036 2036 HOH HOH . H 5 HOH F 1 2001 2001 HOH HOH . H 5 HOH F 2 2002 2002 HOH HOH . H 5 HOH F 3 2003 2003 HOH HOH . H 5 HOH F 4 2004 2004 HOH HOH . H 5 HOH F 5 2005 2005 HOH HOH . H 5 HOH F 6 2006 2006 HOH HOH . H 5 HOH F 7 2007 2007 HOH HOH . H 5 HOH F 8 2008 2008 HOH HOH . H 5 HOH F 9 2009 2009 HOH HOH . H 5 HOH F 10 2010 2010 HOH HOH . H 5 HOH F 11 2011 2011 HOH HOH . H 5 HOH F 12 2012 2012 HOH HOH . H 5 HOH F 13 2013 2013 HOH HOH . H 5 HOH F 14 2014 2014 HOH HOH . H 5 HOH F 15 2015 2015 HOH HOH . H 5 HOH F 16 2016 2016 HOH HOH . H 5 HOH F 17 2017 2017 HOH HOH . H 5 HOH F 18 2018 2018 HOH HOH . H 5 HOH F 19 2019 2019 HOH HOH . H 5 HOH F 20 2020 2020 HOH HOH . H 5 HOH F 21 2021 2021 HOH HOH . H 5 HOH F 22 2022 2022 HOH HOH . H 5 HOH F 23 2023 2023 HOH HOH . H 5 HOH F 24 2024 2024 HOH HOH . H 5 HOH F 25 2025 2025 HOH HOH . H 5 HOH F 26 2026 2026 HOH HOH . H 5 HOH F 27 2027 2027 HOH HOH . H 5 HOH F 28 2028 2028 HOH HOH . H 5 HOH F 29 2029 2029 HOH HOH . H 5 HOH F 30 2030 2030 HOH HOH . H 5 HOH F 31 2031 2031 HOH HOH . H 5 HOH F 32 2032 2032 HOH HOH . H 5 HOH F 33 2033 2033 HOH HOH . H 5 HOH F 34 2034 2034 HOH HOH . H 5 HOH F 35 2035 2035 HOH HOH . H 5 HOH F 36 2036 2036 HOH HOH . H 5 HOH F 37 2037 2037 HOH HOH . H 5 HOH F 38 2038 2038 HOH HOH . I 5 HOH G 1 2001 2001 HOH HOH . I 5 HOH G 2 2002 2002 HOH HOH . I 5 HOH G 3 2003 2003 HOH HOH . I 5 HOH G 4 2004 2004 HOH HOH . I 5 HOH G 5 2005 2005 HOH HOH . I 5 HOH G 6 2006 2006 HOH HOH . I 5 HOH G 7 2007 2007 HOH HOH . I 5 HOH G 8 2008 2008 HOH HOH . I 5 HOH G 9 2009 2009 HOH HOH . I 5 HOH G 10 2010 2010 HOH HOH . I 5 HOH G 11 2011 2011 HOH HOH . I 5 HOH G 12 2012 2012 HOH HOH . I 5 HOH G 13 2013 2013 HOH HOH . I 5 HOH G 14 2014 2014 HOH HOH . I 5 HOH G 15 2015 2015 HOH HOH . I 5 HOH G 16 2016 2016 HOH HOH . I 5 HOH G 17 2017 2017 HOH HOH . I 5 HOH G 18 2018 2018 HOH HOH . I 5 HOH G 19 2019 2019 HOH HOH . I 5 HOH G 20 2020 2020 HOH HOH . I 5 HOH G 21 2021 2021 HOH HOH . I 5 HOH G 22 2022 2022 HOH HOH . I 5 HOH G 23 2023 2023 HOH HOH . I 5 HOH G 24 2024 2024 HOH HOH . I 5 HOH G 25 2025 2025 HOH HOH . I 5 HOH G 26 2026 2026 HOH HOH . I 5 HOH G 27 2027 2027 HOH HOH . I 5 HOH G 28 2028 2028 HOH HOH . I 5 HOH G 29 2029 2029 HOH HOH . I 5 HOH G 30 2030 2030 HOH HOH . I 5 HOH G 31 2031 2031 HOH HOH . I 5 HOH G 32 2032 2032 HOH HOH . I 5 HOH G 33 2033 2033 HOH HOH . I 5 HOH G 34 2034 2034 HOH HOH . I 5 HOH G 35 2035 2035 HOH HOH . I 5 HOH G 36 2036 2036 HOH HOH . I 5 HOH G 37 2037 2037 HOH HOH . I 5 HOH G 38 2038 2038 HOH HOH . I 5 HOH G 39 2039 2039 HOH HOH . I 5 HOH G 40 2040 2040 HOH HOH . I 5 HOH G 41 2041 2041 HOH HOH . I 5 HOH G 42 2042 2042 HOH HOH . I 5 HOH G 43 2043 2043 HOH HOH . I 5 HOH G 44 2044 2044 HOH HOH . I 5 HOH G 45 2045 2045 HOH HOH . I 5 HOH G 46 2046 2046 HOH HOH . I 5 HOH G 47 2047 2047 HOH HOH . I 5 HOH G 48 2048 2048 HOH HOH . I 5 HOH G 49 2049 2049 HOH HOH . I 5 HOH G 50 2050 2050 HOH HOH . I 5 HOH G 51 2051 2051 HOH HOH . I 5 HOH G 52 2052 2052 HOH HOH . I 5 HOH G 53 2053 2053 HOH HOH . I 5 HOH G 54 2054 2054 HOH HOH . I 5 HOH G 55 2055 2055 HOH HOH . I 5 HOH G 56 2056 2056 HOH HOH . I 5 HOH G 57 2057 2057 HOH HOH . I 5 HOH G 58 2058 2058 HOH HOH . I 5 HOH G 59 2059 2059 HOH HOH . I 5 HOH G 60 2060 2060 HOH HOH . I 5 HOH G 61 2061 2061 HOH HOH . I 5 HOH G 62 2062 2062 HOH HOH . I 5 HOH G 63 2063 2063 HOH HOH . I 5 HOH G 64 2064 2064 HOH HOH . I 5 HOH G 65 2065 2065 HOH HOH . I 5 HOH G 66 2066 2066 HOH HOH . I 5 HOH G 67 2067 2067 HOH HOH . I 5 HOH G 68 2068 2068 HOH HOH . I 5 HOH G 69 2069 2069 HOH HOH . I 5 HOH G 70 2070 2070 HOH HOH . I 5 HOH G 71 2071 2071 HOH HOH . I 5 HOH G 72 2072 2072 HOH HOH . I 5 HOH G 73 2073 2073 HOH HOH . I 5 HOH G 74 2074 2074 HOH HOH . I 5 HOH G 75 2075 2075 HOH HOH . I 5 HOH G 76 2076 2076 HOH HOH . I 5 HOH G 77 2077 2077 HOH HOH . I 5 HOH G 78 2078 2078 HOH HOH . I 5 HOH G 79 2079 2079 HOH HOH . I 5 HOH G 80 2080 2080 HOH HOH . I 5 HOH G 81 2081 2081 HOH HOH . I 5 HOH G 82 2082 2082 HOH HOH . I 5 HOH G 83 2083 2083 HOH HOH . I 5 HOH G 84 2084 2084 HOH HOH . I 5 HOH G 85 2085 2085 HOH HOH . I 5 HOH G 86 2086 2086 HOH HOH . I 5 HOH G 87 2087 2087 HOH HOH . I 5 HOH G 88 2088 2088 HOH HOH . I 5 HOH G 89 2089 2089 HOH HOH . I 5 HOH G 90 2090 2090 HOH HOH . I 5 HOH G 91 2091 2091 HOH HOH . I 5 HOH G 92 2092 2092 HOH HOH . I 5 HOH G 93 2093 2093 HOH HOH . I 5 HOH G 94 2094 2094 HOH HOH . I 5 HOH G 95 2095 2095 HOH HOH . I 5 HOH G 96 2096 2096 HOH HOH . I 5 HOH G 97 2097 2097 HOH HOH . I 5 HOH G 98 2098 2098 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NI _atom_site.label_atom_id NI _atom_site.label_comp_id NI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 54.321 _atom_site.Cartn_y 48.906 _atom_site.Cartn_z 7.73 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 109.89 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NI _atom_site.auth_comp_id NI _atom_site.auth_seq_id 1071 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #