data_2V0M
#
_model_server_result.job_id            0Nb2kCP5JUJ9fOssZKrq0g 
_model_server_result.datetime_utc      '2024-11-25 07:21:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2v0m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":1499}' 
#
_entry.id    2V0M 
#
_exptl.entry_id    2V0M 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              531.431 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-ACETYL-4-(4-{[(2S,4R)-2-(2,4-DICHLOROPHENYL)-2-(1H-IMIDAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL]METHOXY}PHENYL)PIPERAZINE 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.8 
_cell.angle_gamma         90 
_cell.entry_id            2V0M 
_cell.length_a            228.942 
_cell.length_b            66.363 
_cell.length_c            146.419 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2V0M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS monomeric 1 author_and_software_defined_assembly 1 
PQS monomeric 1 author_and_software_defined_assembly 2 
PQS monomeric 1 author_and_software_defined_assembly 3 
PQS monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G 1 1 
B,H,I,J 2 1 
C,K,L,M 3 1 
D,N,O,P 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 I N N 
? 3 J N N 
? 3 L N N 
? 3 M N N 
? 3 O N N 
? 3 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 420 A CYS 442 1_555 E FE HEM . A HEM 1499 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc2 E FE HEM . A HEM 1499 1_555 F N2 KLN . A KLN 1500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
metalc ? metalc3 B SG CYS 420 B CYS 442 1_555 H FE HEM . B HEM 1497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? 
metalc ? metalc4 H FE HEM . B HEM 1497 1_555 I N2 KLN . B KLN 1498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
metalc ? metalc5 C SG CYS 420 C CYS 442 1_555 K FE HEM . C HEM 1497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
metalc ? metalc6 K FE HEM . C HEM 1497 1_555 L N2 KLN . C KLN 1498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc7 D SG CYS 420 D CYS 442 1_555 N FE HEM . D HEM 1497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? 
metalc ? metalc8 N FE HEM . D HEM 1497 1_555 O N2 KLN . D KLN 1498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? 
#
_chem_comp.formula           'C26 H28 Cl2 N4 O4' 
_chem_comp.formula_weight    531.431 
_chem_comp.id                KLN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-ACETYL-4-(4-{[(2S,4R)-2-(2,4-DICHLOROPHENYL)-2-(1H-IMIDAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL]METHOXY}PHENYL)PIPERAZINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C1 KLN sing 253 n y 
C1 N2 KLN doub 254 n y 
N2 C2 KLN sing 255 n y 
N1 C3 KLN sing 256 n y 
C2 C3 KLN doub 257 n y 
N1 C4 KLN sing 258 n n 
C4 C5 KLN sing 259 n n 
C5 O1 KLN sing 260 n n 
O1 C6 KLN sing 261 n n 
C6 C7 KLN sing 262 n n 
C5 O2 KLN sing 263 n n 
C7 O2 KLN sing 264 n n 
C5 C8 KLN sing 265 n n 
C8 C9 KLN sing 266 n y 
C9 C10 KLN doub 267 n y 
C10 C11 KLN sing 268 n y 
C11 C12 KLN doub 269 n y 
C8 C13 KLN doub 270 n y 
C12 C13 KLN sing 271 n y 
C11 CL1 KLN sing 272 n n 
C6 C14 KLN sing 273 n n 
C14 O3 KLN sing 274 n n 
O3 C15 KLN sing 275 n n 
C15 C16 KLN doub 276 n y 
C17 C16 KLN sing 277 n y 
C18 C17 KLN doub 278 n y 
C19 C18 KLN sing 279 n y 
C20 C19 KLN doub 280 n y 
C15 C20 KLN sing 281 n y 
C18 N3 KLN sing 282 n n 
N3 C21 KLN sing 283 n n 
C21 C22 KLN sing 284 n n 
C22 N4 KLN sing 285 n n 
N4 C23 KLN sing 286 n n 
N3 C24 KLN sing 287 n n 
C23 C24 KLN sing 288 n n 
N4 C25 KLN sing 289 n n 
C25 O4 KLN doub 290 n n 
C25 C26 KLN sing 291 n n 
C9 CL2 KLN sing 292 n n 
C1 H1 KLN sing 293 n n 
C3 H3 KLN sing 294 n n 
C4 H4C1 KLN sing 295 n n 
C4 H4C2 KLN sing 296 n n 
C2 H2 KLN sing 297 n n 
C6 H6 KLN sing 298 n n 
C7 H7C1 KLN sing 299 n n 
C7 H7C2 KLN sing 300 n n 
C14 H141 KLN sing 301 n n 
C14 H142 KLN sing 302 n n 
C13 H13 KLN sing 303 n n 
C10 H10 KLN sing 304 n n 
C12 H12 KLN sing 305 n n 
C20 H20 KLN sing 306 n n 
C16 H16 KLN sing 307 n n 
C19 H19 KLN sing 308 n n 
C17 H17 KLN sing 309 n n 
C21 H211 KLN sing 310 n n 
C21 H212 KLN sing 311 n n 
C24 H241 KLN sing 312 n n 
C24 H242 KLN sing 313 n n 
C22 H221 KLN sing 314 n n 
C22 H222 KLN sing 315 n n 
C23 H231 KLN sing 316 n n 
C23 H232 KLN sing 317 n n 
C26 H261 KLN sing 318 n n 
C26 H262 KLN sing 319 n n 
C26 H263 KLN sing 320 n n 
#
_atom_sites.entry_id                     2V0M 
_atom_sites.fract_transf_matrix[1][1]    0.004368 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000992 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015069 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007004 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 HEM A 1 1499 1499 HEM HEM . 
F 3 KLN A 1 1500 1500 KLN KLN . 
G 3 KLN A 1 1501 1501 KLN KLN . 
H 2 HEM B 1 1497 1497 HEM HEM . 
I 3 KLN B 1 1498 1498 KLN KLN . 
J 3 KLN B 1 1499 1499 KLN KLN . 
K 2 HEM C 1 1497 1497 HEM HEM . 
L 3 KLN C 1 1498 1498 KLN KLN . 
M 3 KLN C 1 1499 1499 KLN KLN . 
N 2 HEM D 1 1497 1497 HEM HEM . 
O 3 KLN D 1 1498 1498 KLN KLN . 
P 3 KLN D 1 1499 1499 KLN KLN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 KLN . . . M 3 22.974 2.98 22.287 1 60.26 ? C1 KLN 1499 C 1 
HETATM 2 O O1 KLN . . . M 3 23.586 2.884 20.463 1 60.44 ? O1 KLN 1499 C 1 
HETATM 3 C C6 KLN . . . M 3 24.918 3.549 20.692 1 60.56 ? C6 KLN 1499 C 1 
HETATM 4 C C7 KLN . . . M 3 25.483 3.237 22.402 1 60.84 ? C7 KLN 1499 C 1 
HETATM 5 O O2 KLN . . . M 3 24.482 2.24 22.814 1 60.17 ? O2 KLN 1499 C 1 
HETATM 6 C C14 KLN . . . M 3 26.058 3.368 19.612 1 59.89 ? C14 KLN 1499 C 1 
HETATM 7 O O3 KLN . . . M 3 25.393 2.941 18.305 1 59.03 ? O3 KLN 1499 C 1 
HETATM 8 C C15 KLN . . . M 3 25.262 4.022 17.469 1 58.75 ? C15 KLN 1499 C 1 
HETATM 9 C C16 KLN . . . M 3 24.295 5.005 17.715 1 58.9 ? C16 KLN 1499 C 1 
HETATM 10 C C17 KLN . . . M 3 24.156 6.088 16.858 1 58.52 ? C17 KLN 1499 C 1 
HETATM 11 C C18 KLN . . . M 3 24.969 6.209 15.729 1 58.11 ? C18 KLN 1499 C 1 
HETATM 12 C C19 KLN . . . M 3 25.931 5.218 15.473 1 58.39 ? C19 KLN 1499 C 1 
HETATM 13 C C20 KLN . . . M 3 26.071 4.133 16.333 1 58.78 ? C20 KLN 1499 C 1 
HETATM 14 N N3 KLN . . . M 3 24.778 7.333 14.899 1 57.59 ? N3 KLN 1499 C 1 
HETATM 15 C C21 KLN . . . M 3 25.91 8.264 14.999 1 56.48 ? C21 KLN 1499 C 1 
HETATM 16 C C22 KLN . . . M 3 25.47 9.594 14.378 1 55.95 ? C22 KLN 1499 C 1 
HETATM 17 N N4 KLN . . . M 3 24.998 9.362 12.993 1 55.72 ? N4 KLN 1499 C 1 
HETATM 18 C C23 KLN . . . M 3 24.108 8.21 12.726 1 56.11 ? C23 KLN 1499 C 1 
HETATM 19 C C24 KLN . . . M 3 24.608 6.965 13.487 1 56.73 ? C24 KLN 1499 C 1 
HETATM 20 C C25 KLN . . . M 3 25.362 10.186 11.982 1 55.6 ? C25 KLN 1499 C 1 
HETATM 21 O O4 KLN . . . M 3 24.962 9.976 10.857 1 55.49 ? O4 KLN 1499 C 1 
HETATM 22 C C26 KLN . . . M 3 26.269 11.371 12.213 1 55.61 ? C26 KLN 1499 C 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           22 
#