data_2V19 # _model_server_result.job_id 7TF2VzjUgjZaQOCs_rOtUw _model_server_result.datetime_utc '2025-07-01 21:42:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2v19 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":201}' # _entry.id 2V19 # _exptl.entry_id 2V19 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2V19 _cell.length_a 67.294 _cell.length_b 68.494 _cell.length_c 229.891 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2V19 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 N N N ? 3 P N N ? 3 S N N ? 3 V N N ? 3 Y N N ? 3 AA N N ? 3 DA N N ? 3 EA N N ? 3 GA N N ? 3 IA N N ? 3 KA N N ? 3 MA N N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 54 n y N1A C6A COA doub 55 n y C2A N3A COA doub 56 n y C2A H2A COA sing 57 n n N3A C4A COA sing 58 n y C4A C5A COA doub 59 n y C4A N9A COA sing 60 n y C5A C6A COA sing 61 n y C5A N7A COA sing 62 n y C6A N6A COA sing 63 n n N6A H61A COA sing 64 n n N6A H62A COA sing 65 n n N7A C8A COA doub 66 n y C8A N9A COA sing 67 n y C8A H8A COA sing 68 n n N9A C1B COA sing 69 n n C1B C2B COA sing 70 n n C1B O4B COA sing 71 n n C1B H1B COA sing 72 n n C2B O2B COA sing 73 n n C2B C3B COA sing 74 n n C2B H2B COA sing 75 n n O2B HO2A COA sing 76 n n C3B O3B COA sing 77 n n C3B C4B COA sing 78 n n C3B H3B COA sing 79 n n O3B P3B COA sing 80 n n P3B O7A COA doub 81 n n P3B O8A COA sing 82 n n P3B O9A COA sing 83 n n O8A HOA8 COA sing 84 n n O9A HOA9 COA sing 85 n n C4B O4B COA sing 86 n n C4B C5B COA sing 87 n n C4B H4B COA sing 88 n n C5B O5B COA sing 89 n n C5B H51A COA sing 90 n n C5B H52A COA sing 91 n n O5B P1A COA sing 92 n n P1A O1A COA doub 93 n n P1A O2A COA sing 94 n n P1A O3A COA sing 95 n n O2A HOA2 COA sing 96 n n O3A P2A COA sing 97 n n P2A O4A COA doub 98 n n P2A O5A COA sing 99 n n P2A O6A COA sing 100 n n O5A HOA5 COA sing 101 n n O6A CCP COA sing 102 n n CBP CCP COA sing 103 n n CBP CDP COA sing 104 n n CBP CEP COA sing 105 n n CBP CAP COA sing 106 n n CCP H121 COA sing 107 n n CCP H122 COA sing 108 n n CDP H131 COA sing 109 n n CDP H132 COA sing 110 n n CDP H133 COA sing 111 n n CEP H141 COA sing 112 n n CEP H142 COA sing 113 n n CEP H143 COA sing 114 n n CAP OAP COA sing 115 n n CAP C9P COA sing 116 n n CAP H10 COA sing 117 n n OAP HO1 COA sing 118 n n C9P O9P COA doub 119 n n C9P N8P COA sing 120 n n N8P C7P COA sing 121 n n N8P HN8 COA sing 122 n n C7P C6P COA sing 123 n n C7P H71 COA sing 124 n n C7P H72 COA sing 125 n n C6P C5P COA sing 126 n n C6P H61 COA sing 127 n n C6P H62 COA sing 128 n n C5P O5P COA doub 129 n n C5P N4P COA sing 130 n n N4P C3P COA sing 131 n n N4P HN4 COA sing 132 n n C3P C2P COA sing 133 n n C3P H31 COA sing 134 n n C3P H32 COA sing 135 n n C2P S1P COA sing 136 n n C2P H21 COA sing 137 n n C2P H22 COA sing 138 n n S1P HS1 COA sing 139 n n # _atom_sites.entry_id 2V19 _atom_sites.fract_transf_matrix[1][1] 0.01486 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0146 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00435 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 FMN A 1 101 101 FMN FMN . N 3 COA A 1 201 201 COA COA . O 4 CL A 1 1070 1070 CL CL . P 3 COA B 1 201 201 COA COA . Q 4 CL B 1 1070 1070 CL CL . R 2 FMN C 1 101 101 FMN FMN . S 3 COA C 1 201 201 COA COA . T 4 CL C 1 1070 1070 CL CL . U 2 FMN D 1 101 101 FMN FMN . V 3 COA D 1 201 201 COA COA . W 4 CL D 1 1070 1070 CL CL . X 2 FMN E 1 101 101 FMN FMN . Y 3 COA E 1 201 201 COA COA . Z 2 FMN F 1 101 101 FMN FMN . AA 3 COA F 1 201 201 COA COA . BA 4 CL F 1 1070 1070 CL CL . CA 2 FMN G 1 101 101 FMN FMN . DA 3 COA G 1 201 201 COA COA . EA 3 COA H 1 201 201 COA COA . FA 2 FMN I 1 101 101 FMN FMN . GA 3 COA I 1 201 201 COA COA . HA 2 FMN J 1 101 101 FMN FMN . IA 3 COA J 1 201 201 COA COA . JA 2 FMN K 1 101 101 FMN FMN . KA 3 COA K 1 201 201 COA COA . LA 2 FMN L 1 101 101 FMN FMN . MA 3 COA L 1 201 201 COA COA . NA 5 HOH A 1 2001 2001 HOH HOH . NA 5 HOH A 2 2002 2002 HOH HOH . NA 5 HOH A 3 2003 2003 HOH HOH . OA 5 HOH B 1 2001 2001 HOH HOH . OA 5 HOH B 2 2002 2002 HOH HOH . OA 5 HOH B 3 2003 2003 HOH HOH . OA 5 HOH B 4 2004 2004 HOH HOH . PA 5 HOH C 1 2001 2001 HOH HOH . PA 5 HOH C 2 2002 2002 HOH HOH . QA 5 HOH D 1 2001 2001 HOH HOH . QA 5 HOH D 2 2002 2002 HOH HOH . QA 5 HOH D 3 2003 2003 HOH HOH . QA 5 HOH D 4 2004 2004 HOH HOH . QA 5 HOH D 5 2005 2005 HOH HOH . RA 5 HOH E 1 2001 2001 HOH HOH . RA 5 HOH E 2 2002 2002 HOH HOH . SA 5 HOH F 1 2001 2001 HOH HOH . SA 5 HOH F 2 2002 2002 HOH HOH . SA 5 HOH F 3 2003 2003 HOH HOH . TA 5 HOH G 1 2001 2001 HOH HOH . TA 5 HOH G 2 2002 2002 HOH HOH . TA 5 HOH G 3 2003 2003 HOH HOH . UA 5 HOH I 1 2001 2001 HOH HOH . UA 5 HOH I 2 2002 2002 HOH HOH . UA 5 HOH I 3 2003 2003 HOH HOH . VA 5 HOH J 1 2001 2001 HOH HOH . VA 5 HOH J 2 2002 2002 HOH HOH . VA 5 HOH J 3 2003 2003 HOH HOH . VA 5 HOH J 4 2004 2004 HOH HOH . WA 5 HOH K 1 2001 2001 HOH HOH . WA 5 HOH K 2 2002 2002 HOH HOH . WA 5 HOH K 3 2003 2003 HOH HOH . WA 5 HOH K 4 2004 2004 HOH HOH . XA 5 HOH L 1 2001 2001 HOH HOH . XA 5 HOH L 2 2002 2002 HOH HOH . XA 5 HOH L 3 2003 2003 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . N 3 37.568 10.944 -0.204 1 40.9 ? N1A COA 201 A 1 HETATM 2 C C2A COA . . . N 3 38.885 10.543 -0.204 1 40.55 ? C2A COA 201 A 1 HETATM 3 N N3A COA . . . N 3 39.216 9.259 0.165 1 39.02 ? N3A COA 201 A 1 HETATM 4 C C4A COA . . . N 3 38.235 8.395 0.514 1 41.04 ? C4A COA 201 A 1 HETATM 5 C C5A COA . . . N 3 36.905 8.776 0.508 1 39.76 ? C5A COA 201 A 1 HETATM 6 C C6A COA . . . N 3 36.57 10.066 0.142 1 37.56 ? C6A COA 201 A 1 HETATM 7 N N6A COA . . . N 3 35.303 10.389 -0.067 1 36.63 ? N6A COA 201 A 1 HETATM 8 N N7A COA . . . N 3 36.168 7.716 0.903 1 41.72 ? N7A COA 201 A 1 HETATM 9 C C8A COA . . . N 3 36.99 6.671 1.149 1 42.6 ? C8A COA 201 A 1 HETATM 10 N N9A COA . . . N 3 38.27 7.087 0.904 1 43.75 ? N9A COA 201 A 1 HETATM 11 C C1B COA . . . N 3 39.499 6.296 0.977 1 50.6 ? C1B COA 201 A 1 HETATM 12 C C2B COA . . . N 3 39.515 5.328 2.151 1 53.67 ? C2B COA 201 A 1 HETATM 13 O O2B COA . . . N 3 39.972 5.935 3.341 1 51.19 ? O2B COA 201 A 1 HETATM 14 C C3B COA . . . N 3 40.495 4.307 1.62 1 56.05 ? C3B COA 201 A 1 HETATM 15 O O3B COA . . . N 3 41.791 4.856 1.697 1 58.99 ? O3B COA 201 A 1 HETATM 16 P P3B COA . . . N 3 42.814 4.521 2.877 1 58.15 ? P3B COA 201 A 1 HETATM 17 O O7A COA . . . N 3 43.039 3.03 2.885 1 58.27 ? O7A COA 201 A 1 HETATM 18 O O8A COA . . . N 3 44.09 5.264 2.583 1 53.93 ? O8A COA 201 A 1 HETATM 19 O O9A COA . . . N 3 42.219 4.895 4.217 1 57.73 ? O9A COA 201 A 1 HETATM 20 C C4B COA . . . N 3 40.148 4.228 0.145 1 56.44 ? C4B COA 201 A 1 HETATM 21 O O4B COA . . . N 3 39.654 5.516 -0.193 1 54.83 ? O4B COA 201 A 1 HETATM 22 C C5B COA . . . N 3 39.104 3.158 -0.147 1 57.77 ? C5B COA 201 A 1 HETATM 23 O O5B COA . . . N 3 39.671 1.873 0.012 1 60.51 ? O5B COA 201 A 1 HETATM 24 P P1A COA . . . N 3 40.379 1.062 -1.199 1 63.59 ? P1A COA 201 A 1 HETATM 25 O O1A COA . . . N 3 40.226 1.742 -2.542 1 58.71 ? O1A COA 201 A 1 HETATM 26 O O2A COA . . . N 3 41.831 0.82 -0.879 1 63.5 ? O2A COA 201 A 1 HETATM 27 O O3A COA . . . N 3 39.621 -0.352 -1.17 1 60.56 ? O3A COA 201 A 1 HETATM 28 P P2A COA . . . N 3 38.167 -0.519 -1.826 1 56.25 ? P2A COA 201 A 1 HETATM 29 O O4A COA . . . N 3 37.488 -1.747 -1.273 1 55.83 ? O4A COA 201 A 1 HETATM 30 O O5A COA . . . N 3 37.334 0.722 -1.628 1 53.05 ? O5A COA 201 A 1 HETATM 31 O O6A COA . . . N 3 38.51 -0.778 -3.367 1 54.79 ? O6A COA 201 A 1 HETATM 32 C CBP COA . . . N 3 39.764 -1.648 -5.196 1 49.93 ? CBP COA 201 A 1 HETATM 33 C CCP COA . . . N 3 39.471 -1.749 -3.707 1 51.2 ? CCP COA 201 A 1 HETATM 34 C CDP COA . . . N 3 41 -2.461 -5.547 1 46.43 ? CDP COA 201 A 1 HETATM 35 C CEP COA . . . N 3 38.58 -2.195 -5.982 1 47.23 ? CEP COA 201 A 1 HETATM 36 C CAP COA . . . N 3 39.989 -0.185 -5.543 1 51.04 ? CAP COA 201 A 1 HETATM 37 O OAP COA . . . N 3 40.985 0.367 -4.71 1 51.17 ? OAP COA 201 A 1 HETATM 38 C C9P COA . . . N 3 40.408 -0.062 -6.974 1 51.44 ? C9P COA 201 A 1 HETATM 39 O O9P COA . . . N 3 39.509 -0.396 -7.996 1 48.99 ? O9P COA 201 A 1 HETATM 40 N N8P COA . . . N 3 41.639 0.373 -7.203 1 53.13 ? N8P COA 201 A 1 HETATM 41 C C7P COA . . . N 3 42.07 0.767 -8.526 1 52.22 ? C7P COA 201 A 1 HETATM 42 C C6P COA . . . N 3 42.457 -0.44 -9.365 1 52.21 ? C6P COA 201 A 1 HETATM 43 C C5P COA . . . N 3 43.232 0.012 -10.58 1 54.06 ? C5P COA 201 A 1 HETATM 44 O O5P COA . . . N 3 42.667 0.605 -11.51 1 50.89 ? O5P COA 201 A 1 HETATM 45 N N4P COA . . . N 3 44.533 -0.255 -10.586 1 54.99 ? N4P COA 201 A 1 HETATM 46 C C3P COA . . . N 3 45.313 -0.181 -11.806 1 52.05 ? C3P COA 201 A 1 HETATM 47 C C2P COA . . . N 3 45.208 -1.472 -12.608 1 53.27 ? C2P COA 201 A 1 HETATM 48 S S1P COA . . . N 3 46.221 -1.417 -14.097 1 53.82 ? S1P COA 201 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 48 #