data_2V21
#
_model_server_result.job_id            LiZPnKHJWSTQMUhFxcA1Pg 
_model_server_result.datetime_utc      '2024-10-19 23:53:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2v21 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":101}' 
#
_entry.id    2V21 
#
_exptl.entry_id    2V21 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2V21 
_cell.length_a            65.765 
_cell.length_b            65.765 
_cell.length_c            202.408 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2V21 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 65.765 65.765 101.204 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 I N N 
? 2 J N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 54 n n 
N1 C10 FMN doub 55 n n 
C2 O2 FMN doub 56 n n 
C2 N3 FMN sing 57 n n 
N3 C4 FMN sing 58 n n 
N3 HN3 FMN sing 59 n n 
C4 O4 FMN doub 60 n n 
C4 C4A FMN sing 61 n n 
C4A N5 FMN doub 62 n n 
C4A C10 FMN sing 63 n n 
N5 C5A FMN sing 64 n n 
C5A C6 FMN doub 65 n y 
C5A C9A FMN sing 66 n y 
C6 C7 FMN sing 67 n y 
C6 H6 FMN sing 68 n n 
C7 C7M FMN sing 69 n n 
C7 C8 FMN doub 70 n y 
C7M HM71 FMN sing 71 n n 
C7M HM72 FMN sing 72 n n 
C7M HM73 FMN sing 73 n n 
C8 C8M FMN sing 74 n n 
C8 C9 FMN sing 75 n y 
C8M HM81 FMN sing 76 n n 
C8M HM82 FMN sing 77 n n 
C8M HM83 FMN sing 78 n n 
C9 C9A FMN doub 79 n y 
C9 H9 FMN sing 80 n n 
C9A N10 FMN sing 81 n n 
N10 C10 FMN sing 82 n n 
N10 C1' FMN sing 83 n n 
C1' C2' FMN sing 84 n n 
C1' "H1'1" FMN sing 85 n n 
C1' "H1'2" FMN sing 86 n n 
C2' O2' FMN sing 87 n n 
C2' C3' FMN sing 88 n n 
C2' H2' FMN sing 89 n n 
O2' HO2' FMN sing 90 n n 
C3' O3' FMN sing 91 n n 
C3' C4' FMN sing 92 n n 
C3' H3' FMN sing 93 n n 
O3' HO3' FMN sing 94 n n 
C4' O4' FMN sing 95 n n 
C4' C5' FMN sing 96 n n 
C4' H4' FMN sing 97 n n 
O4' HO4' FMN sing 98 n n 
C5' O5' FMN sing 99 n n 
C5' "H5'1" FMN sing 100 n n 
C5' "H5'2" FMN sing 101 n n 
O5' P FMN sing 102 n n 
P O1P FMN doub 103 n n 
P O2P FMN sing 104 n n 
P O3P FMN sing 105 n n 
O2P HOP2 FMN sing 106 n n 
O3P HOP3 FMN sing 107 n n 
#
_atom_sites.entry_id                     2V21 
_atom_sites.fract_transf_matrix[1][1]    0.015206 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015206 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004941 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 FMN A 1 101 101 FMN FMN . 
H 3 NA A 1 1069 1069 NA NA . 
I 2 FMN C 1 101 101 FMN FMN . 
J 2 FMN F 1 101 101 FMN FMN . 
K 3 NA F 1 1069 1069 NA NA . 
L 4 HOH A 1 2001 2001 HOH HOH . 
M 4 HOH B 1 2001 2001 HOH HOH . 
N 4 HOH C 1 2001 2001 HOH HOH . 
N 4 HOH C 2 2002 2002 HOH HOH . 
N 4 HOH C 3 2003 2003 HOH HOH . 
N 4 HOH C 4 2004 2004 HOH HOH . 
N 4 HOH C 5 2005 2005 HOH HOH . 
N 4 HOH C 6 2006 2006 HOH HOH . 
O 4 HOH E 1 2001 2001 HOH HOH . 
O 4 HOH E 2 2002 2002 HOH HOH . 
P 4 HOH F 1 2001 2001 HOH HOH . 
P 4 HOH F 2 2002 2002 HOH HOH . 
P 4 HOH F 3 2003 2003 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . J 2 76.071 -8.311 51.797 0.7 79.13 ? N1 FMN 101 F 1 
HETATM 2 C C2 FMN . . . J 2 76.736 -7.249 51.216 0.7 78.81 ? C2 FMN 101 F 1 
HETATM 3 O O2 FMN . . . J 2 77.913 -7.371 50.881 0.7 78.82 ? O2 FMN 101 F 1 
HETATM 4 N N3 FMN . . . J 2 76.079 -6.059 50.992 0.7 78.78 ? N3 FMN 101 F 1 
HETATM 5 C C4 FMN . . . J 2 74.752 -5.917 51.375 0.7 78.97 ? C4 FMN 101 F 1 
HETATM 6 O O4 FMN . . . J 2 74.404 -4.794 51.73 0.7 78.75 ? O4 FMN 101 F 1 
HETATM 7 C C4A FMN . . . J 2 74.076 -6.995 51.948 0.7 78.96 ? C4A FMN 101 F 1 
HETATM 8 N N5 FMN . . . J 2 72.752 -6.871 52.314 0.7 78.59 ? N5 FMN 101 F 1 
HETATM 9 C C5A FMN . . . J 2 72.085 -7.928 52.893 0.7 78.76 ? C5A FMN 101 F 1 
HETATM 10 C C6 FMN . . . J 2 70.752 -7.765 53.242 0.7 78.69 ? C6 FMN 101 F 1 
HETATM 11 C C7 FMN . . . J 2 70.049 -8.808 53.824 0.7 78.68 ? C7 FMN 101 F 1 
HETATM 12 C C7M FMN . . . J 2 68.553 -8.709 53.869 0.7 77.97 ? C7M FMN 101 F 1 
HETATM 13 C C8 FMN . . . J 2 70.69 -10.025 54.055 0.7 78.59 ? C8 FMN 101 F 1 
HETATM 14 C C8M FMN . . . J 2 69.932 -11.19 54.616 0.7 78.19 ? C8M FMN 101 F 1 
HETATM 15 C C9 FMN . . . J 2 72.026 -10.197 53.711 0.7 78.64 ? C9 FMN 101 F 1 
HETATM 16 C C9A FMN . . . J 2 72.735 -9.144 53.116 0.7 79.08 ? C9A FMN 101 F 1 
HETATM 17 N N10 FMN . . . J 2 74.073 -9.272 52.742 0.7 79.42 ? N10 FMN 101 F 1 
HETATM 18 C C10 FMN . . . J 2 74.739 -8.199 52.166 0.7 79.03 ? C10 FMN 101 F 1 
HETATM 19 C C1' FMN . . . J 2 74.795 -10.59 52.841 0.7 80.3 ? C1' FMN 101 F 1 
HETATM 20 C C2' FMN . . . J 2 75.518 -10.67 54.185 0.7 81.11 ? C2' FMN 101 F 1 
HETATM 21 O O2' FMN . . . J 2 76.352 -9.542 54.364 0.7 81.54 ? O2' FMN 101 F 1 
HETATM 22 C C3' FMN . . . J 2 76.391 -11.918 54.301 0.7 82.3 ? C3' FMN 101 F 1 
HETATM 23 O O3' FMN . . . J 2 77.484 -11.831 53.41 0.7 82.18 ? O3' FMN 101 F 1 
HETATM 24 C C4' FMN . . . J 2 75.636 -13.209 53.999 0.7 83.22 ? C4' FMN 101 F 1 
HETATM 25 O O4' FMN . . . J 2 74.322 -13.149 54.518 0.7 83.32 ? O4' FMN 101 F 1 
HETATM 26 C C5' FMN . . . J 2 76.378 -14.397 54.595 0.7 83.98 ? C5' FMN 101 F 1 
HETATM 27 O O5' FMN . . . J 2 76.351 -14.287 56.001 0.7 84.93 ? O5' FMN 101 F 1 
HETATM 28 P P FMN . . . J 2 76.542 -15.586 56.933 0.7 85.84 ? P FMN 101 F 1 
HETATM 29 O O1P FMN . . . J 2 76.595 -15.097 58.365 0.7 85.87 ? O1P FMN 101 F 1 
HETATM 30 O O2P FMN . . . J 2 75.378 -16.535 56.745 0.7 84.73 ? O2P FMN 101 F 1 
HETATM 31 O O3P FMN . . . J 2 77.841 -16.267 56.555 0.7 85.05 ? O3P FMN 101 F 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           537 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           31 
#