data_2V50 # _model_server_result.job_id eW004gPQ-wdPmpD3iTTQjg _model_server_result.datetime_utc '2024-11-24 04:07:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2v50 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":2032}' # _entry.id 2V50 # _exptl.entry_id 2V50 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 86.99 _cell.angle_beta 69.7 _cell.angle_gamma 88.16 _cell.entry_id 2V50 _cell.length_a 125.05 _cell.length_b 134.58 _cell.length_c 151.02 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2V50 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J 1 1 D,E,F,K,L,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 192 n n C1B O1B LMT sing 193 n n C1B O5B LMT sing 194 n n C1B H1B LMT sing 195 n n C2B C3B LMT sing 196 n n C2B O2B LMT sing 197 n n C2B H2B LMT sing 198 n n C3B C4B LMT sing 199 n n C3B O3B LMT sing 200 n n C3B H3B LMT sing 201 n n C4B C5B LMT sing 202 n n C4B O4' LMT sing 203 n n C4B H4B LMT sing 204 n n C5B C6B LMT sing 205 n n C5B O5B LMT sing 206 n n C5B H5B LMT sing 207 n n C6B O6B LMT sing 208 n n C6B "H6'2" LMT sing 209 n n C6B "H6'1" LMT sing 210 n n O1B C4' LMT sing 211 n n O2B H2O1 LMT sing 212 n n O3B H3O1 LMT sing 213 n n O4' H4O1 LMT sing 214 n n O6B H6B LMT sing 215 n n C1' C2' LMT sing 216 n n C1' O1' LMT sing 217 n n C1' O5' LMT sing 218 n n C1' H1' LMT sing 219 n n C2' C3' LMT sing 220 n n C2' O2' LMT sing 221 n n C2' H2' LMT sing 222 n n C3' C4' LMT sing 223 n n C3' O3' LMT sing 224 n n C3' H3' LMT sing 225 n n C4' C5' LMT sing 226 n n C4' H4' LMT sing 227 n n C5' C6' LMT sing 228 n n C5' O5' LMT sing 229 n n C5' H5' LMT sing 230 n n C6' O6' LMT sing 231 n n C6' H6D LMT sing 232 n n C6' H6E LMT sing 233 n n O1' C1 LMT sing 234 n n O2' H2O2 LMT sing 235 n n O3' H3O2 LMT sing 236 n n O6' H6' LMT sing 237 n n C1 C2 LMT sing 238 n n C1 H12 LMT sing 239 n n C1 H11 LMT sing 240 n n C2 C3 LMT sing 241 n n C2 H22 LMT sing 242 n n C2 H21 LMT sing 243 n n C3 C4 LMT sing 244 n n C3 H32 LMT sing 245 n n C3 H31 LMT sing 246 n n C4 C5 LMT sing 247 n n C4 H42 LMT sing 248 n n C4 H41 LMT sing 249 n n C5 C6 LMT sing 250 n n C5 H52 LMT sing 251 n n C5 H51 LMT sing 252 n n C6 C7 LMT sing 253 n n C6 H62 LMT sing 254 n n C6 H61 LMT sing 255 n n C7 C8 LMT sing 256 n n C7 H72 LMT sing 257 n n C7 H71 LMT sing 258 n n C8 C9 LMT sing 259 n n C8 H82 LMT sing 260 n n C8 H81 LMT sing 261 n n C9 C10 LMT sing 262 n n C9 H92 LMT sing 263 n n C9 H91 LMT sing 264 n n C10 C11 LMT sing 265 n n C10 H102 LMT sing 266 n n C10 H101 LMT sing 267 n n C11 C12 LMT sing 268 n n C11 H112 LMT sing 269 n n C11 H111 LMT sing 270 n n C12 H123 LMT sing 271 n n C12 H122 LMT sing 272 n n C12 H121 LMT sing 273 n n # _atom_sites.entry_id 2V50 _atom_sites.fract_transf_matrix[1][1] 0.007997 _atom_sites.fract_transf_matrix[1][2] -0.000257 _atom_sites.fract_transf_matrix[1][3] -0.00295 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007434 _atom_sites.fract_transf_matrix[2][3] -0.000328 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007067 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 LMT A 1 2026 2026 LMT LMT . H 2 LMT B 1 2031 2031 LMT LMT . I 2 LMT B 1 2032 2032 LMT LMT . J 2 LMT B 1 2033 2033 LMT LMT . K 2 LMT D 1 2026 2026 LMT LMT . L 2 LMT E 1 2031 2031 LMT LMT . M 2 LMT E 1 2032 2032 LMT LMT . N 2 LMT E 1 2033 2033 LMT LMT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . I 2 29.37 33.098 -20.792 1 55 ? C1B LMT 2032 B 1 HETATM 2 C C2B LMT . . . I 2 29.836 32.014 -21.771 1 58.29 ? C2B LMT 2032 B 1 HETATM 3 C C3B LMT . . . I 2 29.067 31.959 -23.074 1 67.3 ? C3B LMT 2032 B 1 HETATM 4 C C4B LMT . . . I 2 27.604 31.768 -22.731 1 65.44 ? C4B LMT 2032 B 1 HETATM 5 C C5B LMT . . . I 2 27.164 32.938 -21.886 1 61.91 ? C5B LMT 2032 B 1 HETATM 6 C C6B LMT . . . I 2 25.733 32.584 -21.528 1 78.21 ? C6B LMT 2032 B 1 HETATM 7 O O1B LMT . . . I 2 29.946 34.278 -21.358 1 77.58 ? O1B LMT 2032 B 1 HETATM 8 O O2B LMT . . . I 2 31.246 32.152 -21.962 1 64.22 ? O2B LMT 2032 B 1 HETATM 9 O O3B LMT . . . I 2 29.528 30.841 -23.816 1 75.14 ? O3B LMT 2032 B 1 HETATM 10 O O4' LMT . . . I 2 26.8 31.699 -23.915 1 77.64 ? O4' LMT 2032 B 1 HETATM 11 O O5B LMT . . . I 2 27.935 32.984 -20.678 1 62.71 ? O5B LMT 2032 B 1 HETATM 12 O O6B LMT . . . I 2 25.71 31.303 -20.875 1 86.77 ? O6B LMT 2032 B 1 HETATM 13 C C1' LMT . . . I 2 29.925 38.431 -20.55 1 58.67 ? C1' LMT 2032 B 1 HETATM 14 C C2' LMT . . . I 2 31.127 37.566 -20.203 1 57.03 ? C2' LMT 2032 B 1 HETATM 15 C C3' LMT . . . I 2 31.038 36.257 -20.981 1 67.42 ? C3' LMT 2032 B 1 HETATM 16 C C4' LMT . . . I 2 29.81 35.483 -20.59 1 71.26 ? C4' LMT 2032 B 1 HETATM 17 C C5' LMT . . . I 2 28.769 36.45 -21.132 1 52.99 ? C5' LMT 2032 B 1 HETATM 18 C C6' LMT . . . I 2 27.392 35.852 -20.943 1 56.05 ? C6' LMT 2032 B 1 HETATM 19 O O1' LMT . . . I 2 30.008 39.749 -19.927 1 59.75 ? O1' LMT 2032 B 1 HETATM 20 O O2' LMT . . . I 2 32.349 38.245 -20.485 1 69.86 ? O2' LMT 2032 B 1 HETATM 21 O O3' LMT . . . I 2 32.18 35.437 -20.727 1 73.75 ? O3' LMT 2032 B 1 HETATM 22 O O5' LMT . . . I 2 28.698 37.699 -20.41 1 60.43 ? O5' LMT 2032 B 1 HETATM 23 O O6' LMT . . . I 2 27.168 35.662 -19.546 1 70.43 ? O6' LMT 2032 B 1 HETATM 24 C C1 LMT . . . I 2 29.075 40.5 -20.728 1 64.26 ? C1 LMT 2032 B 1 HETATM 25 C C2 LMT . . . I 2 29.367 42.007 -20.862 1 92.93 ? C2 LMT 2032 B 1 HETATM 26 C C3 LMT . . . I 2 28.3 42.691 -21.745 1 106.47 ? C3 LMT 2032 B 1 HETATM 27 C C4 LMT . . . I 2 28.63 44.15 -22.101 1 86.1 ? C4 LMT 2032 B 1 HETATM 28 C C5 LMT . . . I 2 28.877 45.064 -20.9 1 128.02 ? C5 LMT 2032 B 1 HETATM 29 C C6 LMT . . . I 2 27.72 45.222 -19.905 1 157.12 ? C6 LMT 2032 B 1 HETATM 30 C C7 LMT . . . I 2 28.21 46.195 -18.823 1 169.91 ? C7 LMT 2032 B 1 HETATM 31 C C8 LMT . . . I 2 27.205 46.54 -17.72 1 162.41 ? C8 LMT 2032 B 1 HETATM 32 C C9 LMT . . . I 2 27.889 47.551 -16.793 1 151.81 ? C9 LMT 2032 B 1 HETATM 33 C C10 LMT . . . I 2 28.293 48.764 -17.643 1 140.51 ? C10 LMT 2032 B 1 HETATM 34 C C11 LMT . . . I 2 29.017 49.853 -16.855 1 123.03 ? C11 LMT 2032 B 1 HETATM 35 C C12 LMT . . . I 2 29.403 51.005 -17.789 1 72.58 ? C12 LMT 2032 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 49 _model_server_stats.query_time_ms 225 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 35 #