data_2V50 # _model_server_result.job_id I41Z2DI3oZFip5cpDNvt8g _model_server_result.datetime_utc '2024-11-13 03:43:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2v50 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":2033}' # _entry.id 2V50 # _exptl.entry_id 2V50 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 86.99 _cell.angle_beta 69.7 _cell.angle_gamma 88.16 _cell.entry_id 2V50 _cell.length_a 125.05 _cell.length_b 134.58 _cell.length_c 151.02 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2V50 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J 1 1 D,E,F,K,L,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 192 n n C1B O1B LMT sing 193 n n C1B O5B LMT sing 194 n n C1B H1B LMT sing 195 n n C2B C3B LMT sing 196 n n C2B O2B LMT sing 197 n n C2B H2B LMT sing 198 n n C3B C4B LMT sing 199 n n C3B O3B LMT sing 200 n n C3B H3B LMT sing 201 n n C4B C5B LMT sing 202 n n C4B O4' LMT sing 203 n n C4B H4B LMT sing 204 n n C5B C6B LMT sing 205 n n C5B O5B LMT sing 206 n n C5B H5B LMT sing 207 n n C6B O6B LMT sing 208 n n C6B "H6'2" LMT sing 209 n n C6B "H6'1" LMT sing 210 n n O1B C4' LMT sing 211 n n O2B H2O1 LMT sing 212 n n O3B H3O1 LMT sing 213 n n O4' H4O1 LMT sing 214 n n O6B H6B LMT sing 215 n n C1' C2' LMT sing 216 n n C1' O1' LMT sing 217 n n C1' O5' LMT sing 218 n n C1' H1' LMT sing 219 n n C2' C3' LMT sing 220 n n C2' O2' LMT sing 221 n n C2' H2' LMT sing 222 n n C3' C4' LMT sing 223 n n C3' O3' LMT sing 224 n n C3' H3' LMT sing 225 n n C4' C5' LMT sing 226 n n C4' H4' LMT sing 227 n n C5' C6' LMT sing 228 n n C5' O5' LMT sing 229 n n C5' H5' LMT sing 230 n n C6' O6' LMT sing 231 n n C6' H6D LMT sing 232 n n C6' H6E LMT sing 233 n n O1' C1 LMT sing 234 n n O2' H2O2 LMT sing 235 n n O3' H3O2 LMT sing 236 n n O6' H6' LMT sing 237 n n C1 C2 LMT sing 238 n n C1 H12 LMT sing 239 n n C1 H11 LMT sing 240 n n C2 C3 LMT sing 241 n n C2 H22 LMT sing 242 n n C2 H21 LMT sing 243 n n C3 C4 LMT sing 244 n n C3 H32 LMT sing 245 n n C3 H31 LMT sing 246 n n C4 C5 LMT sing 247 n n C4 H42 LMT sing 248 n n C4 H41 LMT sing 249 n n C5 C6 LMT sing 250 n n C5 H52 LMT sing 251 n n C5 H51 LMT sing 252 n n C6 C7 LMT sing 253 n n C6 H62 LMT sing 254 n n C6 H61 LMT sing 255 n n C7 C8 LMT sing 256 n n C7 H72 LMT sing 257 n n C7 H71 LMT sing 258 n n C8 C9 LMT sing 259 n n C8 H82 LMT sing 260 n n C8 H81 LMT sing 261 n n C9 C10 LMT sing 262 n n C9 H92 LMT sing 263 n n C9 H91 LMT sing 264 n n C10 C11 LMT sing 265 n n C10 H102 LMT sing 266 n n C10 H101 LMT sing 267 n n C11 C12 LMT sing 268 n n C11 H112 LMT sing 269 n n C11 H111 LMT sing 270 n n C12 H123 LMT sing 271 n n C12 H122 LMT sing 272 n n C12 H121 LMT sing 273 n n # _atom_sites.entry_id 2V50 _atom_sites.fract_transf_matrix[1][1] 0.007997 _atom_sites.fract_transf_matrix[1][2] -0.000257 _atom_sites.fract_transf_matrix[1][3] -0.00295 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007434 _atom_sites.fract_transf_matrix[2][3] -0.000328 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007067 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 LMT A 1 2026 2026 LMT LMT . H 2 LMT B 1 2031 2031 LMT LMT . I 2 LMT B 1 2032 2032 LMT LMT . J 2 LMT B 1 2033 2033 LMT LMT . K 2 LMT D 1 2026 2026 LMT LMT . L 2 LMT E 1 2031 2031 LMT LMT . M 2 LMT E 1 2032 2032 LMT LMT . N 2 LMT E 1 2033 2033 LMT LMT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . J 2 72.257 29.059 -7.955 1 149.53 ? C1B LMT 2033 B 1 HETATM 2 C C2B LMT . . . J 2 71.198 27.911 -7.895 1 159.25 ? C2B LMT 2033 B 1 HETATM 3 C C3B LMT . . . J 2 70.538 27.809 -6.492 1 155.69 ? C3B LMT 2033 B 1 HETATM 4 C C4B LMT . . . J 2 71.626 28.175 -5.547 1 128.27 ? C4B LMT 2033 B 1 HETATM 5 C C5B LMT . . . J 2 71.816 29.683 -5.761 1 144.99 ? C5B LMT 2033 B 1 HETATM 6 C C6B LMT . . . J 2 73.163 30.035 -5.127 1 129.86 ? C6B LMT 2033 B 1 HETATM 7 O O1B LMT . . . J 2 72.72 29.273 -9.322 1 155.51 ? O1B LMT 2033 B 1 HETATM 8 O O2B LMT . . . J 2 70.104 27.94 -8.829 1 147.43 ? O2B LMT 2033 B 1 HETATM 9 O O3B LMT . . . J 2 70.092 26.48 -6.213 1 134.24 ? O3B LMT 2033 B 1 HETATM 10 O O4' LMT . . . J 2 71.164 27.97 -4.222 1 100.97 ? O4' LMT 2033 B 1 HETATM 11 O O5B LMT . . . J 2 71.788 30.125 -7.154 1 146.23 ? O5B LMT 2033 B 1 HETATM 12 O O6B LMT . . . J 2 73.362 31.448 -5.166 1 131.93 ? O6B LMT 2033 B 1 HETATM 13 C C1' LMT . . . J 2 72.182 31.821 -11.248 1 158.59 ? C1' LMT 2033 B 1 HETATM 14 C C2' LMT . . . J 2 73.241 30.739 -11.547 1 162.93 ? C2' LMT 2033 B 1 HETATM 15 C C3' LMT . . . J 2 74.184 30.507 -10.322 1 153.57 ? C3' LMT 2033 B 1 HETATM 16 C C4' LMT . . . J 2 73.508 30.371 -8.965 1 154.15 ? C4' LMT 2033 B 1 HETATM 17 C C5' LMT . . . J 2 72.967 31.868 -8.997 1 159.31 ? C5' LMT 2033 B 1 HETATM 18 C C6' LMT . . . J 2 73.581 32.816 -7.93 1 162.23 ? C6' LMT 2033 B 1 HETATM 19 O O1' LMT . . . J 2 71.601 32.449 -12.444 1 154.38 ? O1' LMT 2033 B 1 HETATM 20 O O2' LMT . . . J 2 72.602 29.514 -11.926 1 166.3 ? O2' LMT 2033 B 1 HETATM 21 O O3' LMT . . . J 2 75.199 31.515 -10.268 1 147.46 ? O3' LMT 2033 B 1 HETATM 22 O O5' LMT . . . J 2 72.783 32.628 -10.266 1 148.49 ? O5' LMT 2033 B 1 HETATM 23 O O6' LMT . . . J 2 72.68 33.911 -7.697 1 145.82 ? O6' LMT 2033 B 1 HETATM 24 C C1 LMT . . . J 2 70.894 32.029 -13.64 1 150.36 ? C1 LMT 2033 B 1 HETATM 25 C C2 LMT . . . J 2 69.54 31.31 -13.643 1 156.56 ? C2 LMT 2033 B 1 HETATM 26 C C3 LMT . . . J 2 69.032 31.301 -15.099 1 173.22 ? C3 LMT 2033 B 1 HETATM 27 C C4 LMT . . . J 2 67.641 30.67 -15.287 1 181.72 ? C4 LMT 2033 B 1 HETATM 28 C C5 LMT . . . J 2 67.126 30.909 -16.725 1 183.17 ? C5 LMT 2033 B 1 HETATM 29 C C6 LMT . . . J 2 65.717 30.33 -16.968 1 172.67 ? C6 LMT 2033 B 1 HETATM 30 C C7 LMT . . . J 2 65.674 28.802 -16.927 1 174.55 ? C7 LMT 2033 B 1 HETATM 31 C C8 LMT . . . J 2 64.243 28.244 -17.035 1 163.04 ? C8 LMT 2033 B 1 HETATM 32 C C9 LMT . . . J 2 63.337 28.605 -18.242 1 175.21 ? C9 LMT 2033 B 1 HETATM 33 C C10 LMT . . . J 2 63.797 28.234 -19.666 1 176.01 ? C10 LMT 2033 B 1 HETATM 34 C C11 LMT . . . J 2 65.039 28.979 -20.149 1 171.23 ? C11 LMT 2033 B 1 HETATM 35 C C12 LMT . . . J 2 64.77 30.49 -20.204 1 155.57 ? C12 LMT 2033 B 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 35 #