data_2V8V # _model_server_result.job_id u_nsu765mA6fiEDDy823Fw _model_server_result.datetime_utc '2024-11-14 23:55:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2v8v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1456}' # _entry.id 2V8V # _exptl.entry_id 2V8V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 67.45 _cell.angle_beta 67.81 _cell.angle_gamma 62.75 _cell.entry_id 2V8V _cell.length_a 77.478 _cell.length_b 84.903 _cell.length_c 104.848 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2V8V _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dimeric 2 author_and_software_defined_assembly 1 PQS dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,Q,R 1 1 C,D,J,K,L,M,N,O,P,S,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 J N N ? 2 K N N ? 2 N N N ? 2 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C SG CYS 167 C CYS 168 1_555 L S4 DTT . C DTT 1456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc1 A NE2 HIS 113 A HIS 114 1_555 E ZN ZN . A ZN 1455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc2 A OD1 ASP 124 A ASP 125 1_555 E ZN ZN . A ZN 1455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc3 A OD2 ASP 124 A ASP 125 1_555 F ZN ZN . A ZN 1456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc4 A OE2 GLU 159 A GLU 160 1_555 F ZN ZN . A ZN 1456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? metalc ? metalc5 A NE2 HIS 225 A HIS 226 1_555 E ZN ZN . A ZN 1455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc6 A NE2 HIS 420 A HIS 421 1_555 F ZN ZN . A ZN 1456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc7 E ZN ZN . A ZN 1455 1_555 Q O HOH . A HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc8 F ZN ZN . A ZN 1456 1_555 Q O HOH . A HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc9 B NE2 HIS 113 B HIS 114 1_555 G ZN ZN . B ZN 1454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc10 B OD1 ASP 124 B ASP 125 1_555 G ZN ZN . B ZN 1454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc11 B OD2 ASP 124 B ASP 125 1_555 H ZN ZN . B ZN 1455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc12 B OE2 GLU 159 B GLU 160 1_555 H ZN ZN . B ZN 1455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc13 B NE2 HIS 225 B HIS 226 1_555 G ZN ZN . B ZN 1454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc14 B NE2 HIS 420 B HIS 421 1_555 H ZN ZN . B ZN 1455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc15 G ZN ZN . B ZN 1454 1_555 R O HOH . B HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc16 H ZN ZN . B ZN 1455 1_555 R O HOH . B HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? metalc ? metalc17 C NE2 HIS 113 C HIS 114 1_555 J ZN ZN . C ZN 1454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc18 C OD1 ASP 124 C ASP 125 1_555 J ZN ZN . C ZN 1454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc19 C OD2 ASP 124 C ASP 125 1_555 K ZN ZN . C ZN 1455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? metalc ? metalc20 C OE2 GLU 159 C GLU 160 1_555 K ZN ZN . C ZN 1455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc21 C NE2 HIS 225 C HIS 226 1_555 J ZN ZN . C ZN 1454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc22 C NE2 HIS 420 C HIS 421 1_555 K ZN ZN . C ZN 1455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc23 J ZN ZN . C ZN 1454 1_555 S O HOH . C HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc24 K ZN ZN . C ZN 1455 1_555 S O HOH . C HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc25 D NE2 HIS 113 D HIS 114 1_555 N ZN ZN . D ZN 1454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc26 D OD1 ASP 124 D ASP 125 1_555 N ZN ZN . D ZN 1454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc27 D OD2 ASP 124 D ASP 125 1_555 O ZN ZN . D ZN 1455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? metalc ? metalc28 D OE2 GLU 159 D GLU 160 1_555 O ZN ZN . D ZN 1455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc29 D NE2 HIS 225 D HIS 226 1_555 N ZN ZN . D ZN 1454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc30 D NE2 HIS 420 D HIS 421 1_555 O ZN ZN . D ZN 1455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc31 N ZN ZN . D ZN 1454 1_555 T O HOH . D HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? metalc ? metalc32 O ZN ZN . D ZN 1455 1_555 T O HOH . D HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2V8V _atom_sites.fract_transf_matrix[1][1] 0.012907 _atom_sites.fract_transf_matrix[1][2] -0.006648 _atom_sites.fract_transf_matrix[1][3] -0.003687 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013249 _atom_sites.fract_transf_matrix[2][3] -0.003505 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010655 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 1455 1455 ZN ZN . F 2 ZN A 1 1456 1456 ZN ZN . G 2 ZN B 1 1454 1454 ZN ZN . H 2 ZN B 1 1455 1455 ZN ZN . I 3 URP B 1 1456 1456 URP URP . J 2 ZN C 1 1454 1454 ZN ZN . K 2 ZN C 1 1455 1455 ZN ZN . L 4 DTT C 1 1456 1456 DTT DTT . M 3 URP C 1 1457 1457 URP URP . N 2 ZN D 1 1454 1454 ZN ZN . O 2 ZN D 1 1455 1455 ZN ZN . P 3 URP D 1 1456 1456 URP URP . Q 5 HOH A 1 2001 2001 HOH HOH . R 5 HOH B 1 2001 2001 HOH HOH . S 5 HOH C 1 2001 2001 HOH HOH . T 5 HOH D 1 2001 2001 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x -3.033 _atom_site.Cartn_y -5.833 _atom_site.Cartn_z 0.511 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1456 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #