data_2VAO
#
_model_server_result.job_id            wpDvZIm_90AuYTBRq2j0YQ 
_model_server_result.datetime_utc      '2024-11-28 07:21:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2vao 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":600}' 
#
_entry.id    2VAO 
#
_exptl.entry_id    2VAO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2VAO 
_cell.length_a            128.38 
_cell.length_b            128.38 
_cell.length_c            130.19 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2VAO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        79 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 4' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 128.38 0 0 
3 'crystal symmetry operation' 4_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 128.38 0 
4 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 128.38 128.38 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NE2 HIS 422 A HIS 422 1_555 C C8M FAD . A FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.727 ? 
covale ? covale2 B NE2 HIS 422 B HIS 422 1_555 E C8M FAD . B FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.726 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 107 n n 
PA O2A FAD sing 108 n n 
PA O5B FAD sing 109 n n 
PA O3P FAD sing 110 n n 
O2A HOA2 FAD sing 111 n n 
O5B C5B FAD sing 112 n n 
C5B C4B FAD sing 113 n n 
C5B H51A FAD sing 114 n n 
C5B H52A FAD sing 115 n n 
C4B O4B FAD sing 116 n n 
C4B C3B FAD sing 117 n n 
C4B H4B FAD sing 118 n n 
O4B C1B FAD sing 119 n n 
C3B O3B FAD sing 120 n n 
C3B C2B FAD sing 121 n n 
C3B H3B FAD sing 122 n n 
O3B HO3A FAD sing 123 n n 
C2B O2B FAD sing 124 n n 
C2B C1B FAD sing 125 n n 
C2B H2B FAD sing 126 n n 
O2B HO2A FAD sing 127 n n 
C1B N9A FAD sing 128 n n 
C1B H1B FAD sing 129 n n 
N9A C8A FAD sing 130 n y 
N9A C4A FAD sing 131 n y 
C8A N7A FAD doub 132 n y 
C8A H8A FAD sing 133 n n 
N7A C5A FAD sing 134 n y 
C5A C6A FAD sing 135 n y 
C5A C4A FAD doub 136 n y 
C6A N6A FAD sing 137 n n 
C6A N1A FAD doub 138 n y 
N6A H61A FAD sing 139 n n 
N6A H62A FAD sing 140 n n 
N1A C2A FAD sing 141 n y 
C2A N3A FAD doub 142 n y 
C2A H2A FAD sing 143 n n 
N3A C4A FAD sing 144 n y 
N1 C2 FAD sing 145 n n 
N1 C10 FAD doub 146 n n 
C2 O2 FAD doub 147 n n 
C2 N3 FAD sing 148 n n 
N3 C4 FAD sing 149 n n 
N3 HN3 FAD sing 150 n n 
C4 O4 FAD doub 151 n n 
C4 C4X FAD sing 152 n n 
C4X N5 FAD doub 153 n n 
C4X C10 FAD sing 154 n n 
N5 C5X FAD sing 155 n n 
C5X C6 FAD doub 156 n y 
C5X C9A FAD sing 157 n y 
C6 C7 FAD sing 158 n y 
C6 H6 FAD sing 159 n n 
C7 C7M FAD sing 160 n n 
C7 C8 FAD doub 161 n y 
C7M HM71 FAD sing 162 n n 
C7M HM72 FAD sing 163 n n 
C7M HM73 FAD sing 164 n n 
C8 C8M FAD sing 165 n n 
C8 C9 FAD sing 166 n y 
C8M HM81 FAD sing 167 n n 
C8M HM82 FAD sing 168 n n 
C8M HM83 FAD sing 169 n n 
C9 C9A FAD doub 170 n y 
C9 H9 FAD sing 171 n n 
C9A N10 FAD sing 172 n n 
N10 C10 FAD sing 173 n n 
N10 C1' FAD sing 174 n n 
C1' C2' FAD sing 175 n n 
C1' "H1'1" FAD sing 176 n n 
C1' "H1'2" FAD sing 177 n n 
C2' O2' FAD sing 178 n n 
C2' C3' FAD sing 179 n n 
C2' H2' FAD sing 180 n n 
O2' HO2' FAD sing 181 n n 
C3' O3' FAD sing 182 n n 
C3' C4' FAD sing 183 n n 
C3' H3' FAD sing 184 n n 
O3' HO3' FAD sing 185 n n 
C4' O4' FAD sing 186 n n 
C4' C5' FAD sing 187 n n 
C4' H4' FAD sing 188 n n 
O4' HO4' FAD sing 189 n n 
C5' O5' FAD sing 190 n n 
C5' "H5'1" FAD sing 191 n n 
C5' "H5'2" FAD sing 192 n n 
O5' P FAD sing 193 n n 
P O1P FAD doub 194 n n 
P O2P FAD sing 195 n n 
P O3P FAD sing 196 n n 
O2P HOP2 FAD sing 197 n n 
#
_atom_sites.entry_id                     2VAO 
_atom_sites.fract_transf_matrix[1][1]    0.007789 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007789 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007681 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 600 600 FAD FAD . 
D 3 EUG A 1 601 601 EUG EUG . 
E 2 FAD B 1 600 600 FAD FAD . 
F 3 EUG B 1 601 601 EUG EUG . 
G 4 HOH A 1 602 1 HOH HOH . 
G 4 HOH A 2 603 3 HOH HOH . 
G 4 HOH A 3 604 4 HOH HOH . 
G 4 HOH A 4 605 6 HOH HOH . 
G 4 HOH A 5 606 9 HOH HOH . 
G 4 HOH A 6 607 14 HOH HOH . 
G 4 HOH A 7 608 16 HOH HOH . 
G 4 HOH A 8 609 18 HOH HOH . 
G 4 HOH A 9 610 19 HOH HOH . 
G 4 HOH A 10 611 20 HOH HOH . 
G 4 HOH A 11 612 27 HOH HOH . 
G 4 HOH A 12 613 31 HOH HOH . 
G 4 HOH A 13 614 37 HOH HOH . 
G 4 HOH A 14 615 38 HOH HOH . 
H 4 HOH B 1 602 2 HOH HOH . 
H 4 HOH B 2 603 5 HOH HOH . 
H 4 HOH B 3 604 7 HOH HOH . 
H 4 HOH B 4 605 8 HOH HOH . 
H 4 HOH B 5 606 10 HOH HOH . 
H 4 HOH B 6 607 11 HOH HOH . 
H 4 HOH B 7 608 12 HOH HOH . 
H 4 HOH B 8 609 13 HOH HOH . 
H 4 HOH B 9 610 15 HOH HOH . 
H 4 HOH B 10 611 17 HOH HOH . 
H 4 HOH B 11 612 21 HOH HOH . 
H 4 HOH B 12 613 22 HOH HOH . 
H 4 HOH B 13 614 23 HOH HOH . 
H 4 HOH B 14 615 24 HOH HOH . 
H 4 HOH B 15 616 25 HOH HOH . 
H 4 HOH B 16 617 26 HOH HOH . 
H 4 HOH B 17 618 28 HOH HOH . 
H 4 HOH B 18 619 29 HOH HOH . 
H 4 HOH B 19 620 30 HOH HOH . 
H 4 HOH B 20 621 32 HOH HOH . 
H 4 HOH B 21 622 33 HOH HOH . 
H 4 HOH B 22 623 34 HOH HOH . 
H 4 HOH B 23 624 35 HOH HOH . 
H 4 HOH B 24 625 36 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . E 2 89.101 36.828 36.165 1 26.22 ? PA FAD 600 B 1 
HETATM 2 O O1A FAD . . . E 2 88.23 35.879 35.417 1 28.48 ? O1A FAD 600 B 1 
HETATM 3 O O2A FAD . . . E 2 89.548 38.088 35.511 1 26.19 ? O2A FAD 600 B 1 
HETATM 4 O O5B FAD . . . E 2 88.364 37.184 37.539 1 24.11 ? O5B FAD 600 B 1 
HETATM 5 C C5B FAD . . . E 2 88.743 37.472 38.803 1 24.61 ? C5B FAD 600 B 1 
HETATM 6 C C4B FAD . . . E 2 87.468 37.679 39.584 1 26.51 ? C4B FAD 600 B 1 
HETATM 7 O O4B FAD . . . E 2 87.834 38.513 40.703 1 26.44 ? O4B FAD 600 B 1 
HETATM 8 C C3B FAD . . . E 2 86.42 38.468 38.786 1 28.79 ? C3B FAD 600 B 1 
HETATM 9 O O3B FAD . . . E 2 85.276 37.669 38.583 1 30.05 ? O3B FAD 600 B 1 
HETATM 10 C C2B FAD . . . E 2 86.042 39.607 39.723 1 29.35 ? C2B FAD 600 B 1 
HETATM 11 O O2B FAD . . . E 2 84.969 39.263 40.581 1 31.54 ? O2B FAD 600 B 1 
HETATM 12 C C1B FAD . . . E 2 87.308 39.809 40.532 1 26.24 ? C1B FAD 600 B 1 
HETATM 13 N N9A FAD . . . E 2 88.227 40.684 39.809 1 25.93 ? N9A FAD 600 B 1 
HETATM 14 C C8A FAD . . . E 2 89.075 40.368 38.786 1 25.86 ? C8A FAD 600 B 1 
HETATM 15 N N7A FAD . . . E 2 89.745 41.4 38.326 1 26.44 ? N7A FAD 600 B 1 
HETATM 16 C C5A FAD . . . E 2 89.292 42.465 39.087 1 28.46 ? C5A FAD 600 B 1 
HETATM 17 C C6A FAD . . . E 2 89.608 43.84 39.091 1 27.09 ? C6A FAD 600 B 1 
HETATM 18 N N6A FAD . . . E 2 90.503 44.404 38.271 1 28.15 ? N6A FAD 600 B 1 
HETATM 19 N N1A FAD . . . E 2 88.972 44.622 39.985 1 31.46 ? N1A FAD 600 B 1 
HETATM 20 C C2A FAD . . . E 2 88.08 44.061 40.809 1 32.25 ? C2A FAD 600 B 1 
HETATM 21 N N3A FAD . . . E 2 87.697 42.788 40.897 1 31.44 ? N3A FAD 600 B 1 
HETATM 22 C C4A FAD . . . E 2 88.348 42.038 39.999 1 30.17 ? C4A FAD 600 B 1 
HETATM 23 N N1 FAD . . . E 2 92.299 28.645 40.472 1 14.75 ? N1 FAD 600 B 1 
HETATM 24 C C2 FAD . . . E 2 93.169 28.73 41.46 1 14.85 ? C2 FAD 600 B 1 
HETATM 25 O O2 FAD . . . E 2 93.106 29.674 42.241 1 15.35 ? O2 FAD 600 B 1 
HETATM 26 N N3 FAD . . . E 2 94.164 27.778 41.647 1 15.17 ? N3 FAD 600 B 1 
HETATM 27 C C4 FAD . . . E 2 94.286 26.682 40.802 1 14.94 ? C4 FAD 600 B 1 
HETATM 28 O O4 FAD . . . E 2 95.172 25.844 40.978 1 11.2 ? O4 FAD 600 B 1 
HETATM 29 C C4X FAD . . . E 2 93.332 26.606 39.732 1 17.32 ? C4X FAD 600 B 1 
HETATM 30 N N5 FAD . . . E 2 93.374 25.551 38.902 1 17.81 ? N5 FAD 600 B 1 
HETATM 31 C C5X FAD . . . E 2 92.406 25.441 37.98 1 16.37 ? C5X FAD 600 B 1 
HETATM 32 C C6 FAD . . . E 2 92.518 24.367 37.101 1 16.61 ? C6 FAD 600 B 1 
HETATM 33 C C7 FAD . . . E 2 91.641 24.255 36.024 1 17.57 ? C7 FAD 600 B 1 
HETATM 34 C C7M FAD . . . E 2 91.782 23.103 35.058 1 18.81 ? C7M FAD 600 B 1 
HETATM 35 C C8 FAD . . . E 2 90.625 25.241 35.836 1 17.1 ? C8 FAD 600 B 1 
HETATM 36 C C8M FAD . . . E 2 89.675 25.126 34.668 1 16.13 ? C8M FAD 600 B 1 
HETATM 37 C C9 FAD . . . E 2 90.505 26.311 36.736 1 16.85 ? C9 FAD 600 B 1 
HETATM 38 C C9A FAD . . . E 2 91.384 26.422 37.82 1 16.62 ? C9A FAD 600 B 1 
HETATM 39 N N10 FAD . . . E 2 91.364 27.492 38.677 1 17.12 ? N10 FAD 600 B 1 
HETATM 40 C C10 FAD . . . E 2 92.339 27.614 39.618 1 15.78 ? C10 FAD 600 B 1 
HETATM 41 C C1' FAD . . . E 2 90.36 28.569 38.549 1 18.03 ? C1' FAD 600 B 1 
HETATM 42 C C2' FAD . . . E 2 90.856 29.69 37.627 1 18.51 ? C2' FAD 600 B 1 
HETATM 43 O O2' FAD . . . E 2 91.276 29.146 36.378 1 19.08 ? O2' FAD 600 B 1 
HETATM 44 C C3' FAD . . . E 2 92.001 30.521 38.206 1 17.81 ? C3' FAD 600 B 1 
HETATM 45 O O3' FAD . . . E 2 91.812 30.7 39.605 1 17.58 ? O3' FAD 600 B 1 
HETATM 46 C C4' FAD . . . E 2 92.111 31.874 37.501 1 18.18 ? C4' FAD 600 B 1 
HETATM 47 O O4' FAD . . . E 2 93.298 32.544 37.915 1 19.46 ? O4' FAD 600 B 1 
HETATM 48 C C5' FAD . . . E 2 90.906 32.77 37.773 1 18.84 ? C5' FAD 600 B 1 
HETATM 49 O O5' FAD . . . E 2 90.589 33.563 36.637 1 20.64 ? O5' FAD 600 B 1 
HETATM 50 P P FAD . . . E 2 91.369 34.9 36.188 1 22.41 ? P FAD 600 B 1 
HETATM 51 O O1P FAD . . . E 2 92.653 34.951 36.936 1 22.82 ? O1P FAD 600 B 1 
HETATM 52 O O2P FAD . . . E 2 91.373 34.991 34.7 1 21.45 ? O2P FAD 600 B 1 
HETATM 53 O O3P FAD . . . E 2 90.387 36.049 36.787 1 23.29 ? O3P FAD 600 B 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    214 
_model_server_stats.query_time_ms           389 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           53 
#