data_2VAO # _model_server_result.job_id RYGee2pEpAPm_KGlGEdP1A _model_server_result.datetime_utc '2024-10-12 14:35:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2vao # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 2VAO # _exptl.entry_id 2VAO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 164.201 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-methoxy-4-[(1E)-prop-1-en-1-yl]phenol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2VAO _cell.length_a 128.38 _cell.length_b 128.38 _cell.length_c 130.19 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VAO _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 128.38 0 0 3 'crystal symmetry operation' 4_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 128.38 0 4 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 128.38 128.38 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NE2 HIS 422 A HIS 422 1_555 C C8M FAD . A FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.727 ? covale ? covale2 B NE2 HIS 422 B HIS 422 1_555 E C8M FAD . B FAD 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.726 ? # _chem_comp.formula 'C10 H12 O2' _chem_comp.formula_weight 164.201 _chem_comp.id EUG _chem_comp.mon_nstd_flag . _chem_comp.name 2-methoxy-4-[(1E)-prop-1-en-1-yl]phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Isoeugenol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 EUG doub 83 n y C1 C6 EUG sing 84 n y C1 C7 EUG sing 85 n n C2 C3 EUG sing 86 n y C3 C4 EUG doub 87 n y C3 O3 EUG sing 88 n n C4 C5 EUG sing 89 n y C4 O4 EUG sing 90 n n C5 C6 EUG doub 91 n y C7 C8 EUG doub 92 n n C9 O3 EUG sing 93 n n C8 C10 EUG sing 94 n n C2 H2 EUG sing 95 e n C5 H5 EUG sing 96 n n C6 H6 EUG sing 97 n n C7 H7 EUG sing 98 n n C8 H81 EUG sing 99 n n C9 H91 EUG sing 100 n n C9 H92 EUG sing 101 n n C9 H93 EUG sing 102 n n O4 HO4 EUG sing 103 n n C10 H10 EUG sing 104 n n C10 H11 EUG sing 105 n n C10 H12 EUG sing 106 n n # _atom_sites.entry_id 2VAO _atom_sites.fract_transf_matrix[1][1] 0.007789 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007789 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007681 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 600 600 FAD FAD . D 3 EUG A 1 601 601 EUG EUG . E 2 FAD B 1 600 600 FAD FAD . F 3 EUG B 1 601 601 EUG EUG . G 4 HOH A 1 602 1 HOH HOH . G 4 HOH A 2 603 3 HOH HOH . G 4 HOH A 3 604 4 HOH HOH . G 4 HOH A 4 605 6 HOH HOH . G 4 HOH A 5 606 9 HOH HOH . G 4 HOH A 6 607 14 HOH HOH . G 4 HOH A 7 608 16 HOH HOH . G 4 HOH A 8 609 18 HOH HOH . G 4 HOH A 9 610 19 HOH HOH . G 4 HOH A 10 611 20 HOH HOH . G 4 HOH A 11 612 27 HOH HOH . G 4 HOH A 12 613 31 HOH HOH . G 4 HOH A 13 614 37 HOH HOH . G 4 HOH A 14 615 38 HOH HOH . H 4 HOH B 1 602 2 HOH HOH . H 4 HOH B 2 603 5 HOH HOH . H 4 HOH B 3 604 7 HOH HOH . H 4 HOH B 4 605 8 HOH HOH . H 4 HOH B 5 606 10 HOH HOH . H 4 HOH B 6 607 11 HOH HOH . H 4 HOH B 7 608 12 HOH HOH . H 4 HOH B 8 609 13 HOH HOH . H 4 HOH B 9 610 15 HOH HOH . H 4 HOH B 10 611 17 HOH HOH . H 4 HOH B 11 612 21 HOH HOH . H 4 HOH B 12 613 22 HOH HOH . H 4 HOH B 13 614 23 HOH HOH . H 4 HOH B 14 615 24 HOH HOH . H 4 HOH B 15 616 25 HOH HOH . H 4 HOH B 16 617 26 HOH HOH . H 4 HOH B 17 618 28 HOH HOH . H 4 HOH B 18 619 29 HOH HOH . H 4 HOH B 19 620 30 HOH HOH . H 4 HOH B 20 621 32 HOH HOH . H 4 HOH B 21 622 33 HOH HOH . H 4 HOH B 22 623 34 HOH HOH . H 4 HOH B 23 624 35 HOH HOH . H 4 HOH B 24 625 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EUG . . . D 3 108.603 47.373 70.711 1 28.66 ? C1 EUG 601 A 1 HETATM 2 C C2 EUG . . . D 3 108.498 46.402 69.711 1 28.34 ? C2 EUG 601 A 1 HETATM 3 C C3 EUG . . . D 3 107.538 46.513 68.706 1 29.86 ? C3 EUG 601 A 1 HETATM 4 C C4 EUG . . . D 3 106.673 47.61 68.731 1 28.1 ? C4 EUG 601 A 1 HETATM 5 C C5 EUG . . . D 3 106.776 48.567 69.73 1 28.02 ? C5 EUG 601 A 1 HETATM 6 C C6 EUG . . . D 3 107.727 48.441 70.727 1 28.4 ? C6 EUG 601 A 1 HETATM 7 C C7 EUG . . . D 3 109.608 47.271 71.768 1 33.12 ? C7 EUG 601 A 1 HETATM 8 C C8 EUG . . . D 3 110.841 47.572 71.461 1 35.37 ? C8 EUG 601 A 1 HETATM 9 C C9 EUG . . . D 3 107.863 45.883 66.406 1 30.96 ? C9 EUG 601 A 1 HETATM 10 O O3 EUG . . . D 3 107.447 45.586 67.708 1 31.91 ? O3 EUG 601 A 1 HETATM 11 O O4 EUG . . . D 3 105.747 47.783 67.768 1 27.8 ? O4 EUG 601 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 11 #