data_2VB2
#
_model_server_result.job_id            dG7BYPEYyfpzxnbFt2zNlQ 
_model_server_result.datetime_utc      '2025-08-31 02:48:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2vb2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1088}' 
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_entry.id    2VB2 
#
_exptl.entry_id    2VB2 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2VB2 
_cell.length_a            38.468 
_cell.length_b            41.264 
_cell.length_c            44.573 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 2VB2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
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_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
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_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 36 X HIS 36 1_555 C CU CU . X CU 1089 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? 
metalc ? metalc2 A SD MET 47 X MET 47 1_555 C CU CU . X CU 1089 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc3 A SD MET 49 X MET 49 1_555 C CU CU . X CU 1089 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 277 n n 
S O2 SO4 doub 278 n n 
S O3 SO4 sing 279 n n 
S O4 SO4 sing 280 n n 
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_atom_sites.entry_id                     2VB2 
_atom_sites.fract_transf_matrix[1][1]    0.025996 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024234 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022435 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 X 1 1088 1088 SO4 SO4 . 
C 3 CU X 1 1089 1089 CU CU . 
D 4 HOH X 1 2001 2001 HOH HOH . 
D 4 HOH X 2 2002 2002 HOH HOH . 
D 4 HOH X 3 2003 2003 HOH HOH . 
D 4 HOH X 4 2004 2004 HOH HOH . 
D 4 HOH X 5 2005 2005 HOH HOH . 
D 4 HOH X 6 2006 2006 HOH HOH . 
D 4 HOH X 7 2007 2007 HOH HOH . 
D 4 HOH X 8 2008 2008 HOH HOH . 
D 4 HOH X 9 2009 2009 HOH HOH . 
D 4 HOH X 10 2010 2010 HOH HOH . 
D 4 HOH X 11 2011 2011 HOH HOH . 
D 4 HOH X 12 2012 2012 HOH HOH . 
D 4 HOH X 13 2013 2013 HOH HOH . 
D 4 HOH X 14 2014 2014 HOH HOH . 
D 4 HOH X 15 2015 2015 HOH HOH . 
D 4 HOH X 16 2016 2016 HOH HOH . 
D 4 HOH X 17 2017 2017 HOH HOH . 
D 4 HOH X 18 2018 2018 HOH HOH . 
D 4 HOH X 19 2019 2019 HOH HOH . 
D 4 HOH X 20 2020 2020 HOH HOH . 
D 4 HOH X 21 2021 2021 HOH HOH . 
D 4 HOH X 22 2022 2022 HOH HOH . 
D 4 HOH X 23 2023 2023 HOH HOH . 
D 4 HOH X 24 2024 2024 HOH HOH . 
D 4 HOH X 25 2025 2025 HOH HOH . 
D 4 HOH X 26 2026 2026 HOH HOH . 
D 4 HOH X 27 2027 2027 HOH HOH . 
D 4 HOH X 28 2028 2028 HOH HOH . 
D 4 HOH X 29 2029 2029 HOH HOH . 
D 4 HOH X 30 2030 2030 HOH HOH . 
D 4 HOH X 31 2031 2031 HOH HOH . 
D 4 HOH X 32 2032 2032 HOH HOH . 
D 4 HOH X 33 2033 2033 HOH HOH . 
D 4 HOH X 34 2034 2034 HOH HOH . 
D 4 HOH X 35 2035 2035 HOH HOH . 
D 4 HOH X 36 2036 2036 HOH HOH . 
D 4 HOH X 37 2037 2037 HOH HOH . 
D 4 HOH X 38 2038 2038 HOH HOH . 
D 4 HOH X 39 2039 2039 HOH HOH . 
D 4 HOH X 40 2040 2040 HOH HOH . 
D 4 HOH X 41 2041 2041 HOH HOH . 
D 4 HOH X 42 2042 2042 HOH HOH . 
D 4 HOH X 43 2043 2043 HOH HOH . 
D 4 HOH X 44 2044 2044 HOH HOH . 
D 4 HOH X 45 2045 2045 HOH HOH . 
D 4 HOH X 46 2046 2046 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . B 2 11.696 5.798 -6.451 1 47.78 ? S SO4 1088 X 1 
HETATM 2 O O1 SO4 . . . B 2 12.343 5.228 -7.628 1 47.71 ? O1 SO4 1088 X 1 
HETATM 3 O O2 SO4 . . . B 2 10.443 5.093 -6.176 1 47.46 ? O2 SO4 1088 X 1 
HETATM 4 O O3 SO4 . . . B 2 12.577 5.668 -5.293 1 49.16 ? O3 SO4 1088 X 1 
HETATM 5 O O4 SO4 . . . B 2 11.438 7.214 -6.694 1 49.48 ? O4 SO4 1088 X 1 
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_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           432 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           5 
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