data_2VBX # _model_server_result.job_id IaYVxTEzY0ttavCxbH9yPQ _model_server_result.datetime_utc '2024-11-16 21:29:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2vbx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1151}' # _entry.id 2VBX # _exptl.entry_id 2VBX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.162 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HISTIDINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2VBX _cell.length_a 100.899 _cell.length_b 100.899 _cell.length_c 99.286 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VBX _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C6 H10 N3 O2 1' _chem_comp.formula_weight 156.162 _chem_comp.id HIS _chem_comp.mon_nstd_flag y _chem_comp.name HISTIDINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA HIS sing 129 n n N H HIS sing 130 n n N H2 HIS sing 131 n n CA C HIS sing 132 n n CA CB HIS sing 133 n n CA HA HIS sing 134 n n C O HIS doub 135 n n C OXT HIS sing 136 n n CB CG HIS sing 137 n n CB HB2 HIS sing 138 n n CB HB3 HIS sing 139 n n CG ND1 HIS sing 140 n y CG CD2 HIS doub 141 n y ND1 CE1 HIS doub 142 n y ND1 HD1 HIS sing 143 n n CD2 NE2 HIS sing 144 n y CD2 HD2 HIS sing 145 n n CE1 NE2 HIS sing 146 n y CE1 HE1 HIS sing 147 n n NE2 HE2 HIS sing 148 n n OXT HXT HIS sing 149 n n # _atom_sites.entry_id 2VBX _atom_sites.fract_transf_matrix[1][1] 0.009911 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009911 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010072 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HIS A 1 1151 1151 HIS HIS . D 2 HIS A 1 1152 1152 HIS HIS . E 3 HOH A 1 2001 2001 HOH HOH . E 3 HOH A 2 2002 2002 HOH HOH . E 3 HOH A 3 2003 2003 HOH HOH . E 3 HOH A 4 2004 2004 HOH HOH . E 3 HOH A 5 2005 2005 HOH HOH . E 3 HOH A 6 2006 2006 HOH HOH . E 3 HOH A 7 2007 2007 HOH HOH . E 3 HOH A 8 2008 2008 HOH HOH . E 3 HOH A 9 2009 2009 HOH HOH . E 3 HOH A 10 2010 2010 HOH HOH . E 3 HOH A 11 2011 2011 HOH HOH . E 3 HOH A 12 2012 2012 HOH HOH . E 3 HOH A 13 2013 2013 HOH HOH . E 3 HOH A 14 2014 2014 HOH HOH . E 3 HOH A 15 2015 2015 HOH HOH . E 3 HOH A 16 2016 2016 HOH HOH . F 3 HOH B 1 2001 2001 HOH HOH . F 3 HOH B 2 2002 2002 HOH HOH . F 3 HOH B 3 2003 2003 HOH HOH . F 3 HOH B 4 2004 2004 HOH HOH . F 3 HOH B 5 2005 2005 HOH HOH . F 3 HOH B 6 2006 2006 HOH HOH . F 3 HOH B 7 2007 2007 HOH HOH . F 3 HOH B 8 2008 2008 HOH HOH . F 3 HOH B 9 2009 2009 HOH HOH . F 3 HOH B 10 2010 2010 HOH HOH . F 3 HOH B 11 2011 2011 HOH HOH . F 3 HOH B 12 2012 2012 HOH HOH . F 3 HOH B 13 2013 2013 HOH HOH . F 3 HOH B 14 2014 2014 HOH HOH . F 3 HOH B 15 2015 2015 HOH HOH . F 3 HOH B 16 2016 2016 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N HIS . . . C 2 2.224 14.959 0.834 1 52.52 ? N HIS 1151 A 1 HETATM 2 C CA HIS . . . C 2 2.839 15.692 -0.292 1 52.92 ? CA HIS 1151 A 1 HETATM 3 C C HIS . . . C 2 3.811 14.821 -1.141 1 52.17 ? C HIS 1151 A 1 HETATM 4 O O HIS . . . C 2 4.338 13.809 -0.716 1 51.62 ? O HIS 1151 A 1 HETATM 5 C CB HIS . . . C 2 3.583 16.924 0.252 1 53.87 ? CB HIS 1151 A 1 HETATM 6 C CG HIS . . . C 2 2.863 17.644 1.341 1 56.45 ? CG HIS 1151 A 1 HETATM 7 N ND1 HIS . . . C 2 1.5 17.882 1.305 1 59.97 ? ND1 HIS 1151 A 1 HETATM 8 C CD2 HIS . . . C 2 3.314 18.181 2.498 1 58.7 ? CD2 HIS 1151 A 1 HETATM 9 C CE1 HIS . . . C 2 1.142 18.53 2.399 1 59.46 ? CE1 HIS 1151 A 1 HETATM 10 N NE2 HIS . . . C 2 2.223 18.723 3.137 1 61.55 ? NE2 HIS 1151 A 1 HETATM 11 O OXT HIS . . . C 2 4.153 15.097 -2.29 1 51.57 ? OXT HIS 1151 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #