data_2VCW # _model_server_result.job_id Xg8M7SmnmGXnKBVLlbbuqQ _model_server_result.datetime_utc '2024-11-16 22:32:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2vcw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1200}' # _entry.id 2VCW # _exptl.entry_id 2VCW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2VCW _cell.length_a 123.858 _cell.length_b 123.858 _cell.length_c 106.62 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VCW _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dimeric 2 author_and_software_defined_assembly 1 PQS dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,I,J 1 1 C,D,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 H N N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 129 n n N1 HN11 GSH sing 130 n n N1 HN12 GSH sing 131 n n CA1 C1 GSH sing 132 n n CA1 CB1 GSH sing 133 n n CA1 HA1 GSH sing 134 n n C1 O11 GSH doub 135 n n C1 O12 GSH sing 136 n n O12 H12 GSH sing 137 n n CB1 CG1 GSH sing 138 n n CB1 HB12 GSH sing 139 n n CB1 HB13 GSH sing 140 n n CG1 CD1 GSH sing 141 n n CG1 HG12 GSH sing 142 n n CG1 HG13 GSH sing 143 n n CD1 OE1 GSH doub 144 n n CD1 N2 GSH sing 145 n n N2 CA2 GSH sing 146 n n N2 HN2 GSH sing 147 n n CA2 C2 GSH sing 148 n n CA2 CB2 GSH sing 149 n n CA2 HA2 GSH sing 150 n n C2 O2 GSH doub 151 n n C2 N3 GSH sing 152 n n CB2 SG2 GSH sing 153 n n CB2 HB22 GSH sing 154 n n CB2 HB23 GSH sing 155 n n SG2 HSG GSH sing 156 n n N3 CA3 GSH sing 157 n n N3 HN3 GSH sing 158 n n CA3 C3 GSH sing 159 n n CA3 HA31 GSH sing 160 n n CA3 HA32 GSH sing 161 n n C3 O31 GSH doub 162 n n C3 O32 GSH sing 163 n n O32 H32 GSH sing 164 n n # _atom_sites.entry_id 2VCW _atom_sites.fract_transf_matrix[1][1] 0.008074 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008074 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009379 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GSH A 1 1200 1200 GSH GSH . F 2 GSH B 1 1200 1200 GSH GSH . G 3 ZZA B 1 1201 1201 ZZA ZZA . H 2 GSH D 1 1200 1200 GSH GSH . I 4 HOH A 1 2001 2001 HOH HOH . I 4 HOH A 2 2002 2002 HOH HOH . I 4 HOH A 3 2003 2003 HOH HOH . I 4 HOH A 4 2004 2004 HOH HOH . I 4 HOH A 5 2005 2005 HOH HOH . I 4 HOH A 6 2006 2006 HOH HOH . I 4 HOH A 7 2007 2007 HOH HOH . I 4 HOH A 8 2008 2008 HOH HOH . I 4 HOH A 9 2009 2009 HOH HOH . I 4 HOH A 10 2010 2010 HOH HOH . I 4 HOH A 11 2011 2011 HOH HOH . I 4 HOH A 12 2012 2012 HOH HOH . I 4 HOH A 13 2013 2013 HOH HOH . I 4 HOH A 14 2014 2014 HOH HOH . I 4 HOH A 15 2015 2015 HOH HOH . I 4 HOH A 16 2016 2016 HOH HOH . I 4 HOH A 17 2017 2017 HOH HOH . I 4 HOH A 18 2018 2018 HOH HOH . I 4 HOH A 19 2019 2019 HOH HOH . I 4 HOH A 20 2020 2020 HOH HOH . I 4 HOH A 21 2021 2021 HOH HOH . I 4 HOH A 22 2022 2022 HOH HOH . I 4 HOH A 23 2023 2023 HOH HOH . I 4 HOH A 24 2024 2024 HOH HOH . I 4 HOH A 25 2025 2025 HOH HOH . I 4 HOH A 26 2026 2026 HOH HOH . I 4 HOH A 27 2027 2027 HOH HOH . I 4 HOH A 28 2028 2028 HOH HOH . I 4 HOH A 29 2029 2029 HOH HOH . I 4 HOH A 30 2030 2030 HOH HOH . I 4 HOH A 31 2031 2031 HOH HOH . I 4 HOH A 32 2032 2032 HOH HOH . I 4 HOH A 33 2033 2033 HOH HOH . I 4 HOH A 34 2034 2034 HOH HOH . I 4 HOH A 35 2035 2035 HOH HOH . I 4 HOH A 36 2036 2036 HOH HOH . I 4 HOH A 37 2037 2037 HOH HOH . I 4 HOH A 38 2038 2038 HOH HOH . I 4 HOH A 39 2039 2039 HOH HOH . I 4 HOH A 40 2040 2040 HOH HOH . I 4 HOH A 41 2041 2041 HOH HOH . I 4 HOH A 42 2042 2042 HOH HOH . I 4 HOH A 43 2043 2043 HOH HOH . I 4 HOH A 44 2044 2044 HOH HOH . I 4 HOH A 45 2045 2045 HOH HOH . I 4 HOH A 46 2046 2046 HOH HOH . I 4 HOH A 47 2047 2047 HOH HOH . I 4 HOH A 48 2048 2048 HOH HOH . I 4 HOH A 49 2049 2049 HOH HOH . I 4 HOH A 50 2050 2050 HOH HOH . I 4 HOH A 51 2051 2051 HOH HOH . I 4 HOH A 52 2052 2052 HOH HOH . I 4 HOH A 53 2053 2053 HOH HOH . I 4 HOH A 54 2054 2054 HOH HOH . I 4 HOH A 55 2055 2055 HOH HOH . I 4 HOH A 56 2056 2056 HOH HOH . I 4 HOH A 57 2057 2057 HOH HOH . I 4 HOH A 58 2058 2058 HOH HOH . I 4 HOH A 59 2059 2059 HOH HOH . I 4 HOH A 60 2060 2060 HOH HOH . I 4 HOH A 61 2061 2061 HOH HOH . I 4 HOH A 62 2062 2062 HOH HOH . I 4 HOH A 63 2063 2063 HOH HOH . I 4 HOH A 64 2064 2064 HOH HOH . I 4 HOH A 65 2065 2065 HOH HOH . I 4 HOH A 66 2066 2066 HOH HOH . I 4 HOH A 67 2067 2067 HOH HOH . I 4 HOH A 68 2068 2068 HOH HOH . I 4 HOH A 69 2069 2069 HOH HOH . J 4 HOH B 1 2001 2001 HOH HOH . J 4 HOH B 2 2002 2002 HOH HOH . J 4 HOH B 3 2003 2003 HOH HOH . J 4 HOH B 4 2004 2004 HOH HOH . J 4 HOH B 5 2005 2005 HOH HOH . J 4 HOH B 6 2006 2006 HOH HOH . J 4 HOH B 7 2007 2007 HOH HOH . J 4 HOH B 8 2008 2008 HOH HOH . J 4 HOH B 9 2009 2009 HOH HOH . J 4 HOH B 10 2010 2010 HOH HOH . J 4 HOH B 11 2011 2011 HOH HOH . J 4 HOH B 12 2012 2012 HOH HOH . J 4 HOH B 13 2013 2013 HOH HOH . J 4 HOH B 14 2014 2014 HOH HOH . J 4 HOH B 15 2015 2015 HOH HOH . J 4 HOH B 16 2016 2016 HOH HOH . J 4 HOH B 17 2017 2017 HOH HOH . J 4 HOH B 18 2018 2018 HOH HOH . J 4 HOH B 19 2019 2019 HOH HOH . J 4 HOH B 20 2020 2020 HOH HOH . J 4 HOH B 21 2021 2021 HOH HOH . J 4 HOH B 22 2022 2022 HOH HOH . J 4 HOH B 23 2023 2023 HOH HOH . J 4 HOH B 24 2024 2024 HOH HOH . J 4 HOH B 25 2025 2025 HOH HOH . J 4 HOH B 26 2026 2026 HOH HOH . J 4 HOH B 27 2027 2027 HOH HOH . J 4 HOH B 28 2028 2028 HOH HOH . J 4 HOH B 29 2029 2029 HOH HOH . J 4 HOH B 30 2030 2030 HOH HOH . J 4 HOH B 31 2031 2031 HOH HOH . J 4 HOH B 32 2032 2032 HOH HOH . J 4 HOH B 33 2033 2033 HOH HOH . J 4 HOH B 34 2034 2034 HOH HOH . J 4 HOH B 35 2035 2035 HOH HOH . J 4 HOH B 36 2036 2036 HOH HOH . J 4 HOH B 37 2037 2037 HOH HOH . J 4 HOH B 38 2038 2038 HOH HOH . J 4 HOH B 39 2039 2039 HOH HOH . J 4 HOH B 40 2040 2040 HOH HOH . J 4 HOH B 41 2041 2041 HOH HOH . J 4 HOH B 42 2042 2042 HOH HOH . J 4 HOH B 43 2043 2043 HOH HOH . J 4 HOH B 44 2044 2044 HOH HOH . J 4 HOH B 45 2045 2045 HOH HOH . J 4 HOH B 46 2046 2046 HOH HOH . J 4 HOH B 47 2047 2047 HOH HOH . J 4 HOH B 48 2048 2048 HOH HOH . J 4 HOH B 49 2049 2049 HOH HOH . J 4 HOH B 50 2050 2050 HOH HOH . J 4 HOH B 51 2051 2051 HOH HOH . J 4 HOH B 52 2052 2052 HOH HOH . J 4 HOH B 53 2053 2053 HOH HOH . J 4 HOH B 54 2054 2054 HOH HOH . J 4 HOH B 55 2055 2055 HOH HOH . J 4 HOH B 56 2056 2056 HOH HOH . J 4 HOH B 57 2057 2057 HOH HOH . J 4 HOH B 58 2058 2058 HOH HOH . J 4 HOH B 59 2059 2059 HOH HOH . J 4 HOH B 60 2060 2060 HOH HOH . J 4 HOH B 61 2061 2061 HOH HOH . J 4 HOH B 62 2062 2062 HOH HOH . J 4 HOH B 63 2063 2063 HOH HOH . J 4 HOH B 64 2064 2064 HOH HOH . J 4 HOH B 65 2065 2065 HOH HOH . J 4 HOH B 66 2066 2066 HOH HOH . J 4 HOH B 67 2067 2067 HOH HOH . K 4 HOH C 1 2001 2001 HOH HOH . K 4 HOH C 2 2002 2002 HOH HOH . K 4 HOH C 3 2003 2003 HOH HOH . K 4 HOH C 4 2004 2004 HOH HOH . K 4 HOH C 5 2005 2005 HOH HOH . K 4 HOH C 6 2006 2006 HOH HOH . K 4 HOH C 7 2007 2007 HOH HOH . K 4 HOH C 8 2008 2008 HOH HOH . K 4 HOH C 9 2009 2009 HOH HOH . K 4 HOH C 10 2010 2010 HOH HOH . K 4 HOH C 11 2011 2011 HOH HOH . K 4 HOH C 12 2012 2012 HOH HOH . K 4 HOH C 13 2013 2013 HOH HOH . K 4 HOH C 14 2014 2014 HOH HOH . K 4 HOH C 15 2015 2015 HOH HOH . K 4 HOH C 16 2016 2016 HOH HOH . K 4 HOH C 17 2017 2017 HOH HOH . K 4 HOH C 18 2018 2018 HOH HOH . K 4 HOH C 19 2019 2019 HOH HOH . K 4 HOH C 20 2020 2020 HOH HOH . K 4 HOH C 21 2021 2021 HOH HOH . K 4 HOH C 22 2022 2022 HOH HOH . K 4 HOH C 23 2023 2023 HOH HOH . K 4 HOH C 24 2024 2024 HOH HOH . L 4 HOH D 1 2001 2001 HOH HOH . L 4 HOH D 2 2002 2002 HOH HOH . L 4 HOH D 3 2003 2003 HOH HOH . L 4 HOH D 4 2004 2004 HOH HOH . L 4 HOH D 5 2005 2005 HOH HOH . L 4 HOH D 6 2006 2006 HOH HOH . L 4 HOH D 7 2007 2007 HOH HOH . L 4 HOH D 8 2008 2008 HOH HOH . L 4 HOH D 9 2009 2009 HOH HOH . L 4 HOH D 10 2010 2010 HOH HOH . L 4 HOH D 11 2011 2011 HOH HOH . L 4 HOH D 12 2012 2012 HOH HOH . L 4 HOH D 13 2013 2013 HOH HOH . L 4 HOH D 14 2014 2014 HOH HOH . L 4 HOH D 15 2015 2015 HOH HOH . L 4 HOH D 16 2016 2016 HOH HOH . L 4 HOH D 17 2017 2017 HOH HOH . L 4 HOH D 18 2018 2018 HOH HOH . L 4 HOH D 19 2019 2019 HOH HOH . L 4 HOH D 20 2020 2020 HOH HOH . L 4 HOH D 21 2021 2021 HOH HOH . L 4 HOH D 22 2022 2022 HOH HOH . L 4 HOH D 23 2023 2023 HOH HOH . L 4 HOH D 24 2024 2024 HOH HOH . L 4 HOH D 25 2025 2025 HOH HOH . L 4 HOH D 26 2026 2026 HOH HOH . L 4 HOH D 27 2027 2027 HOH HOH . L 4 HOH D 28 2028 2028 HOH HOH . L 4 HOH D 29 2029 2029 HOH HOH . L 4 HOH D 30 2030 2030 HOH HOH . L 4 HOH D 31 2031 2031 HOH HOH . L 4 HOH D 32 2032 2032 HOH HOH . L 4 HOH D 33 2033 2033 HOH HOH . L 4 HOH D 34 2034 2034 HOH HOH . L 4 HOH D 35 2035 2035 HOH HOH . L 4 HOH D 36 2036 2036 HOH HOH . L 4 HOH D 37 2037 2037 HOH HOH . L 4 HOH D 38 2038 2038 HOH HOH . L 4 HOH D 39 2039 2039 HOH HOH . L 4 HOH D 40 2040 2040 HOH HOH . L 4 HOH D 41 2041 2041 HOH HOH . L 4 HOH D 42 2042 2042 HOH HOH . L 4 HOH D 43 2043 2043 HOH HOH . L 4 HOH D 44 2044 2044 HOH HOH . L 4 HOH D 45 2045 2045 HOH HOH . L 4 HOH D 46 2046 2046 HOH HOH . L 4 HOH D 47 2047 2047 HOH HOH . L 4 HOH D 48 2048 2048 HOH HOH . L 4 HOH D 49 2049 2049 HOH HOH . L 4 HOH D 50 2050 2050 HOH HOH . L 4 HOH D 51 2051 2051 HOH HOH . L 4 HOH D 52 2052 2052 HOH HOH . L 4 HOH D 53 2053 2053 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . F 2 2.004 23.612 4.89 1 25.76 ? N1 GSH 1200 B 1 HETATM 2 C CA1 GSH . . . F 2 3.162 23.185 5.675 1 25.5 ? CA1 GSH 1200 B 1 HETATM 3 C C1 GSH . . . F 2 4.447 23.323 4.889 1 23.31 ? C1 GSH 1200 B 1 HETATM 4 O O11 GSH . . . F 2 5.564 23.311 5.479 1 20.02 ? O11 GSH 1200 B 1 HETATM 5 O O12 GSH . . . F 2 4.411 23.47 3.64 1 23.02 ? O12 GSH 1200 B 1 HETATM 6 C CB1 GSH . . . F 2 2.972 21.751 6.165 1 27.24 ? CB1 GSH 1200 B 1 HETATM 7 C CG1 GSH . . . F 2 3.867 21.44 7.365 1 30.45 ? CG1 GSH 1200 B 1 HETATM 8 C CD1 GSH . . . F 2 3.588 20.034 7.841 1 31.92 ? CD1 GSH 1200 B 1 HETATM 9 O OE1 GSH . . . F 2 2.255 19.639 8.058 1 32.05 ? OE1 GSH 1200 B 1 HETATM 10 N N2 GSH . . . F 2 4.629 19.219 8.029 1 32.36 ? N2 GSH 1200 B 1 HETATM 11 C CA2 GSH . . . F 2 4.439 17.899 8.613 1 33.24 ? CA2 GSH 1200 B 1 HETATM 12 C C2 GSH . . . F 2 4.642 17.913 10.094 1 33.5 ? C2 GSH 1200 B 1 HETATM 13 O O2 GSH . . . F 2 5.561 18.806 10.667 1 31.23 ? O2 GSH 1200 B 1 HETATM 14 C CB2 GSH . . . F 2 5.359 16.869 7.965 1 34.6 ? CB2 GSH 1200 B 1 HETATM 15 S SG2 GSH . . . F 2 5.332 17.021 6.16 1 33.98 ? SG2 GSH 1200 B 1 HETATM 16 N N3 GSH . . . F 2 3.902 17.052 10.787 1 35.16 ? N3 GSH 1200 B 1 HETATM 17 C CA3 GSH . . . F 2 4.274 16.548 12.094 1 36.41 ? CA3 GSH 1200 B 1 HETATM 18 C C3 GSH . . . F 2 3.378 17.147 13.159 1 37.65 ? C3 GSH 1200 B 1 HETATM 19 O O31 GSH . . . F 2 3.313 16.637 14.298 1 38 ? O31 GSH 1200 B 1 HETATM 20 O O32 GSH . . . F 2 2.691 18.166 12.908 1 38.15 ? O32 GSH 1200 B 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 20 #