data_2VDW # _model_server_result.job_id D6oCekE1BKlKgOoBa-LHxg _model_server_result.datetime_utc '2025-02-05 07:51:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2vdw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":1290}' # _entry.id 2VDW # _exptl.entry_id 2VDW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 94.22 _cell.angle_beta 92.95 _cell.angle_gamma 108.26 _cell.entry_id 2VDW _cell.length_a 60.89 _cell.length_b 61.02 _cell.length_c 225.78 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VDW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dimeric 2 software_defined_assembly 1 PQS dimeric 2 author_and_software_defined_assembly 2 PQS dimeric 2 author_and_software_defined_assembly 3 PQS dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J 1 1 C,D,K,L,M 2 1 E,F,N,O,P,Q 3 1 G,H,R,S,T,U,V,W 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 K N N ? 3 M N N ? 3 N N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 336 n n S O2 SO4 doub 337 n n S O3 SO4 sing 338 n n S O4 SO4 sing 339 n n # _atom_sites.entry_id 2VDW _atom_sites.fract_transf_matrix[1][1] 0.016423 _atom_sites.fract_transf_matrix[1][2] 0.005419 _atom_sites.fract_transf_matrix[1][3] 0.001365 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017257 _atom_sites.fract_transf_matrix[2][3] 0.00164 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004455 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 SO4 A 1 1845 1845 SO4 SO4 . J 4 SAH A 1 1846 1846 SAH SAH . K 3 SO4 C 1 1845 1845 SO4 SO4 . L 4 SAH C 1 1846 1846 SAH SAH . M 3 SO4 C 1 1847 1847 SO4 SO4 . N 3 SO4 E 1 1845 1845 SO4 SO4 . O 4 SAH E 1 1846 1846 SAH SAH . P 3 SO4 F 1 1288 1288 SO4 SO4 . Q 3 SO4 F 1 1289 1289 SO4 SO4 . R 3 SO4 G 1 1845 1845 SO4 SO4 . S 4 SAH G 1 1846 1846 SAH SAH . T 3 SO4 H 1 1288 1288 SO4 SO4 . U 3 SO4 H 1 1289 1289 SO4 SO4 . V 3 SO4 H 1 1290 1290 SO4 SO4 . W 3 SO4 H 1 1291 1291 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . V 3 4.393 49.19 -95.654 1 83.68 ? S SO4 1290 H 1 HETATM 2 O O1 SO4 . . . V 3 4.271 50.252 -94.657 1 83.15 ? O1 SO4 1290 H 1 HETATM 3 O O2 SO4 . . . V 3 5.77 49.134 -96.151 1 83.36 ? O2 SO4 1290 H 1 HETATM 4 O O3 SO4 . . . V 3 3.475 49.498 -96.749 1 83.5 ? O3 SO4 1290 H 1 HETATM 5 O O4 SO4 . . . V 3 4.032 47.893 -95.071 1 83.84 ? O4 SO4 1290 H 1 # _model_server_stats.io_time_ms 36 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #