data_2VEZ # _model_server_result.job_id DGBpqFIFaEKhEWwA8p6xGQ _model_server_result.datetime_utc '2024-11-22 20:08:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2vez # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 2VEZ # _exptl.entry_id 2VEZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.136 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 6-O-phosphono-alpha-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2VEZ _cell.length_a 70.677 _cell.length_b 100.541 _cell.length_c 55 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VEZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 70.677 0 27.5 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H13 O9 P' _chem_comp.formula_weight 260.136 _chem_comp.id G6P _chem_comp.mon_nstd_flag n _chem_comp.name 6-O-phosphono-alpha-D-glucopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms ALPHA-D-GLUCOSE-6-PHOSPHATE;6-O-phosphono-alpha-D-glucose;6-O-phosphono-D-glucose;6-O-phosphono-glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 G6P sing 174 n n C1 O1 G6P sing 175 n n C1 O5 G6P sing 176 n n C1 H1 G6P sing 177 n n C2 C3 G6P sing 178 n n C2 O2 G6P sing 179 n n C2 H2 G6P sing 180 n n C3 C4 G6P sing 181 n n C3 O3 G6P sing 182 n n C3 H3 G6P sing 183 n n C4 C5 G6P sing 184 n n C4 O4 G6P sing 185 n n C4 H4 G6P sing 186 n n C5 C6 G6P sing 187 n n C5 O5 G6P sing 188 n n C5 H5 G6P sing 189 n n C6 O6 G6P sing 190 n n C6 H61 G6P sing 191 n n C6 H62 G6P sing 192 n n O1 HO1 G6P sing 193 n n O2 HO2 G6P sing 194 n n O3 HO3 G6P sing 195 n n O4 HO4 G6P sing 196 n n O6 P G6P sing 197 n n P O1P G6P sing 198 n n P O2P G6P sing 199 n n P O3P G6P doub 200 n n O1P HO1P G6P sing 201 n n O2P HO2P G6P sing 202 n n # _pdbx_chem_comp_identifier.comp_id G6P _pdbx_chem_comp_identifier.identifier a-D-Glcp6PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 2VEZ _atom_sites.fract_transf_matrix[1][1] 0.014149 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009946 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018182 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACO A 1 201 1191 ACO ACO . C 3 G6P A 1 202 1192 G6P G6P . D 4 PO4 A 1 203 1193 PO4 PO4 . E 5 HOH A 1 301 2059 HOH HOH . E 5 HOH A 2 302 2034 HOH HOH . E 5 HOH A 3 303 2104 HOH HOH . E 5 HOH A 4 304 2035 HOH HOH . E 5 HOH A 5 305 2197 HOH HOH . E 5 HOH A 6 306 2122 HOH HOH . E 5 HOH A 7 307 2168 HOH HOH . E 5 HOH A 8 308 2051 HOH HOH . E 5 HOH A 9 309 2060 HOH HOH . E 5 HOH A 10 310 2140 HOH HOH . E 5 HOH A 11 311 2125 HOH HOH . E 5 HOH A 12 312 2099 HOH HOH . E 5 HOH A 13 313 2068 HOH HOH . E 5 HOH A 14 314 2030 HOH HOH . E 5 HOH A 15 315 2133 HOH HOH . E 5 HOH A 16 316 2039 HOH HOH . E 5 HOH A 17 317 2177 HOH HOH . E 5 HOH A 18 318 2023 HOH HOH . E 5 HOH A 19 319 2193 HOH HOH . E 5 HOH A 20 320 2056 HOH HOH . E 5 HOH A 21 321 2195 HOH HOH . E 5 HOH A 22 322 2162 HOH HOH . E 5 HOH A 23 323 2106 HOH HOH . E 5 HOH A 24 324 2128 HOH HOH . E 5 HOH A 25 325 2189 HOH HOH . E 5 HOH A 26 326 2036 HOH HOH . E 5 HOH A 27 327 2165 HOH HOH . E 5 HOH A 28 328 2089 HOH HOH . E 5 HOH A 29 329 2105 HOH HOH . E 5 HOH A 30 330 2136 HOH HOH . E 5 HOH A 31 331 2004 HOH HOH . E 5 HOH A 32 332 2070 HOH HOH . E 5 HOH A 33 333 2054 HOH HOH . E 5 HOH A 34 334 2114 HOH HOH . E 5 HOH A 35 335 2014 HOH HOH . E 5 HOH A 36 336 2123 HOH HOH . E 5 HOH A 37 337 2115 HOH HOH . E 5 HOH A 38 338 2130 HOH HOH . E 5 HOH A 39 339 2173 HOH HOH . E 5 HOH A 40 340 2026 HOH HOH . E 5 HOH A 41 341 2196 HOH HOH . E 5 HOH A 42 342 2147 HOH HOH . E 5 HOH A 43 343 2185 HOH HOH . E 5 HOH A 44 344 2151 HOH HOH . E 5 HOH A 45 345 2003 HOH HOH . E 5 HOH A 46 346 2011 HOH HOH . E 5 HOH A 47 347 2180 HOH HOH . E 5 HOH A 48 348 2135 HOH HOH . E 5 HOH A 49 349 2093 HOH HOH . E 5 HOH A 50 350 2113 HOH HOH . E 5 HOH A 51 351 2164 HOH HOH . E 5 HOH A 52 352 2021 HOH HOH . E 5 HOH A 53 353 2041 HOH HOH . E 5 HOH A 54 354 2182 HOH HOH . E 5 HOH A 55 355 2148 HOH HOH . E 5 HOH A 56 356 2161 HOH HOH . E 5 HOH A 57 357 2005 HOH HOH . E 5 HOH A 58 358 2084 HOH HOH . E 5 HOH A 59 359 2098 HOH HOH . E 5 HOH A 60 360 2048 HOH HOH . E 5 HOH A 61 361 2152 HOH HOH . E 5 HOH A 62 362 2174 HOH HOH . E 5 HOH A 63 363 2170 HOH HOH . E 5 HOH A 64 364 2138 HOH HOH . E 5 HOH A 65 365 2007 HOH HOH . E 5 HOH A 66 366 2176 HOH HOH . E 5 HOH A 67 367 2049 HOH HOH . E 5 HOH A 68 368 2149 HOH HOH . E 5 HOH A 69 369 2091 HOH HOH . E 5 HOH A 70 370 2111 HOH HOH . E 5 HOH A 71 371 2077 HOH HOH . E 5 HOH A 72 372 2110 HOH HOH . E 5 HOH A 73 373 2083 HOH HOH . E 5 HOH A 74 374 2156 HOH HOH . E 5 HOH A 75 375 2040 HOH HOH . E 5 HOH A 76 376 2198 HOH HOH . E 5 HOH A 77 377 2159 HOH HOH . E 5 HOH A 78 378 2013 HOH HOH . E 5 HOH A 79 379 2190 HOH HOH . E 5 HOH A 80 380 2134 HOH HOH . E 5 HOH A 81 381 2158 HOH HOH . E 5 HOH A 82 382 2076 HOH HOH . E 5 HOH A 83 383 2175 HOH HOH . E 5 HOH A 84 384 2116 HOH HOH . E 5 HOH A 85 385 2191 HOH HOH . E 5 HOH A 86 386 2126 HOH HOH . E 5 HOH A 87 387 2154 HOH HOH . E 5 HOH A 88 388 2192 HOH HOH . E 5 HOH A 89 389 2127 HOH HOH . E 5 HOH A 90 390 2087 HOH HOH . E 5 HOH A 91 391 2004 HOH HOH . E 5 HOH A 92 392 2142 HOH HOH . E 5 HOH A 93 393 2053 HOH HOH . E 5 HOH A 94 394 2169 HOH HOH . E 5 HOH A 95 395 2183 HOH HOH . E 5 HOH A 96 396 2017 HOH HOH . E 5 HOH A 97 397 2025 HOH HOH . E 5 HOH A 98 398 2163 HOH HOH . E 5 HOH A 99 399 2008 HOH HOH . E 5 HOH A 100 400 2107 HOH HOH . E 5 HOH A 101 401 2144 HOH HOH . E 5 HOH A 102 402 2046 HOH HOH . E 5 HOH A 103 403 2031 HOH HOH . E 5 HOH A 104 404 2020 HOH HOH . E 5 HOH A 105 405 2009 HOH HOH . E 5 HOH A 106 406 2003 HOH HOH . E 5 HOH A 107 407 2157 HOH HOH . E 5 HOH A 108 408 2155 HOH HOH . E 5 HOH A 109 409 2015 HOH HOH . E 5 HOH A 110 410 2108 HOH HOH . E 5 HOH A 111 411 2172 HOH HOH . E 5 HOH A 112 412 2002 HOH HOH . E 5 HOH A 113 413 2064 HOH HOH . E 5 HOH A 114 414 2117 HOH HOH . E 5 HOH A 115 415 2061 HOH HOH . E 5 HOH A 116 416 2153 HOH HOH . E 5 HOH A 117 417 2055 HOH HOH . E 5 HOH A 118 418 2102 HOH HOH . E 5 HOH A 119 419 2187 HOH HOH . E 5 HOH A 120 420 2109 HOH HOH . E 5 HOH A 121 421 2119 HOH HOH . E 5 HOH A 122 422 2145 HOH HOH . E 5 HOH A 123 423 2088 HOH HOH . E 5 HOH A 124 424 2112 HOH HOH . E 5 HOH A 125 425 2094 HOH HOH . E 5 HOH A 126 426 2103 HOH HOH . E 5 HOH A 127 427 2131 HOH HOH . E 5 HOH A 128 428 2171 HOH HOH . E 5 HOH A 129 429 2092 HOH HOH . E 5 HOH A 130 430 2179 HOH HOH . E 5 HOH A 131 431 2043 HOH HOH . E 5 HOH A 132 432 2058 HOH HOH . E 5 HOH A 133 433 2166 HOH HOH . E 5 HOH A 134 434 2167 HOH HOH . E 5 HOH A 135 435 2073 HOH HOH . E 5 HOH A 136 436 2146 HOH HOH . E 5 HOH A 137 437 2143 HOH HOH . E 5 HOH A 138 438 2188 HOH HOH . E 5 HOH A 139 439 2121 HOH HOH . E 5 HOH A 140 440 2001 HOH HOH . E 5 HOH A 141 441 2137 HOH HOH . E 5 HOH A 142 442 2078 HOH HOH . E 5 HOH A 143 443 2042 HOH HOH . E 5 HOH A 144 444 2050 HOH HOH . E 5 HOH A 145 445 2118 HOH HOH . E 5 HOH A 146 446 2057 HOH HOH . E 5 HOH A 147 447 2006 HOH HOH . E 5 HOH A 148 448 2002 HOH HOH . E 5 HOH A 149 449 2067 HOH HOH . E 5 HOH A 150 450 2194 HOH HOH . E 5 HOH A 151 451 2139 HOH HOH . E 5 HOH A 152 452 2186 HOH HOH . E 5 HOH A 153 453 2069 HOH HOH . E 5 HOH A 154 454 2129 HOH HOH . E 5 HOH A 155 455 2181 HOH HOH . E 5 HOH A 156 456 2052 HOH HOH . E 5 HOH A 157 457 2150 HOH HOH . E 5 HOH A 158 458 2141 HOH HOH . E 5 HOH A 159 459 2010 HOH HOH . E 5 HOH A 160 460 2132 HOH HOH . E 5 HOH A 161 461 2178 HOH HOH . E 5 HOH A 162 462 2120 HOH HOH . E 5 HOH A 163 463 2124 HOH HOH . E 5 HOH A 164 464 2184 HOH HOH . E 5 HOH A 165 465 2097 HOH HOH . E 5 HOH A 166 466 2090 HOH HOH . E 5 HOH A 167 467 2001 HOH HOH . E 5 HOH A 168 468 2063 HOH HOH . E 5 HOH A 169 469 2081 HOH HOH . E 5 HOH A 170 470 2066 HOH HOH . E 5 HOH A 171 471 2082 HOH HOH . E 5 HOH A 172 472 2071 HOH HOH . E 5 HOH A 173 473 2028 HOH HOH . E 5 HOH A 174 474 2012 HOH HOH . E 5 HOH A 175 475 2080 HOH HOH . E 5 HOH A 176 476 2160 HOH HOH . E 5 HOH A 177 477 2096 HOH HOH . E 5 HOH A 178 478 2022 HOH HOH . E 5 HOH A 179 479 2065 HOH HOH . E 5 HOH A 180 480 2085 HOH HOH . E 5 HOH A 181 481 2024 HOH HOH . E 5 HOH A 182 482 2100 HOH HOH . E 5 HOH A 183 483 2075 HOH HOH . E 5 HOH A 184 484 2079 HOH HOH . E 5 HOH A 185 485 2095 HOH HOH . E 5 HOH A 186 486 2029 HOH HOH . E 5 HOH A 187 487 2005 HOH HOH . E 5 HOH A 188 488 2038 HOH HOH . E 5 HOH A 189 489 2018 HOH HOH . E 5 HOH A 190 490 2033 HOH HOH . E 5 HOH A 191 491 2032 HOH HOH . E 5 HOH A 192 492 2045 HOH HOH . E 5 HOH A 193 493 2062 HOH HOH . E 5 HOH A 194 494 2037 HOH HOH . E 5 HOH A 195 495 2016 HOH HOH . E 5 HOH A 196 496 2074 HOH HOH . E 5 HOH A 197 497 2086 HOH HOH . E 5 HOH A 198 498 2027 HOH HOH . E 5 HOH A 199 499 2072 HOH HOH . E 5 HOH A 200 500 2019 HOH HOH . E 5 HOH A 201 501 2101 HOH HOH . E 5 HOH A 202 502 2047 HOH HOH . E 5 HOH A 203 503 2044 HOH HOH . E 5 HOH A 204 504 2006 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 G6P . . . C 3 34.964 40.544 5.475 1 24.3 ? C1 G6P 202 A 1 HETATM 2 C C2 G6P . . . C 3 33.871 39.528 5.821 1 22.77 ? C2 G6P 202 A 1 HETATM 3 C C3 G6P . . . C 3 34.418 38.094 5.774 1 22.09 ? C3 G6P 202 A 1 HETATM 4 C C4 G6P . . . C 3 35.123 37.782 4.461 1 22.58 ? C4 G6P 202 A 1 HETATM 5 C C5 G6P . . . C 3 36.171 38.856 4.209 1 24.66 ? C5 G6P 202 A 1 HETATM 6 C C6 G6P . . . C 3 36.897 38.596 2.902 1 26.79 ? C6 G6P 202 A 1 HETATM 7 O O1 G6P . . . C 3 34.431 41.868 5.514 1 25.09 ? O1 G6P 202 A 1 HETATM 8 O O2 G6P . . . C 3 33.406 39.743 7.132 1 23.58 ? O2 G6P 202 A 1 HETATM 9 O O3 G6P . . . C 3 33.343 37.209 5.933 1 17.08 ? O3 G6P 202 A 1 HETATM 10 O O4 G6P . . . C 3 35.755 36.523 4.595 1 20.27 ? O4 G6P 202 A 1 HETATM 11 O O5 G6P . . . C 3 35.549 40.176 4.183 1 25.11 ? O5 G6P 202 A 1 HETATM 12 O O6 G6P . . . C 3 37.923 39.572 2.764 1 27.7 ? O6 G6P 202 A 1 HETATM 13 P P G6P . . . C 3 39.463 39.071 2.614 1 26.34 ? P G6P 202 A 1 HETATM 14 O O1P G6P . . . C 3 40.421 40.331 2.558 1 28.74 ? O1P G6P 202 A 1 HETATM 15 O O2P G6P . . . C 3 39.581 38.453 1.14 1 26.22 ? O2P G6P 202 A 1 HETATM 16 O O3P G6P . . . C 3 39.875 38.015 3.591 1 24.69 ? O3P G6P 202 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 16 #