data_2VP6 # _model_server_result.job_id l2-6shWa4sdmgK4xMqXMzA _model_server_result.datetime_utc '2024-11-23 11:39:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2vp6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":1209}' # _entry.id 2VP6 # _exptl.entry_id 2VP6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.29 _cell.angle_gamma 90 _cell.entry_id 2VP6 _cell.length_a 70.352 _cell.length_b 70.714 _cell.length_c 225.396 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VP6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dimeric 2 author_and_software_defined_assembly 1 PQS dimeric 2 author_and_software_defined_assembly 2 PQS dimeric 2 author_and_software_defined_assembly 3 PQS dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J,K,L,M 1 1 C,D,N,O,P,Q 2 1 E,F,R,S,T,U 3 1 G,H,V,W,X,Y 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 J N N ? 2 L N N ? 2 N N N ? 2 P N N ? 2 R N N ? 2 T N N ? 2 V N N ? 2 X N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 323 n n S O2 SO4 doub 324 n n S O3 SO4 sing 325 n n S O4 SO4 sing 326 n n # _atom_sites.entry_id 2VP6 _atom_sites.fract_transf_matrix[1][1] 0.014214 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000072 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014141 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004437 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 SO4 A 1 1209 1209 SO4 SO4 . J 2 SO4 A 1 1210 1210 SO4 SO4 . K 3 5FU A 1 1211 1211 5FU 5FU . L 2 SO4 B 1 1209 1209 SO4 SO4 . M 3 5FU B 1 1210 1210 5FU 5FU . N 2 SO4 C 1 1209 1209 SO4 SO4 . O 3 5FU C 1 1210 1210 5FU 5FU . P 2 SO4 D 1 1209 1209 SO4 SO4 . Q 3 5FU D 1 1210 1210 5FU 5FU . R 2 SO4 E 1 1209 1209 SO4 SO4 . S 3 5FU E 1 1210 1210 5FU 5FU . T 2 SO4 F 1 1209 1209 SO4 SO4 . U 3 5FU F 1 1210 1210 5FU 5FU . V 2 SO4 G 1 1209 1209 SO4 SO4 . W 3 5FU G 1 1210 1210 5FU 5FU . X 2 SO4 H 1 1209 1209 SO4 SO4 . Y 3 5FU H 1 1210 1210 5FU 5FU . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . N 2 50.571 42.228 111.371 1 58.89 ? S SO4 1209 C 1 HETATM 2 O O1 SO4 . . . N 2 51.546 41.144 111.41 1 59.91 ? O1 SO4 1209 C 1 HETATM 3 O O2 SO4 . . . N 2 51.301 43.436 110.972 1 58.83 ? O2 SO4 1209 C 1 HETATM 4 O O3 SO4 . . . N 2 49.474 41.896 110.457 1 57.18 ? O3 SO4 1209 C 1 HETATM 5 O O4 SO4 . . . N 2 49.986 42.41 112.696 1 59.76 ? O4 SO4 1209 C 1 # _model_server_stats.io_time_ms 77 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 5 #