data_2VQ7
#
_model_server_result.job_id            Pm8wC3KyUR6pUWarmVJJVg 
_model_server_result.datetime_utc      '2024-11-24 18:43:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2vq7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"V","auth_seq_id":1454}' 
#
_entry.id    2VQ7 
#
_exptl.entry_id    2VQ7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.305 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2VQ7 
_cell.length_a            219.589 
_cell.length_b            219.589 
_cell.length_c            133.61 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2VQ7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 61' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS dimeric 2 author_and_software_defined_assembly 1 
PQS dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,I,J,S,T,U,V,W,Z 1 1 
B,C,K,L,M,N,O,P,Q,R,X,Y 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 I N N 
? 5 R N N 
? 5 V N N 
#
_chem_comp.formula           'C8 H18 N2 O4 S' 
_chem_comp.formula_weight    238.305 
_chem_comp.id                EPE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEPES 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 EPE sing 83 n n 
N1 C6 EPE sing 84 n n 
N1 C9 EPE sing 85 n n 
C2 C3 EPE sing 86 n n 
C2 H21 EPE sing 87 n n 
C2 H22 EPE sing 88 n n 
C3 N4 EPE sing 89 n n 
C3 H31 EPE sing 90 n n 
C3 H32 EPE sing 91 n n 
N4 C5 EPE sing 92 n n 
N4 C7 EPE sing 93 n n 
C5 C6 EPE sing 94 n n 
C5 H51 EPE sing 95 n n 
C5 H52 EPE sing 96 n n 
C6 H61 EPE sing 97 n n 
C6 H62 EPE sing 98 n n 
C7 C8 EPE sing 99 n n 
C7 H71 EPE sing 100 n n 
C7 H72 EPE sing 101 n n 
C8 O8 EPE sing 102 n n 
C8 H81 EPE sing 103 n n 
C8 H82 EPE sing 104 n n 
O8 HO8 EPE sing 105 n n 
C9 C10 EPE sing 106 n n 
C9 H91 EPE sing 107 n n 
C9 H92 EPE sing 108 n n 
C10 S EPE sing 109 n n 
C10 H101 EPE sing 110 n n 
C10 H102 EPE sing 111 n n 
S O1S EPE doub 112 n n 
S O2S EPE doub 113 n n 
S O3S EPE sing 114 n n 
O3S HOS3 EPE sing 115 n n 
#
_atom_sites.entry_id                     2VQ7 
_atom_sites.fract_transf_matrix[1][1]    0.004554 
_atom_sites.fract_transf_matrix[1][2]    0.002629 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005258 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007484 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 1451 1451 FAD FAD . 
F 3 NAP A 1 1452 1452 NAP NAP . 
G 4 CL A 1 1453 1453 CL CL . 
H 5 EPE A 1 1454 1454 EPE EPE . 
I 5 EPE A 1 1455 1455 EPE EPE . 
J 6 PGE A 1 1456 1456 PGE PGE . 
K 2 FAD B 1 1451 1451 FAD FAD . 
L 3 NAP B 1 1452 1452 NAP NAP . 
M 7 PG4 B 1 1453 1453 PG4 PG4 . 
N 4 CL B 1 1454 1454 CL CL . 
O 2 FAD C 1 1453 1453 FAD FAD . 
P 3 NAP C 1 1454 1454 NAP NAP . 
Q 4 CL C 1 1455 1455 CL CL . 
R 5 EPE C 1 1456 1456 EPE EPE . 
S 2 FAD D 1 1451 1451 FAD FAD . 
T 3 NAP D 1 1452 1452 NAP NAP . 
U 4 CL D 1 1453 1453 CL CL . 
V 5 EPE D 1 1454 1454 EPE EPE . 
W 8 HOH A 1 2001 2001 HOH HOH . 
W 8 HOH A 2 2002 2002 HOH HOH . 
W 8 HOH A 3 2003 2003 HOH HOH . 
W 8 HOH A 4 2004 2004 HOH HOH . 
W 8 HOH A 5 2005 2005 HOH HOH . 
W 8 HOH A 6 2006 2006 HOH HOH . 
W 8 HOH A 7 2007 2007 HOH HOH . 
W 8 HOH A 8 2008 2008 HOH HOH . 
W 8 HOH A 9 2009 2009 HOH HOH . 
W 8 HOH A 10 2010 2010 HOH HOH . 
W 8 HOH A 11 2011 2011 HOH HOH . 
W 8 HOH A 12 2012 2012 HOH HOH . 
W 8 HOH A 13 2013 2013 HOH HOH . 
W 8 HOH A 14 2014 2014 HOH HOH . 
W 8 HOH A 15 2015 2015 HOH HOH . 
W 8 HOH A 16 2016 2016 HOH HOH . 
W 8 HOH A 17 2017 2017 HOH HOH . 
W 8 HOH A 18 2018 2018 HOH HOH . 
W 8 HOH A 19 2019 2019 HOH HOH . 
W 8 HOH A 20 2020 2020 HOH HOH . 
W 8 HOH A 21 2021 2021 HOH HOH . 
W 8 HOH A 22 2022 2022 HOH HOH . 
W 8 HOH A 23 2023 2023 HOH HOH . 
W 8 HOH A 24 2024 2024 HOH HOH . 
W 8 HOH A 25 2025 2025 HOH HOH . 
W 8 HOH A 26 2026 2026 HOH HOH . 
W 8 HOH A 27 2027 2027 HOH HOH . 
W 8 HOH A 28 2028 2028 HOH HOH . 
W 8 HOH A 29 2029 2029 HOH HOH . 
W 8 HOH A 30 2030 2030 HOH HOH . 
W 8 HOH A 31 2031 2031 HOH HOH . 
W 8 HOH A 32 2032 2032 HOH HOH . 
W 8 HOH A 33 2033 2033 HOH HOH . 
W 8 HOH A 34 2034 2034 HOH HOH . 
W 8 HOH A 35 2035 2035 HOH HOH . 
W 8 HOH A 36 2036 2036 HOH HOH . 
W 8 HOH A 37 2037 2037 HOH HOH . 
W 8 HOH A 38 2038 2038 HOH HOH . 
W 8 HOH A 39 2039 2039 HOH HOH . 
W 8 HOH A 40 2040 2040 HOH HOH . 
W 8 HOH A 41 2041 2041 HOH HOH . 
X 8 HOH B 1 2001 2001 HOH HOH . 
X 8 HOH B 2 2002 2002 HOH HOH . 
X 8 HOH B 3 2003 2003 HOH HOH . 
X 8 HOH B 4 2004 2004 HOH HOH . 
X 8 HOH B 5 2005 2005 HOH HOH . 
X 8 HOH B 6 2006 2006 HOH HOH . 
X 8 HOH B 7 2007 2007 HOH HOH . 
X 8 HOH B 8 2008 2008 HOH HOH . 
X 8 HOH B 9 2009 2009 HOH HOH . 
X 8 HOH B 10 2010 2010 HOH HOH . 
X 8 HOH B 11 2011 2011 HOH HOH . 
X 8 HOH B 12 2012 2012 HOH HOH . 
X 8 HOH B 13 2013 2013 HOH HOH . 
X 8 HOH B 14 2014 2014 HOH HOH . 
X 8 HOH B 15 2015 2015 HOH HOH . 
X 8 HOH B 16 2016 2016 HOH HOH . 
X 8 HOH B 17 2017 2017 HOH HOH . 
X 8 HOH B 18 2018 2018 HOH HOH . 
X 8 HOH B 19 2019 2019 HOH HOH . 
X 8 HOH B 20 2020 2020 HOH HOH . 
X 8 HOH B 21 2021 2021 HOH HOH . 
X 8 HOH B 22 2022 2022 HOH HOH . 
X 8 HOH B 23 2023 2023 HOH HOH . 
X 8 HOH B 24 2024 2024 HOH HOH . 
X 8 HOH B 25 2025 2025 HOH HOH . 
X 8 HOH B 26 2026 2026 HOH HOH . 
X 8 HOH B 27 2027 2027 HOH HOH . 
X 8 HOH B 28 2028 2028 HOH HOH . 
X 8 HOH B 29 2029 2029 HOH HOH . 
X 8 HOH B 30 2030 2030 HOH HOH . 
X 8 HOH B 31 2031 2031 HOH HOH . 
X 8 HOH B 32 2032 2032 HOH HOH . 
X 8 HOH B 33 2033 2033 HOH HOH . 
Y 8 HOH C 1 2001 2001 HOH HOH . 
Y 8 HOH C 2 2002 2002 HOH HOH . 
Y 8 HOH C 3 2003 2003 HOH HOH . 
Y 8 HOH C 4 2004 2004 HOH HOH . 
Y 8 HOH C 5 2005 2005 HOH HOH . 
Y 8 HOH C 6 2006 2006 HOH HOH . 
Y 8 HOH C 7 2007 2007 HOH HOH . 
Y 8 HOH C 8 2008 2008 HOH HOH . 
Y 8 HOH C 9 2009 2009 HOH HOH . 
Y 8 HOH C 10 2010 2010 HOH HOH . 
Y 8 HOH C 11 2011 2011 HOH HOH . 
Y 8 HOH C 12 2012 2012 HOH HOH . 
Y 8 HOH C 13 2013 2013 HOH HOH . 
Y 8 HOH C 14 2014 2014 HOH HOH . 
Y 8 HOH C 15 2015 2015 HOH HOH . 
Y 8 HOH C 16 2016 2016 HOH HOH . 
Y 8 HOH C 17 2017 2017 HOH HOH . 
Y 8 HOH C 18 2018 2018 HOH HOH . 
Y 8 HOH C 19 2019 2019 HOH HOH . 
Y 8 HOH C 20 2020 2020 HOH HOH . 
Y 8 HOH C 21 2021 2021 HOH HOH . 
Y 8 HOH C 22 2022 2022 HOH HOH . 
Y 8 HOH C 23 2023 2023 HOH HOH . 
Y 8 HOH C 24 2024 2024 HOH HOH . 
Y 8 HOH C 25 2025 2025 HOH HOH . 
Y 8 HOH C 26 2026 2026 HOH HOH . 
Z 8 HOH D 1 2001 2001 HOH HOH . 
Z 8 HOH D 2 2002 2002 HOH HOH . 
Z 8 HOH D 3 2003 2003 HOH HOH . 
Z 8 HOH D 4 2004 2004 HOH HOH . 
Z 8 HOH D 5 2005 2005 HOH HOH . 
Z 8 HOH D 6 2006 2006 HOH HOH . 
Z 8 HOH D 7 2007 2007 HOH HOH . 
Z 8 HOH D 8 2008 2008 HOH HOH . 
Z 8 HOH D 9 2009 2009 HOH HOH . 
Z 8 HOH D 10 2010 2010 HOH HOH . 
Z 8 HOH D 11 2011 2011 HOH HOH . 
Z 8 HOH D 12 2012 2012 HOH HOH . 
Z 8 HOH D 13 2013 2013 HOH HOH . 
Z 8 HOH D 14 2014 2014 HOH HOH . 
Z 8 HOH D 15 2015 2015 HOH HOH . 
Z 8 HOH D 16 2016 2016 HOH HOH . 
Z 8 HOH D 17 2017 2017 HOH HOH . 
Z 8 HOH D 18 2018 2018 HOH HOH . 
Z 8 HOH D 19 2019 2019 HOH HOH . 
Z 8 HOH D 20 2020 2020 HOH HOH . 
Z 8 HOH D 21 2021 2021 HOH HOH . 
Z 8 HOH D 22 2022 2022 HOH HOH . 
Z 8 HOH D 23 2023 2023 HOH HOH . 
Z 8 HOH D 24 2024 2024 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 EPE . . . V 5 -41.835 166.327 -10.202 1 96.16 ? N1 EPE 1454 D 1 
HETATM 2 C C2 EPE . . . V 5 -40.392 166.419 -10.494 1 94.55 ? C2 EPE 1454 D 1 
HETATM 3 C C3 EPE . . . V 5 -40.165 167.149 -11.823 1 94.27 ? C3 EPE 1454 D 1 
HETATM 4 N N4 EPE . . . V 5 -41.178 168.135 -12.238 1 94.18 ? N4 EPE 1454 D 1 
HETATM 5 C C5 EPE . . . V 5 -42.468 168.275 -11.579 1 93.92 ? C5 EPE 1454 D 1 
HETATM 6 C C6 EPE . . . V 5 -42.49 167.645 -10.209 1 95.11 ? C6 EPE 1454 D 1 
HETATM 7 C C7 EPE . . . V 5 -40.943 168.9 -13.462 1 95.15 ? C7 EPE 1454 D 1 
HETATM 8 C C8 EPE . . . V 5 -42.178 169.26 -14.312 1 95.69 ? C8 EPE 1454 D 1 
HETATM 9 O O8 EPE . . . V 5 -43.245 169.756 -13.507 1 95.11 ? O8 EPE 1454 D 1 
HETATM 10 C C9 EPE . . . V 5 -42.08 165.728 -8.88 1 99.41 ? C9 EPE 1454 D 1 
HETATM 11 C C10 EPE . . . V 5 -43.586 165.576 -8.588 1 104.06 ? C10 EPE 1454 D 1 
HETATM 12 S S EPE . . . V 5 -44.441 166.846 -7.589 1 106.45 ? S EPE 1454 D 1 
HETATM 13 O O1S EPE . . . V 5 -44.943 167.961 -8.434 1 106.56 ? O1S EPE 1454 D 1 
HETATM 14 O O2S EPE . . . V 5 -43.515 167.398 -6.57 1 106.52 ? O2S EPE 1454 D 1 
HETATM 15 O O3S EPE . . . V 5 -45.583 166.18 -6.927 1 106.19 ? O3S EPE 1454 D 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           219 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           15 
#