data_2VQH # _model_server_result.job_id auMlKko1Lnx5ZkgipFKFZA _model_server_result.datetime_utc '2025-08-03 16:40:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2vqh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1094}' # _entry.id 2VQH # _exptl.entry_id 2VQH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 136.989 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CACODYLATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2VQH _cell.length_a 81.457 _cell.length_b 81.457 _cell.length_c 163.346 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VQH _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 software_defined_assembly 1 PQS monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I 1 1 B,J,K,L,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 81 A CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf2 B SG CYS 22 B CYS 22 1_555 B SG CYS 81 B CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc1 A OE2 GLU 26 A GLU 26 1_555 F ZN ZN . A ZN 1092 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.85 ? metalc ? metalc2 A OE2 GLU 37 A GLU 37 1_555 G ZN ZN . A ZN 1093 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc3 A OE2 GLU 46 A GLU 46 1_555 J ZN ZN . B ZN 1089 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.84 ? metalc ? metalc4 A OD1 ASP 65 A ASP 65 1_555 D ZN ZN . A ZN 1090 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc5 A OE2 GLU 68 A GLU 68 1_555 C ZN ZN . A ZN 1089 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc6 A OD2 ASP 69 A ASP 69 1_555 D ZN ZN . A ZN 1090 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.848 ? metalc ? metalc7 A OD2 ASP 76 A ASP 76 1_555 E ZN ZN . A ZN 1091 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.846 ? metalc ? metalc8 C ZN ZN . A ZN 1089 1_555 B OE2 GLU 68 B GLU 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc9 D ZN ZN . A ZN 1090 1_555 B OE2 GLU 46 B GLU 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc10 F ZN ZN . A ZN 1092 1_555 H O2 CAC . A CAC 1094 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.87 ? metalc ? metalc11 F ZN ZN . A ZN 1092 1_555 I O2 CAC . A CAC 1095 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.754 ? metalc ? metalc12 F ZN ZN . A ZN 1092 1_555 B OE2 GLU 26 B GLU 26 8_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc13 G ZN ZN . A ZN 1093 1_555 H O1 CAC . A CAC 1094 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.727 ? metalc ? metalc14 G ZN ZN . A ZN 1093 1_555 I O1 CAC . A CAC 1095 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.71 ? metalc ? metalc15 G ZN ZN . A ZN 1093 1_555 B OE1 GLU 37 B GLU 37 8_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc16 B OD1 ASP 65 B ASP 65 1_555 J ZN ZN . B ZN 1089 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc17 B OD2 ASP 69 B ASP 69 1_555 J ZN ZN . B ZN 1089 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc18 B OD1 ASP 69 B ASP 69 1_555 J ZN ZN . B ZN 1089 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc19 B OD2 ASP 76 B ASP 76 1_555 K ZN ZN . B ZN 1090 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc20 B OD1 ASP 76 B ASP 76 1_555 K ZN ZN . B ZN 1090 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc21 K ZN ZN . B ZN 1090 1_555 M O1 CAC . B CAC 1092 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? # _chem_comp.formula 'C2 H6 As O2 -1' _chem_comp.formula_weight 136.989 _chem_comp.id CAC _chem_comp.mon_nstd_flag . _chem_comp.name 'CACODYLATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms dimethylarsinate # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag AS O1 CAC doub 70 n n AS O2 CAC sing 71 n n AS C1 CAC sing 72 n n AS C2 CAC sing 73 n n C1 H11 CAC sing 74 n n C1 H12 CAC sing 75 n n C1 H13 CAC sing 76 n n C2 H21 CAC sing 77 n n C2 H22 CAC sing 78 n n C2 H23 CAC sing 79 n n # _atom_sites.entry_id 2VQH _atom_sites.fract_transf_matrix[1][1] 0.012276 _atom_sites.fract_transf_matrix[1][2] 0.007088 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014176 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006122 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 1089 1089 ZN ZN . D 2 ZN A 1 1090 1090 ZN ZN . E 2 ZN A 1 1091 1091 ZN ZN . F 2 ZN A 1 1092 1092 ZN ZN . G 2 ZN A 1 1093 1093 ZN ZN . H 3 CAC A 1 1094 1094 CAC CAC . I 3 CAC A 1 1095 1095 CAC CAC . J 2 ZN B 1 1089 1089 ZN ZN . K 2 ZN B 1 1090 1090 ZN ZN . L 2 ZN B 1 1091 1091 ZN ZN . M 3 CAC B 1 1092 1092 CAC CAC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 AS AS CAC . . . H 3 -17.306 34.228 -1.036 1 78.61 ? AS CAC 1094 A 1 HETATM 2 O O1 CAC . . . H 3 -18.396 33.742 -2.3 1 78.64 ? O1 CAC 1094 A 1 HETATM 3 O O2 CAC . . . H 3 -18.133 34.024 0.48 1 77.77 ? O2 CAC 1094 A 1 HETATM 4 C C1 CAC . . . H 3 -15.733 33.061 -1.069 1 77.63 ? C1 CAC 1094 A 1 HETATM 5 C C2 CAC . . . H 3 -16.849 36.11 -1.345 1 77.29 ? C2 CAC 1094 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #