data_2VSL # _model_server_result.job_id H1YEdBag2RgVieGzWIXPCA _model_server_result.datetime_utc '2024-12-02 13:51:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2vsl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1346}' # _entry.id 2VSL # _exptl.entry_id 2VSL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 1529.829 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POLYETHYLENE GLYCOL (N=34)' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2VSL _cell.length_a 102.478 _cell.length_b 102.478 _cell.length_c 65.218 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VSL _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C MAA 1 B MAA 1 1_555 B N LYS 2 B LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? metalc ? metalc1 A SG CYS 51 A CYS 300 1_555 D ZN ZN . A ZN 1347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc2 A SG CYS 54 A CYS 303 1_555 D ZN ZN . A ZN 1347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc3 A NE2 HIS 71 A HIS 320 1_555 D ZN ZN . A ZN 1347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc4 A SG CYS 78 A CYS 327 1_555 D ZN ZN . A ZN 1347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? # _chem_comp.formula 'C69 H140 O35' _chem_comp.formula_weight 1529.829 _chem_comp.id 15P _chem_comp.mon_nstd_flag . _chem_comp.name 'POLYETHYLENE GLYCOL (N=34)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'PEG 1500' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OXT C1 15P sing 1 n n OXT HXT 15P sing 2 n n C1 C2 15P sing 3 n n C1 H11 15P sing 4 n n C1 H21 15P sing 5 n n C2 O1 15P sing 6 n n C2 H12 15P sing 7 n n C2 H22 15P sing 8 n n O1 C3 15P sing 9 n n C3 C4 15P sing 10 n n C3 H13 15P sing 11 n n C3 H23 15P sing 12 n n C4 O2 15P sing 13 n n C4 H14 15P sing 14 n n C4 H24 15P sing 15 n n O2 C5 15P sing 16 n n C5 C6 15P sing 17 n n C5 H15 15P sing 18 n n C5 H25 15P sing 19 n n C6 O3 15P sing 20 n n C6 H16 15P sing 21 n n C6 H26 15P sing 22 n n O3 C7 15P sing 23 n n C7 C8 15P sing 24 n n C7 H17 15P sing 25 n n C7 H27 15P sing 26 n n C8 O4 15P sing 27 n n C8 H18 15P sing 28 n n C8 H28 15P sing 29 n n O4 C9 15P sing 30 n n C9 C10 15P sing 31 n n C9 H19 15P sing 32 n n C9 H29 15P sing 33 n n C10 O5 15P sing 34 n n C10 H101 15P sing 35 n n C10 H102 15P sing 36 n n O5 C11 15P sing 37 n n C11 C12 15P sing 38 n n C11 H111 15P sing 39 n n C11 H112 15P sing 40 n n C12 O6 15P sing 41 n n C12 H121 15P sing 42 n n C12 H122 15P sing 43 n n O6 C13 15P sing 44 n n C13 C14 15P sing 45 n n C13 H131 15P sing 46 n n C13 H132 15P sing 47 n n C14 O7 15P sing 48 n n C14 H141 15P sing 49 n n C14 H142 15P sing 50 n n O7 C15 15P sing 51 n n C15 C16 15P sing 52 n n C15 H151 15P sing 53 n n C15 H152 15P sing 54 n n C16 O8 15P sing 55 n n C16 H161 15P sing 56 n n C16 H162 15P sing 57 n n O8 C17 15P sing 58 n n C17 C18 15P sing 59 n n C17 H171 15P sing 60 n n C17 H172 15P sing 61 n n C18 O9 15P sing 62 n n C18 H181 15P sing 63 n n C18 H182 15P sing 64 n n O9 C19 15P sing 65 n n C19 C20 15P sing 66 n n C19 H191 15P sing 67 n n C19 H192 15P sing 68 n n C20 O10 15P sing 69 n n C20 H201 15P sing 70 n n C20 H202 15P sing 71 n n O10 C21 15P sing 72 n n C21 C22 15P sing 73 n n C21 H211 15P sing 74 n n C21 H212 15P sing 75 n n C22 O11 15P sing 76 n n C22 H221 15P sing 77 n n C22 H222 15P sing 78 n n O11 C23 15P sing 79 n n C23 C24 15P sing 80 n n C23 H231 15P sing 81 n n C23 H232 15P sing 82 n n C24 O12 15P sing 83 n n C24 H241 15P sing 84 n n C24 H242 15P sing 85 n n O12 C25 15P sing 86 n n C25 C26 15P sing 87 n n C25 H251 15P sing 88 n n C25 H252 15P sing 89 n n C26 O13 15P sing 90 n n C26 H261 15P sing 91 n n C26 H262 15P sing 92 n n O13 C27 15P sing 93 n n C27 C28 15P sing 94 n n C27 H271 15P sing 95 n n C27 H272 15P sing 96 n n C28 O14 15P sing 97 n n C28 H281 15P sing 98 n n C28 H282 15P sing 99 n n O14 C29 15P sing 100 n n C29 C30 15P sing 101 n n C29 H291 15P sing 102 n n C29 H292 15P sing 103 n n C30 O15 15P sing 104 n n C30 H301 15P sing 105 n n C30 H302 15P sing 106 n n O15 C31 15P sing 107 n n C31 C32 15P sing 108 n n C31 H311 15P sing 109 n n C31 H312 15P sing 110 n n C32 O16 15P sing 111 n n C32 H321 15P sing 112 n n C32 H322 15P sing 113 n n O16 C33 15P sing 114 n n C33 C34 15P sing 115 n n C33 H331 15P sing 116 n n C33 H332 15P sing 117 n n C34 O17 15P sing 118 n n C34 H341 15P sing 119 n n C34 H342 15P sing 120 n n O17 C35 15P sing 121 n n C35 C36 15P sing 122 n n C35 H351 15P sing 123 n n C35 H352 15P sing 124 n n C36 O18 15P sing 125 n n C36 H361 15P sing 126 n n C36 H362 15P sing 127 n n O18 C37 15P sing 128 n n C37 C38 15P sing 129 n n C37 H371 15P sing 130 n n C37 H372 15P sing 131 n n C38 O19 15P sing 132 n n C38 H381 15P sing 133 n n C38 H382 15P sing 134 n n O19 C39 15P sing 135 n n C39 C40 15P sing 136 n n C39 H391 15P sing 137 n n C39 H392 15P sing 138 n n C40 O20 15P sing 139 n n C40 H401 15P sing 140 n n C40 H402 15P sing 141 n n O20 C41 15P sing 142 n n C41 C42 15P sing 143 n n C41 H411 15P sing 144 n n C41 H412 15P sing 145 n n C42 O21 15P sing 146 n n C42 H421 15P sing 147 n n C42 H422 15P sing 148 n n O21 C43 15P sing 149 n n C43 C44 15P sing 150 n n C43 H431 15P sing 151 n n C43 H432 15P sing 152 n n C44 O22 15P sing 153 n n C44 H441 15P sing 154 n n C44 H442 15P sing 155 n n O22 C45 15P sing 156 n n C45 C46 15P sing 157 n n C45 H451 15P sing 158 n n C45 H452 15P sing 159 n n C46 O23 15P sing 160 n n C46 H461 15P sing 161 n n C46 H462 15P sing 162 n n O23 C47 15P sing 163 n n C47 C48 15P sing 164 n n C47 H471 15P sing 165 n n C47 H472 15P sing 166 n n C48 O24 15P sing 167 n n C48 H481 15P sing 168 n n C48 H482 15P sing 169 n n O24 C49 15P sing 170 n n C49 C50 15P sing 171 n n C49 H491 15P sing 172 n n C49 H492 15P sing 173 n n C50 O25 15P sing 174 n n C50 H501 15P sing 175 n n C50 H502 15P sing 176 n n O25 C51 15P sing 177 n n C51 C52 15P sing 178 n n C51 H511 15P sing 179 n n C51 H512 15P sing 180 n n C52 O26 15P sing 181 n n C52 H521 15P sing 182 n n C52 H522 15P sing 183 n n O26 C53 15P sing 184 n n C53 C54 15P sing 185 n n C53 H531 15P sing 186 n n C53 H532 15P sing 187 n n C54 O27 15P sing 188 n n C54 H541 15P sing 189 n n C54 H542 15P sing 190 n n O27 C55 15P sing 191 n n C55 C56 15P sing 192 n n C55 H551 15P sing 193 n n C55 H552 15P sing 194 n n C56 O28 15P sing 195 n n C56 H561 15P sing 196 n n C56 H562 15P sing 197 n n O28 C57 15P sing 198 n n C57 C58 15P sing 199 n n C57 H571 15P sing 200 n n C57 H572 15P sing 201 n n C58 O29 15P sing 202 n n C58 H581 15P sing 203 n n C58 H582 15P sing 204 n n O29 C59 15P sing 205 n n C59 C60 15P sing 206 n n C59 H591 15P sing 207 n n C59 H592 15P sing 208 n n C60 O30 15P sing 209 n n C60 H601 15P sing 210 n n C60 H602 15P sing 211 n n O30 C61 15P sing 212 n n C61 C62 15P sing 213 n n C61 H611 15P sing 214 n n C61 H612 15P sing 215 n n C62 O31 15P sing 216 n n C62 H621 15P sing 217 n n C62 H622 15P sing 218 n n O31 C63 15P sing 219 n n C63 C64 15P sing 220 n n C63 H631 15P sing 221 n n C63 H632 15P sing 222 n n C64 O32 15P sing 223 n n C64 H641 15P sing 224 n n C64 H642 15P sing 225 n n O32 C65 15P sing 226 n n C65 C66 15P sing 227 n n C65 H651 15P sing 228 n n C65 H652 15P sing 229 n n C66 O33 15P sing 230 n n C66 H661 15P sing 231 n n C66 H662 15P sing 232 n n O33 C67 15P sing 233 n n C67 C68 15P sing 234 n n C67 H671 15P sing 235 n n C67 H672 15P sing 236 n n C68 O34 15P sing 237 n n C68 H681 15P sing 238 n n C68 H682 15P sing 239 n n O34 CM 15P sing 240 n n CM HCM1 15P sing 241 n n CM HCM2 15P sing 242 n n CM HCM3 15P sing 243 n n # _atom_sites.entry_id 2VSL _atom_sites.fract_transf_matrix[1][1] 0.009758 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009758 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015333 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 15P A 1 1346 1346 15P 15P . D 4 ZN A 1 1347 1347 ZN ZN . E 5 HOH A 1 2001 2001 HOH HOH . E 5 HOH A 2 2002 2002 HOH HOH . E 5 HOH A 3 2003 2003 HOH HOH . E 5 HOH A 4 2004 2004 HOH HOH . E 5 HOH A 5 2005 2005 HOH HOH . E 5 HOH A 6 2006 2006 HOH HOH . E 5 HOH A 7 2007 2007 HOH HOH . E 5 HOH A 8 2008 2008 HOH HOH . E 5 HOH A 9 2009 2009 HOH HOH . E 5 HOH A 10 2010 2010 HOH HOH . E 5 HOH A 11 2011 2011 HOH HOH . E 5 HOH A 12 2012 2012 HOH HOH . E 5 HOH A 13 2013 2013 HOH HOH . E 5 HOH A 14 2014 2014 HOH HOH . E 5 HOH A 15 2015 2015 HOH HOH . E 5 HOH A 16 2016 2016 HOH HOH . E 5 HOH A 17 2017 2017 HOH HOH . E 5 HOH A 18 2018 2018 HOH HOH . E 5 HOH A 19 2019 2019 HOH HOH . E 5 HOH A 20 2020 2020 HOH HOH . E 5 HOH A 21 2021 2021 HOH HOH . E 5 HOH A 22 2022 2022 HOH HOH . E 5 HOH A 23 2023 2023 HOH HOH . E 5 HOH A 24 2024 2024 HOH HOH . E 5 HOH A 25 2025 2025 HOH HOH . E 5 HOH A 26 2026 2026 HOH HOH . E 5 HOH A 27 2027 2027 HOH HOH . E 5 HOH A 28 2028 2028 HOH HOH . E 5 HOH A 29 2029 2029 HOH HOH . E 5 HOH A 30 2030 2030 HOH HOH . E 5 HOH A 31 2031 2031 HOH HOH . E 5 HOH A 32 2032 2032 HOH HOH . E 5 HOH A 33 2033 2033 HOH HOH . E 5 HOH A 34 2034 2034 HOH HOH . E 5 HOH A 35 2035 2035 HOH HOH . E 5 HOH A 36 2036 2036 HOH HOH . E 5 HOH A 37 2037 2037 HOH HOH . E 5 HOH A 38 2038 2038 HOH HOH . E 5 HOH A 39 2039 2039 HOH HOH . E 5 HOH A 40 2040 2040 HOH HOH . E 5 HOH A 41 2041 2041 HOH HOH . E 5 HOH A 42 2042 2042 HOH HOH . E 5 HOH A 43 2043 2043 HOH HOH . E 5 HOH A 44 2044 2044 HOH HOH . E 5 HOH A 45 2045 2045 HOH HOH . E 5 HOH A 46 2046 2046 HOH HOH . E 5 HOH A 47 2047 2047 HOH HOH . E 5 HOH A 48 2048 2048 HOH HOH . E 5 HOH A 49 2049 2049 HOH HOH . E 5 HOH A 50 2050 2050 HOH HOH . E 5 HOH A 51 2051 2051 HOH HOH . E 5 HOH A 52 2052 2052 HOH HOH . E 5 HOH A 53 2053 2053 HOH HOH . E 5 HOH A 54 2054 2054 HOH HOH . E 5 HOH A 55 2055 2055 HOH HOH . E 5 HOH A 56 2056 2056 HOH HOH . E 5 HOH A 57 2057 2057 HOH HOH . E 5 HOH A 58 2058 2058 HOH HOH . F 5 HOH B 1 2001 2001 HOH HOH . F 5 HOH B 2 2002 2002 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OXT 15P . . . C 3 15.731 21.217 34.635 1 62.84 ? OXT 15P 1346 A 1 HETATM 2 C C1 15P . . . C 3 16.339 21.886 33.523 1 67.26 ? C1 15P 1346 A 1 HETATM 3 C C2 15P . . . C 3 17.271 20.918 32.785 1 68.26 ? C2 15P 1346 A 1 HETATM 4 O O1 15P . . . C 3 18.62 21.116 33.22 1 70.38 ? O1 15P 1346 A 1 HETATM 5 C C3 15P . . . C 3 19.431 20.185 32.497 1 70.06 ? C3 15P 1346 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #