data_2VV0 # _model_server_result.job_id VseEJY2yWsuIcQxor32iZA _model_server_result.datetime_utc '2024-11-05 00:27:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2vv0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1477}' # _entry.id 2VV0 # _exptl.entry_id 2VV0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.488 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.19 _cell.angle_gamma 90 _cell.entry_id 2VV0 _cell.length_a 93.09 _cell.length_b 61.28 _cell.length_c 118.55 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VV0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C22 H32 O2' _chem_comp.formula_weight 328.488 _chem_comp.id HXA _chem_comp.mon_nstd_flag . _chem_comp.name 'DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HXA doub 152 n n C1 O2 HXA sing 153 n n C1 C2 HXA sing 154 n n O2 HO2 HXA sing 155 n n C2 C3 HXA sing 156 n n C2 H21 HXA sing 157 n n C2 H22 HXA sing 158 n n C3 C4 HXA sing 159 n n C3 H31 HXA sing 160 n n C3 H32 HXA sing 161 n n C4 C5 HXA doub 162 z n C4 H4 HXA sing 163 n n C5 C6 HXA sing 164 n n C5 H5 HXA sing 165 n n C6 C7 HXA sing 166 n n C6 H61 HXA sing 167 n n C6 H62 HXA sing 168 n n C7 C8 HXA doub 169 z n C7 H7 HXA sing 170 n n C8 C9 HXA sing 171 n n C8 H8 HXA sing 172 n n C9 C10 HXA sing 173 n n C9 H91 HXA sing 174 n n C9 H92 HXA sing 175 n n C10 C11 HXA doub 176 z n C10 H10 HXA sing 177 n n C11 C12 HXA sing 178 n n C11 H11 HXA sing 179 n n C12 C13 HXA sing 180 n n C12 H121 HXA sing 181 n n C12 H122 HXA sing 182 n n C13 C14 HXA doub 183 z n C13 H13 HXA sing 184 n n C14 C15 HXA sing 185 n n C14 H14 HXA sing 186 n n C15 C16 HXA sing 187 n n C15 H151 HXA sing 188 n n C15 H152 HXA sing 189 n n C16 C17 HXA doub 190 z n C16 H16 HXA sing 191 n n C17 C18 HXA sing 192 n n C17 H17 HXA sing 193 n n C18 C19 HXA sing 194 n n C18 H181 HXA sing 195 n n C18 H182 HXA sing 196 n n C19 C20 HXA doub 197 z n C19 H19 HXA sing 198 n n C20 C21 HXA sing 199 n n C20 H20 HXA sing 200 n n C21 C22 HXA sing 201 n n C21 H211 HXA sing 202 n n C21 H212 HXA sing 203 n n C22 H221 HXA sing 204 n n C22 H222 HXA sing 205 n n C22 H223 HXA sing 206 n n # _atom_sites.entry_id 2VV0 _atom_sites.fract_transf_matrix[1][1] 0.010742 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002518 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016319 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008664 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HXA A 1 1476 1476 HXA HXA . D 2 HXA B 1 1477 1477 HXA HXA . E 3 HOH A 1 2001 2001 HOH HOH . E 3 HOH A 2 2002 2002 HOH HOH . E 3 HOH A 3 2003 2003 HOH HOH . E 3 HOH A 4 2004 2004 HOH HOH . E 3 HOH A 5 2005 2005 HOH HOH . E 3 HOH A 6 2006 2006 HOH HOH . E 3 HOH A 7 2007 2007 HOH HOH . E 3 HOH A 8 2008 2008 HOH HOH . E 3 HOH A 9 2009 2009 HOH HOH . E 3 HOH A 10 2010 2010 HOH HOH . E 3 HOH A 11 2011 2011 HOH HOH . E 3 HOH A 12 2012 2012 HOH HOH . E 3 HOH A 13 2013 2013 HOH HOH . E 3 HOH A 14 2014 2014 HOH HOH . E 3 HOH A 15 2015 2015 HOH HOH . E 3 HOH A 16 2016 2016 HOH HOH . E 3 HOH A 17 2017 2017 HOH HOH . E 3 HOH A 18 2018 2018 HOH HOH . E 3 HOH A 19 2019 2019 HOH HOH . E 3 HOH A 20 2020 2020 HOH HOH . E 3 HOH A 21 2021 2021 HOH HOH . E 3 HOH A 22 2022 2022 HOH HOH . E 3 HOH A 23 2023 2023 HOH HOH . E 3 HOH A 24 2024 2024 HOH HOH . E 3 HOH A 25 2025 2025 HOH HOH . E 3 HOH A 26 2026 2026 HOH HOH . E 3 HOH A 27 2027 2027 HOH HOH . E 3 HOH A 28 2028 2028 HOH HOH . E 3 HOH A 29 2029 2029 HOH HOH . E 3 HOH A 30 2030 2030 HOH HOH . F 3 HOH B 1 2001 2001 HOH HOH . F 3 HOH B 2 2002 2002 HOH HOH . F 3 HOH B 3 2003 2003 HOH HOH . F 3 HOH B 4 2004 2004 HOH HOH . F 3 HOH B 5 2005 2005 HOH HOH . F 3 HOH B 6 2006 2006 HOH HOH . F 3 HOH B 7 2007 2007 HOH HOH . F 3 HOH B 8 2008 2008 HOH HOH . F 3 HOH B 9 2009 2009 HOH HOH . F 3 HOH B 10 2010 2010 HOH HOH . F 3 HOH B 11 2011 2011 HOH HOH . F 3 HOH B 12 2012 2012 HOH HOH . F 3 HOH B 13 2013 2013 HOH HOH . F 3 HOH B 14 2014 2014 HOH HOH . F 3 HOH B 15 2015 2015 HOH HOH . F 3 HOH B 16 2016 2016 HOH HOH . F 3 HOH B 17 2017 2017 HOH HOH . F 3 HOH B 18 2018 2018 HOH HOH . F 3 HOH B 19 2019 2019 HOH HOH . F 3 HOH B 20 2020 2020 HOH HOH . F 3 HOH B 21 2021 2021 HOH HOH . F 3 HOH B 22 2022 2022 HOH HOH . F 3 HOH B 23 2023 2023 HOH HOH . F 3 HOH B 24 2024 2024 HOH HOH . F 3 HOH B 25 2025 2025 HOH HOH . F 3 HOH B 26 2026 2026 HOH HOH . F 3 HOH B 27 2027 2027 HOH HOH . F 3 HOH B 28 2028 2028 HOH HOH . F 3 HOH B 29 2029 2029 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HXA . . . D 2 33.31 -13.252 36.808 1 71.98 ? C1 HXA 1477 B 1 HETATM 2 O O1 HXA . . . D 2 32.549 -12.905 35.888 1 71.91 ? O1 HXA 1477 B 1 HETATM 3 O O2 HXA . . . D 2 32.929 -13.963 37.759 1 71.43 ? O2 HXA 1477 B 1 HETATM 4 C C2 HXA . . . D 2 34.747 -12.798 36.757 1 72.15 ? C2 HXA 1477 B 1 HETATM 5 C C3 HXA . . . D 2 35.014 -11.808 37.882 1 73.8 ? C3 HXA 1477 B 1 HETATM 6 C C4 HXA . . . D 2 35.714 -10.598 37.317 1 73.35 ? C4 HXA 1477 B 1 HETATM 7 C C5 HXA . . . D 2 36.213 -9.676 38.132 1 74.59 ? C5 HXA 1477 B 1 HETATM 8 C C6 HXA . . . D 2 36.088 -9.826 39.628 1 74.61 ? C6 HXA 1477 B 1 HETATM 9 C C7 HXA . . . D 2 34.795 -9.203 40.085 1 75.13 ? C7 HXA 1477 B 1 HETATM 10 C C8 HXA . . . D 2 34.715 -8.565 41.246 1 74.05 ? C8 HXA 1477 B 1 HETATM 11 C C9 HXA . . . D 2 35.918 -8.441 42.143 1 73.8 ? C9 HXA 1477 B 1 HETATM 12 C C10 HXA . . . D 2 35.818 -7.135 42.892 1 74.07 ? C10 HXA 1477 B 1 HETATM 13 C C11 HXA . . . D 2 36.599 -6.908 43.941 1 73.7 ? C11 HXA 1477 B 1 HETATM 14 C C12 HXA . . . D 2 37.587 -7.96 44.378 1 73.23 ? C12 HXA 1477 B 1 HETATM 15 C C13 HXA . . . D 2 38.938 -7.659 43.783 1 71.95 ? C13 HXA 1477 B 1 HETATM 16 C C14 HXA . . . D 2 39.768 -8.656 43.501 1 71.04 ? C14 HXA 1477 B 1 HETATM 17 C C15 HXA . . . D 2 39.345 -10.076 43.781 1 69.05 ? C15 HXA 1477 B 1 HETATM 18 C C16 HXA . . . D 2 40.012 -11.006 42.803 1 66.62 ? C16 HXA 1477 B 1 HETATM 19 C C17 HXA . . . D 2 39.304 -11.963 42.22 1 66.22 ? C17 HXA 1477 B 1 HETATM 20 C C18 HXA . . . D 2 37.837 -12.112 42.531 1 66.1 ? C18 HXA 1477 B 1 HETATM 21 C C19 HXA . . . D 2 37.478 -13.576 42.494 1 65.9 ? C19 HXA 1477 B 1 HETATM 22 C C20 HXA . . . D 2 36.267 -13.962 42.107 1 66.51 ? C20 HXA 1477 B 1 HETATM 23 C C21 HXA . . . D 2 35.233 -12.946 41.695 1 66.36 ? C21 HXA 1477 B 1 HETATM 24 C C22 HXA . . . D 2 34.393 -13.531 40.582 1 66.55 ? C22 HXA 1477 B 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #