data_2VWW # _model_server_result.job_id 2dXHykdjjjJjyEqqTtsEmw _model_server_result.datetime_utc '2024-10-10 13:27:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2vww # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1888}' # _entry.id 2VWW # _exptl.entry_id 2VWW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 430.842 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N'-(5-CHLORO-1,3-BENZODIOXOL-4-YL)-N-(3,4,5- TRIMETHOXYPHENYL)PYRIMIDINE-2,4-DIAMINE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.38 _cell.angle_gamma 90 _cell.entry_id 2VWW _cell.length_a 46.462 _cell.length_b 53.414 _cell.length_c 61.644 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VWW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H19 Cl N4 O5' _chem_comp.formula_weight 430.842 _chem_comp.id 7X2 _chem_comp.mon_nstd_flag . _chem_comp.name "N'-(5-CHLORO-1,3-BENZODIOXOL-4-YL)-N-(3,4,5- TRIMETHOXYPHENYL)PYRIMIDINE-2,4-DIAMINE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O2 7X2 sing 1 n n O2 C3 7X2 sing 2 n n C3 C4 7X2 sing 3 n y C3 C28 7X2 doub 4 n y C4 C5 7X2 doub 5 n y C5 N6 7X2 sing 6 n n C5 C24 7X2 sing 7 n y N6 C7 7X2 sing 8 n n C7 N8 7X2 sing 9 n y C7 N23 7X2 doub 10 n y N8 C9 7X2 doub 11 n y C9 C10 7X2 sing 12 n y C10 C11 7X2 doub 13 n y C11 N12 7X2 sing 14 n n C11 N23 7X2 sing 15 n y N12 C13 7X2 sing 16 n n C13 C14 7X2 sing 17 n y C13 C21 7X2 doub 18 n y C14 O15 7X2 sing 19 n n C14 C18 7X2 doub 20 n y O15 C16 7X2 sing 21 n n C16 O17 7X2 sing 22 n n O17 C18 7X2 sing 23 n n C18 C19 7X2 sing 24 n y C19 C20 7X2 doub 25 n y C20 C21 7X2 sing 26 n y C21 CL1 7X2 sing 27 n n C24 C25 7X2 doub 28 n y C25 O26 7X2 sing 29 n n C25 C28 7X2 sing 30 n y O26 C27 7X2 sing 31 n n C28 O29 7X2 sing 32 n n O29 C30 7X2 sing 33 n n C1 H1C1 7X2 sing 34 n n C1 H1C2 7X2 sing 35 n n C1 H1C3 7X2 sing 36 n n C4 H4 7X2 sing 37 n n N6 H6 7X2 sing 38 n n C24 H24 7X2 sing 39 n n C9 H9 7X2 sing 40 n n C10 H10 7X2 sing 41 n n N12 H12 7X2 sing 42 n n C16 H161 7X2 sing 43 n n C16 H162 7X2 sing 44 n n C19 H19 7X2 sing 45 n n C20 H20 7X2 sing 46 n n C27 H271 7X2 sing 47 n n C27 H272 7X2 sing 48 n n C27 H273 7X2 sing 49 n n C30 H301 7X2 sing 50 n n C30 H302 7X2 sing 51 n n C30 H303 7X2 sing 52 n n # _atom_sites.entry_id 2VWW _atom_sites.fract_transf_matrix[1][1] 0.021523 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008426 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018722 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017421 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7X2 A 1 1888 1888 7X2 7X2 . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2028 2028 HOH HOH . C 3 HOH A 29 2029 2029 HOH HOH . C 3 HOH A 30 2030 2030 HOH HOH . C 3 HOH A 31 2031 2031 HOH HOH . C 3 HOH A 32 2032 2032 HOH HOH . C 3 HOH A 33 2033 2033 HOH HOH . C 3 HOH A 34 2034 2034 HOH HOH . C 3 HOH A 35 2035 2035 HOH HOH . C 3 HOH A 36 2036 2036 HOH HOH . C 3 HOH A 37 2037 2037 HOH HOH . C 3 HOH A 38 2038 2038 HOH HOH . C 3 HOH A 39 2039 2039 HOH HOH . C 3 HOH A 40 2040 2040 HOH HOH . C 3 HOH A 41 2041 2041 HOH HOH . C 3 HOH A 42 2042 2042 HOH HOH . C 3 HOH A 43 2043 2043 HOH HOH . C 3 HOH A 44 2044 2044 HOH HOH . C 3 HOH A 45 2045 2045 HOH HOH . C 3 HOH A 46 2046 2046 HOH HOH . C 3 HOH A 47 2047 2047 HOH HOH . C 3 HOH A 48 2048 2048 HOH HOH . C 3 HOH A 49 2049 2049 HOH HOH . C 3 HOH A 50 2050 2050 HOH HOH . C 3 HOH A 51 2051 2051 HOH HOH . C 3 HOH A 52 2052 2052 HOH HOH . C 3 HOH A 53 2053 2053 HOH HOH . C 3 HOH A 54 2054 2054 HOH HOH . C 3 HOH A 55 2055 2055 HOH HOH . C 3 HOH A 56 2056 2056 HOH HOH . C 3 HOH A 57 2057 2057 HOH HOH . C 3 HOH A 58 2058 2058 HOH HOH . C 3 HOH A 59 2059 2059 HOH HOH . C 3 HOH A 60 2060 2060 HOH HOH . C 3 HOH A 61 2061 2061 HOH HOH . C 3 HOH A 62 2062 2062 HOH HOH . C 3 HOH A 63 2063 2063 HOH HOH . C 3 HOH A 64 2064 2064 HOH HOH . C 3 HOH A 65 2065 2065 HOH HOH . C 3 HOH A 66 2066 2066 HOH HOH . C 3 HOH A 67 2067 2067 HOH HOH . C 3 HOH A 68 2068 2068 HOH HOH . C 3 HOH A 69 2069 2069 HOH HOH . C 3 HOH A 70 2070 2070 HOH HOH . C 3 HOH A 71 2071 2071 HOH HOH . C 3 HOH A 72 2072 2072 HOH HOH . C 3 HOH A 73 2073 2073 HOH HOH . C 3 HOH A 74 2074 2074 HOH HOH . C 3 HOH A 75 2075 2075 HOH HOH . C 3 HOH A 76 2076 2076 HOH HOH . C 3 HOH A 77 2077 2077 HOH HOH . C 3 HOH A 78 2078 2078 HOH HOH . C 3 HOH A 79 2079 2079 HOH HOH . C 3 HOH A 80 2080 2080 HOH HOH . C 3 HOH A 81 2081 2081 HOH HOH . C 3 HOH A 82 2082 2082 HOH HOH . C 3 HOH A 83 2083 2083 HOH HOH . C 3 HOH A 84 2084 2084 HOH HOH . C 3 HOH A 85 2085 2085 HOH HOH . C 3 HOH A 86 2086 2086 HOH HOH . C 3 HOH A 87 2087 2087 HOH HOH . C 3 HOH A 88 2088 2088 HOH HOH . C 3 HOH A 89 2089 2089 HOH HOH . C 3 HOH A 90 2090 2090 HOH HOH . C 3 HOH A 91 2091 2091 HOH HOH . C 3 HOH A 92 2092 2092 HOH HOH . C 3 HOH A 93 2093 2093 HOH HOH . C 3 HOH A 94 2094 2094 HOH HOH . C 3 HOH A 95 2095 2095 HOH HOH . C 3 HOH A 96 2096 2096 HOH HOH . C 3 HOH A 97 2097 2097 HOH HOH . C 3 HOH A 98 2098 2098 HOH HOH . C 3 HOH A 99 2099 2099 HOH HOH . C 3 HOH A 100 2100 2100 HOH HOH . C 3 HOH A 101 2101 2101 HOH HOH . C 3 HOH A 102 2102 2102 HOH HOH . C 3 HOH A 103 2103 2103 HOH HOH . C 3 HOH A 104 2104 2104 HOH HOH . C 3 HOH A 105 2105 2105 HOH HOH . C 3 HOH A 106 2106 2106 HOH HOH . C 3 HOH A 107 2107 2107 HOH HOH . C 3 HOH A 108 2108 2108 HOH HOH . C 3 HOH A 109 2109 2109 HOH HOH . C 3 HOH A 110 2110 2110 HOH HOH . C 3 HOH A 111 2111 2111 HOH HOH . C 3 HOH A 112 2112 2112 HOH HOH . C 3 HOH A 113 2113 2113 HOH HOH . C 3 HOH A 114 2114 2114 HOH HOH . C 3 HOH A 115 2115 2115 HOH HOH . C 3 HOH A 116 2116 2116 HOH HOH . C 3 HOH A 117 2117 2117 HOH HOH . C 3 HOH A 118 2118 2118 HOH HOH . C 3 HOH A 119 2119 2119 HOH HOH . C 3 HOH A 120 2120 2120 HOH HOH . C 3 HOH A 121 2121 2121 HOH HOH . C 3 HOH A 122 2122 2122 HOH HOH . C 3 HOH A 123 2123 2123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 7X2 . . . B 2 15.695 11.776 11.06 1 37.65 ? C1 7X2 1888 A 1 HETATM 2 O O2 7X2 . . . B 2 14.416 11.771 10.43 1 39.4 ? O2 7X2 1888 A 1 HETATM 3 C C3 7X2 . . . B 2 13.744 10.586 10.478 1 39.45 ? C3 7X2 1888 A 1 HETATM 4 C C4 7X2 . . . B 2 14.24 9.425 11.045 1 39.73 ? C4 7X2 1888 A 1 HETATM 5 C C5 7X2 . . . B 2 13.457 8.259 11.025 1 39.72 ? C5 7X2 1888 A 1 HETATM 6 N N6 7X2 . . . B 2 13.967 7.103 11.6 1 37.91 ? N6 7X2 1888 A 1 HETATM 7 C C7 7X2 . . . B 2 13.306 5.92 11.861 1 35.38 ? C7 7X2 1888 A 1 HETATM 8 N N8 7X2 . . . B 2 14.065 4.904 12.279 1 32.98 ? N8 7X2 1888 A 1 HETATM 9 C C9 7X2 . . . B 2 13.558 3.725 12.596 1 30.3 ? C9 7X2 1888 A 1 HETATM 10 C C10 7X2 . . . B 2 12.209 3.554 12.452 1 33.96 ? C10 7X2 1888 A 1 HETATM 11 C C11 7X2 . . . B 2 11.4 4.626 12.003 1 33.81 ? C11 7X2 1888 A 1 HETATM 12 N N12 7X2 . . . B 2 10.015 4.478 11.849 1 32.55 ? N12 7X2 1888 A 1 HETATM 13 C C13 7X2 . . . B 2 9.331 3.305 12.241 1 35.4 ? C13 7X2 1888 A 1 HETATM 14 C C14 7X2 . . . B 2 9.241 2.939 13.595 1 35.7 ? C14 7X2 1888 A 1 HETATM 15 O O15 7X2 . . . B 2 9.716 3.571 14.71 1 33.69 ? O15 7X2 1888 A 1 HETATM 16 C C16 7X2 . . . B 2 9.672 2.569 15.746 1 33.42 ? C16 7X2 1888 A 1 HETATM 17 O O17 7X2 . . . B 2 8.624 1.657 15.349 1 35.95 ? O17 7X2 1888 A 1 HETATM 18 C C18 7X2 . . . B 2 8.58 1.767 13.977 1 36.12 ? C18 7X2 1888 A 1 HETATM 19 C C19 7X2 . . . B 2 8 0.939 13.014 1 36.19 ? C19 7X2 1888 A 1 HETATM 20 C C20 7X2 . . . B 2 8.11 1.287 11.655 1 35.77 ? C20 7X2 1888 A 1 HETATM 21 C C21 7X2 . . . B 2 8.748 2.468 11.282 1 36.03 ? C21 7X2 1888 A 1 HETATM 22 CL CL1 7X2 . . . B 2 8.873 2.907 9.613 1 37.42 ? CL1 7X2 1888 A 1 HETATM 23 N N23 7X2 . . . B 2 11.986 5.799 11.729 1 33.16 ? N23 7X2 1888 A 1 HETATM 24 C C24 7X2 . . . B 2 12.219 8.222 10.417 1 40.72 ? C24 7X2 1888 A 1 HETATM 25 C C25 7X2 . . . B 2 11.721 9.366 9.837 1 43.09 ? C25 7X2 1888 A 1 HETATM 26 O O26 7X2 . . . B 2 10.48 9.314 9.251 1 43.85 ? O26 7X2 1888 A 1 HETATM 27 C C27 7X2 . . . B 2 10.499 8.513 8.078 1 43.15 ? C27 7X2 1888 A 1 HETATM 28 C C28 7X2 . . . B 2 12.482 10.549 9.874 1 41.56 ? C28 7X2 1888 A 1 HETATM 29 O O29 7X2 . . . B 2 12.033 11.706 9.31 1 43.38 ? O29 7X2 1888 A 1 HETATM 30 C C30 7X2 . . . B 2 10.832 12.075 9.984 1 42.64 ? C30 7X2 1888 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 30 #