data_2VZI
#
_model_server_result.job_id            kUCgm1hAwUsGEbK9E8ZnDQ 
_model_server_result.datetime_utc      '2024-10-12 10:17:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2vzi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1376}' 
#
_entry.id    2VZI 
#
_exptl.entry_id    2VZI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2VZI 
_cell.length_a            75.42 
_cell.length_b            94.6 
_cell.length_c            42.17 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2VZI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 F N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     2VZI 
_atom_sites.fract_transf_matrix[1][1]    0.013259 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010571 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023714 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 PG4 B 1 1373 1373 PG4 PG4 . 
D 4 EDO B 1 1374 1374 EDO EDO . 
E 5 PGE B 1 1375 1375 PGE PGE . 
F 4 EDO B 1 1376 1376 EDO EDO . 
G 5 PGE B 1 1377 1377 PGE PGE . 
H 6 HOH B 1 2001 2001 HOH HOH . 
H 6 HOH B 2 2002 2002 HOH HOH . 
H 6 HOH B 3 2003 2003 HOH HOH . 
H 6 HOH B 4 2004 2004 HOH HOH . 
H 6 HOH B 5 2005 2005 HOH HOH . 
H 6 HOH B 6 2006 2006 HOH HOH . 
H 6 HOH B 7 2007 2007 HOH HOH . 
H 6 HOH B 8 2008 2008 HOH HOH . 
H 6 HOH B 9 2009 2009 HOH HOH . 
H 6 HOH B 10 2010 2010 HOH HOH . 
H 6 HOH B 11 2011 2011 HOH HOH . 
H 6 HOH B 12 2012 2012 HOH HOH . 
H 6 HOH B 13 2013 2013 HOH HOH . 
H 6 HOH B 14 2014 2014 HOH HOH . 
H 6 HOH B 15 2015 2015 HOH HOH . 
H 6 HOH B 16 2016 2016 HOH HOH . 
H 6 HOH B 17 2017 2017 HOH HOH . 
H 6 HOH B 18 2018 2018 HOH HOH . 
H 6 HOH B 19 2019 2019 HOH HOH . 
H 6 HOH B 20 2020 2020 HOH HOH . 
H 6 HOH B 21 2021 2021 HOH HOH . 
H 6 HOH B 22 2022 2022 HOH HOH . 
H 6 HOH B 23 2023 2023 HOH HOH . 
H 6 HOH B 24 2024 2024 HOH HOH . 
H 6 HOH B 25 2025 2025 HOH HOH . 
H 6 HOH B 26 2026 2026 HOH HOH . 
H 6 HOH B 27 2027 2027 HOH HOH . 
H 6 HOH B 28 2028 2028 HOH HOH . 
H 6 HOH B 29 2029 2029 HOH HOH . 
H 6 HOH B 30 2030 2030 HOH HOH . 
H 6 HOH B 31 2031 2031 HOH HOH . 
H 6 HOH B 32 2032 2032 HOH HOH . 
H 6 HOH B 33 2033 2033 HOH HOH . 
H 6 HOH B 34 2034 2034 HOH HOH . 
H 6 HOH B 35 2035 2035 HOH HOH . 
H 6 HOH B 36 2036 2036 HOH HOH . 
H 6 HOH B 37 2037 2037 HOH HOH . 
H 6 HOH B 38 2038 2038 HOH HOH . 
H 6 HOH B 39 2039 2039 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 4 19.645 -16.537 -0.015 1 25.75 ? C1 EDO 1376 B 1 
HETATM 2 O O1 EDO . . . F 4 20.774 -16.47 -0.867 1 25.58 ? O1 EDO 1376 B 1 
HETATM 3 C C2 EDO . . . F 4 18.793 -17.697 -0.479 1 25.87 ? C2 EDO 1376 B 1 
HETATM 4 O O2 EDO . . . F 4 17.622 -17.162 -1.082 1 23.23 ? O2 EDO 1376 B 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#