data_2W0H # _model_server_result.job_id lAtOrckhHOlDHI5xQKebZw _model_server_result.datetime_utc '2024-11-30 07:44:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2w0h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1486}' # _entry.id 2W0H # _exptl.entry_id 2W0H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2W0H _cell.length_a 102.945 _cell.length_b 102.945 _cell.length_c 193.129 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2W0H _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 2W0H _atom_sites.fract_transf_matrix[1][1] 0.009714 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009714 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005178 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 1486 1486 FAD FAD . D 3 SB A 1 1487 1487 SB SB . E 4 NDP A 1 1488 1488 NDP NDP . F 5 SO4 A 1 1489 1489 SO4 SO4 . G 2 FAD B 1 1486 1486 FAD FAD . H 3 SB B 1 1487 1487 SB SB . I 4 NDP B 1 1488 1488 NDP NDP . J 5 SO4 B 1 1489 1489 SO4 SO4 . K 6 HOH A 1 2001 2001 HOH HOH . K 6 HOH A 2 2002 2002 HOH HOH . K 6 HOH A 3 2003 2003 HOH HOH . K 6 HOH A 4 2004 2004 HOH HOH . K 6 HOH A 5 2005 2005 HOH HOH . K 6 HOH A 6 2006 2006 HOH HOH . K 6 HOH A 7 2007 2007 HOH HOH . K 6 HOH A 8 2008 2008 HOH HOH . K 6 HOH A 9 2009 2009 HOH HOH . K 6 HOH A 10 2010 2010 HOH HOH . K 6 HOH A 11 2011 2011 HOH HOH . K 6 HOH A 12 2012 2012 HOH HOH . L 6 HOH B 1 2001 2001 HOH HOH . L 6 HOH B 2 2002 2002 HOH HOH . L 6 HOH B 3 2003 2003 HOH HOH . L 6 HOH B 4 2004 2004 HOH HOH . L 6 HOH B 5 2005 2005 HOH HOH . L 6 HOH B 6 2006 2006 HOH HOH . L 6 HOH B 7 2007 2007 HOH HOH . L 6 HOH B 8 2008 2008 HOH HOH . L 6 HOH B 9 2009 2009 HOH HOH . L 6 HOH B 10 2010 2010 HOH HOH . L 6 HOH B 11 2011 2011 HOH HOH . L 6 HOH B 12 2012 2012 HOH HOH . L 6 HOH B 13 2013 2013 HOH HOH . L 6 HOH B 14 2014 2014 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 2 -4.741 19.989 7.956 1 61.88 ? PA FAD 1486 A 1 HETATM 2 O O1A FAD . . . C 2 -4.157 18.918 7.075 1 61.61 ? O1A FAD 1486 A 1 HETATM 3 O O2A FAD . . . C 2 -3.645 20.942 8.385 1 61.31 ? O2A FAD 1486 A 1 HETATM 4 O O5B FAD . . . C 2 -5.494 19.317 9.217 1 62.73 ? O5B FAD 1486 A 1 HETATM 5 C C5B FAD . . . C 2 -6.415 18.264 9.042 1 63.13 ? C5B FAD 1486 A 1 HETATM 6 C C4B FAD . . . C 2 -6.325 17.294 10.212 1 63.51 ? C4B FAD 1486 A 1 HETATM 7 O O4B FAD . . . C 2 -7.575 16.666 10.415 1 63.64 ? O4B FAD 1486 A 1 HETATM 8 C C3B FAD . . . C 2 -5.316 16.181 9.958 1 63.91 ? C3B FAD 1486 A 1 HETATM 9 O O3B FAD . . . C 2 -4.283 16.261 10.915 1 64.19 ? O3B FAD 1486 A 1 HETATM 10 C C2B FAD . . . C 2 -6.104 14.885 10.086 1 64.13 ? C2B FAD 1486 A 1 HETATM 11 O O2B FAD . . . C 2 -5.422 13.88 10.807 1 63.92 ? O2B FAD 1486 A 1 HETATM 12 C C1B FAD . . . C 2 -7.362 15.327 10.815 1 64.5 ? C1B FAD 1486 A 1 HETATM 13 N N9A FAD . . . C 2 -8.531 14.478 10.518 1 64.73 ? N9A FAD 1486 A 1 HETATM 14 C C8A FAD . . . C 2 -8.85 13.899 9.32 1 64.93 ? C8A FAD 1486 A 1 HETATM 15 N N7A FAD . . . C 2 -9.998 13.2 9.471 1 65.24 ? N7A FAD 1486 A 1 HETATM 16 C C5A FAD . . . C 2 -10.423 13.317 10.748 1 65.38 ? C5A FAD 1486 A 1 HETATM 17 C C6A FAD . . . C 2 -11.532 12.803 11.423 1 65.16 ? C6A FAD 1486 A 1 HETATM 18 N N6A FAD . . . C 2 -12.169 11.743 10.93 1 65.61 ? N6A FAD 1486 A 1 HETATM 19 N N1A FAD . . . C 2 -11.701 13.11 12.758 1 64.94 ? N1A FAD 1486 A 1 HETATM 20 C C2A FAD . . . C 2 -10.785 13.91 13.415 1 65.07 ? C2A FAD 1486 A 1 HETATM 21 N N3A FAD . . . C 2 -9.69 14.413 12.737 1 65.3 ? N3A FAD 1486 A 1 HETATM 22 C C4A FAD . . . C 2 -9.507 14.122 11.421 1 65.28 ? C4A FAD 1486 A 1 HETATM 23 N N1 FAD . . . C 2 0.505 24.936 2.058 1 55.55 ? N1 FAD 1486 A 1 HETATM 24 C C2 FAD . . . C 2 1.254 26.107 2.089 1 55.61 ? C2 FAD 1486 A 1 HETATM 25 O O2 FAD . . . C 2 0.741 27.195 2.352 1 55.59 ? O2 FAD 1486 A 1 HETATM 26 N N3 FAD . . . C 2 2.606 26.07 1.824 1 55.64 ? N3 FAD 1486 A 1 HETATM 27 C C4 FAD . . . C 2 3.217 24.873 1.523 1 55.52 ? C4 FAD 1486 A 1 HETATM 28 O O4 FAD . . . C 2 4.424 24.859 1.29 1 55.71 ? O4 FAD 1486 A 1 HETATM 29 C C4X FAD . . . C 2 2.476 23.696 1.49 1 55.51 ? C4X FAD 1486 A 1 HETATM 30 N N5 FAD . . . C 2 3.104 22.503 1.192 1 55.54 ? N5 FAD 1486 A 1 HETATM 31 C C5X FAD . . . C 2 2.398 21.322 1.153 1 55.47 ? C5X FAD 1486 A 1 HETATM 32 C C6 FAD . . . C 2 3.072 20.143 0.848 1 55.52 ? C6 FAD 1486 A 1 HETATM 33 C C7 FAD . . . C 2 2.382 18.935 0.799 1 55.6 ? C7 FAD 1486 A 1 HETATM 34 C C7M FAD . . . C 2 3.126 17.671 0.467 1 55.52 ? C7M FAD 1486 A 1 HETATM 35 C C8 FAD . . . C 2 1.01 18.921 1.06 1 55.61 ? C8 FAD 1486 A 1 HETATM 36 C C8M FAD . . . C 2 0.249 17.628 1.008 1 55.64 ? C8M FAD 1486 A 1 HETATM 37 C C9 FAD . . . C 2 0.336 20.108 1.367 1 55.5 ? C9 FAD 1486 A 1 HETATM 38 C C9A FAD . . . C 2 1.026 21.323 1.414 1 55.61 ? C9A FAD 1486 A 1 HETATM 39 N N10 FAD . . . C 2 0.383 22.524 1.722 1 55.91 ? N10 FAD 1486 A 1 HETATM 40 C C10 FAD . . . C 2 1.107 23.718 1.76 1 55.63 ? C10 FAD 1486 A 1 HETATM 41 C C1' FAD . . . C 2 -1.087 22.521 2.046 1 56.97 ? C1' FAD 1486 A 1 HETATM 42 C C2' FAD . . . C 2 -1.318 22.607 3.553 1 58.28 ? C2' FAD 1486 A 1 HETATM 43 O O2' FAD . . . C 2 -0.744 21.481 4.184 1 58.46 ? O2' FAD 1486 A 1 HETATM 44 C C3' FAD . . . C 2 -2.815 22.688 3.855 1 59.02 ? C3' FAD 1486 A 1 HETATM 45 O O3' FAD . . . C 2 -3.388 23.745 3.106 1 59.24 ? O3' FAD 1486 A 1 HETATM 46 C C4' FAD . . . C 2 -3.151 22.894 5.334 1 59.58 ? C4' FAD 1486 A 1 HETATM 47 O O4' FAD . . . C 2 -2.57 21.887 6.138 1 59.7 ? O4' FAD 1486 A 1 HETATM 48 C C5' FAD . . . C 2 -4.667 22.874 5.503 1 60.08 ? C5' FAD 1486 A 1 HETATM 49 O O5' FAD . . . C 2 -5.06 23.046 6.844 1 60.44 ? O5' FAD 1486 A 1 HETATM 50 P P FAD . . . C 2 -6.35 22.257 7.385 1 60.64 ? P FAD 1486 A 1 HETATM 51 O O1P FAD . . . C 2 -6.533 22.541 8.861 1 61.33 ? O1P FAD 1486 A 1 HETATM 52 O O2P FAD . . . C 2 -7.59 22.591 6.588 1 60.24 ? O2P FAD 1486 A 1 HETATM 53 O O3P FAD . . . C 2 -5.957 20.707 7.172 1 61.46 ? O3P FAD 1486 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 53 #