data_2W0H
#
_model_server_result.job_id            F86SsM_o_gi08VEssmHxvw 
_model_server_result.datetime_utc      '2024-12-02 12:08:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2w0h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1488}' 
#
_entry.id    2W0H 
#
_exptl.entry_id    2W0H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2W0H 
_cell.length_a            102.945 
_cell.length_b            102.945 
_cell.length_c            193.129 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2W0H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 I N N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 328 n n 
PA O2A NDP sing 329 n n 
PA O5B NDP sing 330 n n 
PA O3 NDP sing 331 n n 
O2A HOA2 NDP sing 332 n n 
O5B C5B NDP sing 333 n n 
C5B C4B NDP sing 334 n n 
C5B H51A NDP sing 335 n n 
C5B H52A NDP sing 336 n n 
C4B O4B NDP sing 337 n n 
C4B C3B NDP sing 338 n n 
C4B H4B NDP sing 339 n n 
O4B C1B NDP sing 340 n n 
C3B O3B NDP sing 341 n n 
C3B C2B NDP sing 342 n n 
C3B H3B NDP sing 343 n n 
O3B HO3A NDP sing 344 n n 
C2B O2B NDP sing 345 n n 
C2B C1B NDP sing 346 n n 
C2B H2B NDP sing 347 n n 
O2B P2B NDP sing 348 n n 
C1B N9A NDP sing 349 n n 
C1B H1B NDP sing 350 n n 
N9A C8A NDP sing 351 n y 
N9A C4A NDP sing 352 n y 
C8A N7A NDP doub 353 n y 
C8A H8A NDP sing 354 n n 
N7A C5A NDP sing 355 n y 
C5A C6A NDP sing 356 n y 
C5A C4A NDP doub 357 n y 
C6A N6A NDP sing 358 n n 
C6A N1A NDP doub 359 n y 
N6A H61A NDP sing 360 n n 
N6A H62A NDP sing 361 n n 
N1A C2A NDP sing 362 n y 
C2A N3A NDP doub 363 n y 
C2A H2A NDP sing 364 n n 
N3A C4A NDP sing 365 n y 
O3 PN NDP sing 366 n n 
PN O1N NDP doub 367 n n 
PN O2N NDP sing 368 n n 
PN O5D NDP sing 369 n n 
O2N H21N NDP sing 370 n n 
O5D C5D NDP sing 371 n n 
C5D C4D NDP sing 372 n n 
C5D H51N NDP sing 373 n n 
C5D H52N NDP sing 374 n n 
C4D O4D NDP sing 375 n n 
C4D C3D NDP sing 376 n n 
C4D H4D NDP sing 377 n n 
O4D C1D NDP sing 378 n n 
C3D O3D NDP sing 379 n n 
C3D C2D NDP sing 380 n n 
C3D H3D NDP sing 381 n n 
O3D HO3N NDP sing 382 n n 
C2D O2D NDP sing 383 n n 
C2D C1D NDP sing 384 n n 
C2D H2D NDP sing 385 n n 
O2D HO2N NDP sing 386 n n 
C1D N1N NDP sing 387 n n 
C1D H1D NDP sing 388 n n 
N1N C2N NDP sing 389 n n 
N1N C6N NDP sing 390 n n 
C2N C3N NDP doub 391 n n 
C2N H2N NDP sing 392 n n 
C3N C7N NDP sing 393 n n 
C3N C4N NDP sing 394 n n 
C7N O7N NDP doub 395 n n 
C7N N7N NDP sing 396 n n 
N7N H71N NDP sing 397 n n 
N7N H72N NDP sing 398 n n 
C4N C5N NDP sing 399 n n 
C4N H41N NDP sing 400 n n 
C4N H42N NDP sing 401 n n 
C5N C6N NDP doub 402 n n 
C5N H5N NDP sing 403 n n 
C6N H6N NDP sing 404 n n 
P2B O1X NDP doub 405 n n 
P2B O2X NDP sing 406 n n 
P2B O3X NDP sing 407 n n 
O2X HOP2 NDP sing 408 n n 
O3X HOP3 NDP sing 409 n n 
#
_atom_sites.entry_id                     2W0H 
_atom_sites.fract_transf_matrix[1][1]    0.009714 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009714 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005178 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 1486 1486 FAD FAD . 
D 3 SB A 1 1487 1487 SB SB . 
E 4 NDP A 1 1488 1488 NDP NDP . 
F 5 SO4 A 1 1489 1489 SO4 SO4 . 
G 2 FAD B 1 1486 1486 FAD FAD . 
H 3 SB B 1 1487 1487 SB SB . 
I 4 NDP B 1 1488 1488 NDP NDP . 
J 5 SO4 B 1 1489 1489 SO4 SO4 . 
K 6 HOH A 1 2001 2001 HOH HOH . 
K 6 HOH A 2 2002 2002 HOH HOH . 
K 6 HOH A 3 2003 2003 HOH HOH . 
K 6 HOH A 4 2004 2004 HOH HOH . 
K 6 HOH A 5 2005 2005 HOH HOH . 
K 6 HOH A 6 2006 2006 HOH HOH . 
K 6 HOH A 7 2007 2007 HOH HOH . 
K 6 HOH A 8 2008 2008 HOH HOH . 
K 6 HOH A 9 2009 2009 HOH HOH . 
K 6 HOH A 10 2010 2010 HOH HOH . 
K 6 HOH A 11 2011 2011 HOH HOH . 
K 6 HOH A 12 2012 2012 HOH HOH . 
L 6 HOH B 1 2001 2001 HOH HOH . 
L 6 HOH B 2 2002 2002 HOH HOH . 
L 6 HOH B 3 2003 2003 HOH HOH . 
L 6 HOH B 4 2004 2004 HOH HOH . 
L 6 HOH B 5 2005 2005 HOH HOH . 
L 6 HOH B 6 2006 2006 HOH HOH . 
L 6 HOH B 7 2007 2007 HOH HOH . 
L 6 HOH B 8 2008 2008 HOH HOH . 
L 6 HOH B 9 2009 2009 HOH HOH . 
L 6 HOH B 10 2010 2010 HOH HOH . 
L 6 HOH B 11 2011 2011 HOH HOH . 
L 6 HOH B 12 2012 2012 HOH HOH . 
L 6 HOH B 13 2013 2013 HOH HOH . 
L 6 HOH B 14 2014 2014 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . E 4 -2.539 20.286 -7.995 1 78.72 ? PA NDP 1488 A 1 
HETATM 2 O O1A NDP . . . E 4 -2.939 21.823 -7.943 1 78.76 ? O1A NDP 1488 A 1 
HETATM 3 O O2A NDP . . . E 4 -3.982 19.264 -7.75 1 79 ? O2A NDP 1488 A 1 
HETATM 4 O O5B NDP . . . E 4 -1.843 19.974 -9.415 1 78.72 ? O5B NDP 1488 A 1 
HETATM 5 C C5B NDP . . . E 4 -1.486 18.666 -9.868 1 77.97 ? C5B NDP 1488 A 1 
HETATM 6 C C4B NDP . . . E 4 -2.239 18.341 -11.154 1 77.34 ? C4B NDP 1488 A 1 
HETATM 7 O O4B NDP . . . E 4 -2.378 16.929 -11.286 1 77.31 ? O4B NDP 1488 A 1 
HETATM 8 C C3B NDP . . . E 4 -1.571 18.738 -12.466 1 76.9 ? C3B NDP 1488 A 1 
HETATM 9 O O3B NDP . . . E 4 -1.664 20.132 -12.773 1 76.74 ? O3B NDP 1488 A 1 
HETATM 10 C C2B NDP . . . E 4 -2.331 17.869 -13.453 1 76.65 ? C2B NDP 1488 A 1 
HETATM 11 O O2B NDP . . . E 4 -3.646 18.379 -13.679 1 75.73 ? O2B NDP 1488 A 1 
HETATM 12 C C1B NDP . . . E 4 -2.395 16.562 -12.672 1 76.78 ? C1B NDP 1488 A 1 
HETATM 13 N N9A NDP . . . E 4 -3.584 15.691 -12.88 1 76.65 ? N9A NDP 1488 A 1 
HETATM 14 C C8A NDP . . . E 4 -4.841 15.93 -12.457 1 76.53 ? C8A NDP 1488 A 1 
HETATM 15 N N7A NDP . . . E 4 -5.671 14.907 -12.783 1 76.49 ? N7A NDP 1488 A 1 
HETATM 16 C C5A NDP . . . E 4 -4.933 13.979 -13.417 1 76.51 ? C5A NDP 1488 A 1 
HETATM 17 C C6A NDP . . . E 4 -5.175 12.649 -14.029 1 76.67 ? C6A NDP 1488 A 1 
HETATM 18 N N6A NDP . . . E 4 -6.413 12.106 -14.021 1 76.81 ? N6A NDP 1488 A 1 
HETATM 19 N N1A NDP . . . E 4 -4.127 11.998 -14.595 1 76.65 ? N1A NDP 1488 A 1 
HETATM 20 C C2A NDP . . . E 4 -2.889 12.533 -14.609 1 76.69 ? C2A NDP 1488 A 1 
HETATM 21 N N3A NDP . . . E 4 -2.598 13.737 -14.069 1 76.95 ? N3A NDP 1488 A 1 
HETATM 22 C C4A NDP . . . E 4 -3.556 14.494 -13.469 1 76.6 ? C4A NDP 1488 A 1 
HETATM 23 O O3 NDP . . . E 4 -1.392 19.998 -6.89 1 79.39 ? O3 NDP 1488 A 1 
HETATM 24 P PN NDP . . . E 4 -1.18 18.575 -6.143 1 79.79 ? PN NDP 1488 A 1 
HETATM 25 O O1N NDP . . . E 4 -2.028 17.399 -6.79 1 79.76 ? O1N NDP 1488 A 1 
HETATM 26 O O2N NDP . . . E 4 0.549 18.163 -6.238 1 79.68 ? O2N NDP 1488 A 1 
HETATM 27 O O5D NDP . . . E 4 -1.67 18.803 -4.626 1 80.27 ? O5D NDP 1488 A 1 
HETATM 28 C C5D NDP . . . E 4 -2.715 19.722 -4.293 1 81.26 ? C5D NDP 1488 A 1 
HETATM 29 C C4D NDP . . . E 4 -2.033 21.029 -3.901 1 81.9 ? C4D NDP 1488 A 1 
HETATM 30 O O4D NDP . . . E 4 -2.036 21.287 -2.49 1 81.82 ? O4D NDP 1488 A 1 
HETATM 31 C C3D NDP . . . E 4 -2.557 22.305 -4.55 1 82.2 ? C3D NDP 1488 A 1 
HETATM 32 O O3D NDP . . . E 4 -3.983 22.293 -4.689 1 82.15 ? O3D NDP 1488 A 1 
HETATM 33 C C2D NDP . . . E 4 -2.103 23.376 -3.57 1 82.6 ? C2D NDP 1488 A 1 
HETATM 34 O O2D NDP . . . E 4 -3.185 24.264 -3.263 1 82.98 ? O2D NDP 1488 A 1 
HETATM 35 C C1D NDP . . . E 4 -1.578 22.636 -2.329 1 82.34 ? C1D NDP 1488 A 1 
HETATM 36 N N1N NDP . . . E 4 -0.094 22.669 -2.248 1 82.32 ? N1N NDP 1488 A 1 
HETATM 37 C C2N NDP . . . E 4 0.568 23.834 -2.089 1 82.39 ? C2N NDP 1488 A 1 
HETATM 38 C C3N NDP . . . E 4 1.968 23.898 -2.012 1 82.45 ? C3N NDP 1488 A 1 
HETATM 39 C C7N NDP . . . E 4 2.668 25.22 -1.835 1 82.48 ? C7N NDP 1488 A 1 
HETATM 40 O O7N NDP . . . E 4 2.028 26.218 -1.541 1 82.65 ? O7N NDP 1488 A 1 
HETATM 41 N N7N NDP . . . E 4 3.989 25.276 -2.004 1 82.58 ? N7N NDP 1488 A 1 
HETATM 42 C C4N NDP . . . E 4 2.815 22.645 -2.106 1 82.25 ? C4N NDP 1488 A 1 
HETATM 43 C C5N NDP . . . E 4 1.992 21.453 -2.274 1 82.29 ? C5N NDP 1488 A 1 
HETATM 44 C C6N NDP . . . E 4 0.601 21.516 -2.333 1 82.32 ? C6N NDP 1488 A 1 
HETATM 45 P P2B NDP . . . E 4 -4.004 19.337 -14.925 1 74.88 ? P2B NDP 1488 A 1 
HETATM 46 O O1X NDP . . . E 4 -3.95 18.48 -16.261 1 75.36 ? O1X NDP 1488 A 1 
HETATM 47 O O2X NDP . . . E 4 -2.861 20.701 -15.049 1 75 ? O2X NDP 1488 A 1 
HETATM 48 O O3X NDP . . . E 4 -5.638 20 -14.701 1 74.66 ? O3X NDP 1488 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           48 
#