data_2W2E # _model_server_result.job_id TU2eUKDbXyOuBd0AXw_C6Q _model_server_result.datetime_utc '2024-11-13 06:26:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2w2e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1278}' # _entry.id 2W2E # _exptl.entry_id 2W2E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 292.369 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'octyl beta-D-glucopyranoside' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2W2E _cell.length_a 91.447 _cell.length_b 91.447 _cell.length_c 80.819 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2W2E _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 91.447 0 0 3 'crystal symmetry operation' 4_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 91.447 0 4 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 91.447 91.447 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # _chem_comp.formula 'C14 H28 O6' _chem_comp.formula_weight 292.369 _chem_comp.id BOG _chem_comp.mon_nstd_flag n _chem_comp.name 'octyl beta-D-glucopyranoside' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BOG sing 70 n n C1 C2 BOG sing 71 n n C1 O5 BOG sing 72 n n C1 H1 BOG sing 73 n n O1 C1' BOG sing 74 n n C2 O2 BOG sing 75 n n C2 C3 BOG sing 76 n n C2 H2 BOG sing 77 n n O2 HO2 BOG sing 78 n n C3 O3 BOG sing 79 n n C3 C4 BOG sing 80 n n C3 H3 BOG sing 81 n n O3 HO3 BOG sing 82 n n C4 O4 BOG sing 83 n n C4 C5 BOG sing 84 n n C4 H4 BOG sing 85 n n O4 HO4 BOG sing 86 n n C5 O5 BOG sing 87 n n C5 C6 BOG sing 88 n n C5 H5 BOG sing 89 n n C6 O6 BOG sing 90 n n C6 H61 BOG sing 91 n n C6 H62 BOG sing 92 n n O6 HO6 BOG sing 93 n n C1' C2' BOG sing 94 n n C1' "H1'1" BOG sing 95 n n C1' "H1'2" BOG sing 96 n n C2' C3' BOG sing 97 n n C2' "H2'1" BOG sing 98 n n C2' "H2'2" BOG sing 99 n n C3' C4' BOG sing 100 n n C3' "H3'1" BOG sing 101 n n C3' "H3'2" BOG sing 102 n n C4' C5' BOG sing 103 n n C4' "H4'1" BOG sing 104 n n C4' "H4'2" BOG sing 105 n n C5' C6' BOG sing 106 n n C5' "H5'1" BOG sing 107 n n C5' "H5'2" BOG sing 108 n n C6' C7' BOG sing 109 n n C6' "H6'1" BOG sing 110 n n C6' "H6'2" BOG sing 111 n n C7' C8' BOG sing 112 n n C7' "H7'1" BOG sing 113 n n C7' "H7'2" BOG sing 114 n n C8' "H8'1" BOG sing 115 n n C8' "H8'2" BOG sing 116 n n C8' "H8'3" BOG sing 117 n n # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.identifier b-octylglucoside _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 2W2E _atom_sites.fract_transf_matrix[1][1] 0.010935 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010935 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012373 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BOG A 1 1274 1274 BOG BOG . C 2 BOG A 1 1275 1275 BOG BOG . D 2 BOG A 1 1276 1276 BOG BOG . E 2 BOG A 1 1277 1277 BOG BOG . F 2 BOG A 1 1278 1278 BOG BOG . G 2 BOG A 1 1279 1279 BOG BOG . H 3 CL A 1 1280 1280 CL CL . I 3 CL A 1 1281 1281 CL CL . J 3 CL A 1 1282 1282 CL CL . K 4 HOH A 1 2001 2001 HOH HOH . K 4 HOH A 2 2002 2002 HOH HOH . K 4 HOH A 3 2003 2003 HOH HOH . K 4 HOH A 4 2004 2004 HOH HOH . K 4 HOH A 5 2005 2005 HOH HOH . K 4 HOH A 6 2006 2006 HOH HOH . K 4 HOH A 7 2007 2007 HOH HOH . K 4 HOH A 8 2008 2008 HOH HOH . K 4 HOH A 9 2009 2009 HOH HOH . K 4 HOH A 10 2010 2010 HOH HOH . K 4 HOH A 11 2011 2011 HOH HOH . K 4 HOH A 12 2012 2012 HOH HOH . K 4 HOH A 13 2013 2013 HOH HOH . K 4 HOH A 14 2014 2014 HOH HOH . K 4 HOH A 15 2015 2015 HOH HOH . K 4 HOH A 16 2016 2016 HOH HOH . K 4 HOH A 17 2017 2017 HOH HOH . K 4 HOH A 18 2018 2018 HOH HOH . K 4 HOH A 19 2019 2019 HOH HOH . K 4 HOH A 20 2020 2020 HOH HOH . K 4 HOH A 21 2021 2021 HOH HOH . K 4 HOH A 22 2022 2022 HOH HOH . K 4 HOH A 23 2023 2023 HOH HOH . K 4 HOH A 24 2024 2024 HOH HOH . K 4 HOH A 25 2025 2025 HOH HOH . K 4 HOH A 26 2026 2026 HOH HOH . K 4 HOH A 27 2027 2027 HOH HOH . K 4 HOH A 28 2028 2028 HOH HOH . K 4 HOH A 29 2029 2029 HOH HOH . K 4 HOH A 30 2030 2030 HOH HOH . K 4 HOH A 31 2031 2031 HOH HOH . K 4 HOH A 32 2032 2032 HOH HOH . K 4 HOH A 33 2033 2033 HOH HOH . K 4 HOH A 34 2034 2034 HOH HOH . K 4 HOH A 35 2035 2035 HOH HOH . K 4 HOH A 36 2036 2036 HOH HOH . K 4 HOH A 37 2037 2037 HOH HOH . K 4 HOH A 38 2038 2038 HOH HOH . K 4 HOH A 39 2039 2039 HOH HOH . K 4 HOH A 40 2040 2040 HOH HOH . K 4 HOH A 41 2041 2041 HOH HOH . K 4 HOH A 42 2042 2042 HOH HOH . K 4 HOH A 43 2043 2043 HOH HOH . K 4 HOH A 44 2044 2044 HOH HOH . K 4 HOH A 45 2045 2045 HOH HOH . K 4 HOH A 46 2046 2046 HOH HOH . K 4 HOH A 47 2047 2047 HOH HOH . K 4 HOH A 48 2048 2048 HOH HOH . K 4 HOH A 49 2049 2049 HOH HOH . K 4 HOH A 50 2050 2050 HOH HOH . K 4 HOH A 51 2051 2051 HOH HOH . K 4 HOH A 52 2052 2052 HOH HOH . K 4 HOH A 53 2053 2053 HOH HOH . K 4 HOH A 54 2054 2054 HOH HOH . K 4 HOH A 55 2055 2055 HOH HOH . K 4 HOH A 56 2056 2056 HOH HOH . K 4 HOH A 57 2057 2057 HOH HOH . K 4 HOH A 58 2058 2058 HOH HOH . K 4 HOH A 59 2059 2059 HOH HOH . K 4 HOH A 60 2060 2060 HOH HOH . K 4 HOH A 61 2061 2061 HOH HOH . K 4 HOH A 62 2062 2062 HOH HOH . K 4 HOH A 63 2063 2063 HOH HOH . K 4 HOH A 64 2064 2064 HOH HOH . K 4 HOH A 65 2065 2065 HOH HOH . K 4 HOH A 66 2066 2066 HOH HOH . K 4 HOH A 67 2067 2067 HOH HOH . K 4 HOH A 68 2068 2068 HOH HOH . K 4 HOH A 69 2069 2069 HOH HOH . K 4 HOH A 70 2070 2070 HOH HOH . K 4 HOH A 71 2071 2071 HOH HOH . K 4 HOH A 72 2072 2072 HOH HOH . K 4 HOH A 73 2073 2073 HOH HOH . K 4 HOH A 74 2074 2074 HOH HOH . K 4 HOH A 75 2075 2075 HOH HOH . K 4 HOH A 76 2076 2076 HOH HOH . K 4 HOH A 77 2077 2077 HOH HOH . K 4 HOH A 78 2078 2078 HOH HOH . K 4 HOH A 79 2079 2079 HOH HOH . K 4 HOH A 80 2080 2080 HOH HOH . K 4 HOH A 81 2081 2081 HOH HOH . K 4 HOH A 82 2082 2082 HOH HOH . K 4 HOH A 83 2083 2083 HOH HOH . K 4 HOH A 84 2084 2084 HOH HOH . K 4 HOH A 85 2085 2085 HOH HOH . K 4 HOH A 86 2086 2086 HOH HOH . K 4 HOH A 87 2087 2087 HOH HOH . K 4 HOH A 88 2088 2088 HOH HOH . K 4 HOH A 89 2089 2089 HOH HOH . K 4 HOH A 90 2090 2090 HOH HOH . K 4 HOH A 91 2091 2091 HOH HOH . K 4 HOH A 92 2092 2092 HOH HOH . K 4 HOH A 93 2093 2093 HOH HOH . K 4 HOH A 94 2094 2094 HOH HOH . K 4 HOH A 95 2095 2095 HOH HOH . K 4 HOH A 96 2096 2096 HOH HOH . K 4 HOH A 97 2097 2097 HOH HOH . K 4 HOH A 98 2098 2098 HOH HOH . K 4 HOH A 99 2099 2099 HOH HOH . K 4 HOH A 100 2100 2100 HOH HOH . K 4 HOH A 101 2101 2101 HOH HOH . K 4 HOH A 102 2102 2102 HOH HOH . K 4 HOH A 103 2103 2103 HOH HOH . K 4 HOH A 104 2104 2104 HOH HOH . K 4 HOH A 105 2105 2105 HOH HOH . K 4 HOH A 106 2106 2106 HOH HOH . K 4 HOH A 107 2107 2107 HOH HOH . K 4 HOH A 108 2108 2108 HOH HOH . K 4 HOH A 109 2109 2109 HOH HOH . K 4 HOH A 110 2110 2110 HOH HOH . K 4 HOH A 111 2111 2111 HOH HOH . K 4 HOH A 112 2112 2112 HOH HOH . K 4 HOH A 113 2113 2113 HOH HOH . K 4 HOH A 114 2114 2114 HOH HOH . K 4 HOH A 115 2115 2115 HOH HOH . K 4 HOH A 116 2116 2116 HOH HOH . K 4 HOH A 117 2117 2117 HOH HOH . K 4 HOH A 118 2118 2118 HOH HOH . K 4 HOH A 119 2119 2119 HOH HOH . K 4 HOH A 120 2120 2120 HOH HOH . K 4 HOH A 121 2121 2121 HOH HOH . K 4 HOH A 122 2122 2122 HOH HOH . K 4 HOH A 123 2123 2123 HOH HOH . K 4 HOH A 124 2124 2124 HOH HOH . K 4 HOH A 125 2125 2125 HOH HOH . K 4 HOH A 126 2126 2126 HOH HOH . K 4 HOH A 127 2127 2127 HOH HOH . K 4 HOH A 128 2128 2128 HOH HOH . K 4 HOH A 129 2129 2129 HOH HOH . K 4 HOH A 130 2130 2130 HOH HOH . K 4 HOH A 131 2131 2131 HOH HOH . K 4 HOH A 132 2132 2132 HOH HOH . K 4 HOH A 133 2133 2133 HOH HOH . K 4 HOH A 134 2134 2134 HOH HOH . K 4 HOH A 135 2135 2135 HOH HOH . K 4 HOH A 136 2136 2136 HOH HOH . K 4 HOH A 137 2137 2137 HOH HOH . K 4 HOH A 138 2138 2138 HOH HOH . K 4 HOH A 139 2139 2139 HOH HOH . K 4 HOH A 140 2140 2140 HOH HOH . K 4 HOH A 141 2141 2141 HOH HOH . K 4 HOH A 142 2142 2142 HOH HOH . K 4 HOH A 143 2143 2143 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BOG . . . F 2 14.899 49.595 -6.633 0.5 30.83 ? C1 BOG 1278 A 1 HETATM 2 O O1 BOG . . . F 2 15.511 49.681 -5.3 0.5 31.72 ? O1 BOG 1278 A 1 HETATM 3 C C2 BOG . . . F 2 15.762 50.498 -7.566 1 32.09 ? C2 BOG 1278 A 1 HETATM 4 O O2 BOG . . . F 2 15.709 51.732 -6.938 0.5 24.72 ? O2 BOG 1278 A 1 HETATM 5 C C3 BOG . . . F 2 14.895 50.644 -8.828 0.5 34.56 ? C3 BOG 1278 A 1 HETATM 6 O O3 BOG . . . F 2 15.013 51.758 -9.744 0.5 41.52 ? O3 BOG 1278 A 1 HETATM 7 C C4 BOG . . . F 2 14.802 49.23 -9.396 0.5 35.57 ? C4 BOG 1278 A 1 HETATM 8 O O4 BOG . . . F 2 14.013 49.21 -10.568 0.5 34.35 ? O4 BOG 1278 A 1 HETATM 9 C C5 BOG . . . F 2 14.089 48.342 -8.378 0.5 33.81 ? C5 BOG 1278 A 1 HETATM 10 O O5 BOG . . . F 2 14.88 48.308 -7.206 0.5 30 ? O5 BOG 1278 A 1 HETATM 11 C C6 BOG . . . F 2 13.911 46.895 -8.872 0.5 38.17 ? C6 BOG 1278 A 1 HETATM 12 O O6 BOG . . . F 2 13.645 46.14 -7.704 0.5 47.07 ? O6 BOG 1278 A 1 HETATM 13 C C1' BOG . . . F 2 14.875 49.196 -4.099 0.5 31.17 ? C1' BOG 1278 A 1 HETATM 14 C C2' BOG . . . F 2 15.875 49.215 -2.9 0.5 26.63 ? C2' BOG 1278 A 1 HETATM 15 C C3' BOG . . . F 2 16.004 47.991 -1.94 0.5 32.49 ? C3' BOG 1278 A 1 HETATM 16 C C4' BOG . . . F 2 15.309 48.041 -0.583 0.5 30.1 ? C4' BOG 1278 A 1 HETATM 17 C C5' BOG . . . F 2 16.209 47.717 0.604 0.5 29.41 ? C5' BOG 1278 A 1 HETATM 18 C C6' BOG . . . F 2 15.582 47.509 1.984 0.5 30.86 ? C6' BOG 1278 A 1 HETATM 19 C C7' BOG . . . F 2 16.605 46.77 2.807 0.5 32.85 ? C7' BOG 1278 A 1 HETATM 20 C C8' BOG . . . F 2 16.464 46.989 4.289 0.5 39.66 ? C8' BOG 1278 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 220 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 20 #