data_2W3W # _model_server_result.job_id n9WLcaHMSKi7llA5gki_SA _model_server_result.datetime_utc '2024-10-19 21:46:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2w3w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1169}' # _entry.id 2W3W # _exptl.entry_id 2W3W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2W3W _cell.length_a 36.729 _cell.length_b 53.965 _cell.length_c 81.191 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2W3W _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 237 n n PA O2A NDP sing 238 n n PA O5B NDP sing 239 n n PA O3 NDP sing 240 n n O2A HOA2 NDP sing 241 n n O5B C5B NDP sing 242 n n C5B C4B NDP sing 243 n n C5B H51A NDP sing 244 n n C5B H52A NDP sing 245 n n C4B O4B NDP sing 246 n n C4B C3B NDP sing 247 n n C4B H4B NDP sing 248 n n O4B C1B NDP sing 249 n n C3B O3B NDP sing 250 n n C3B C2B NDP sing 251 n n C3B H3B NDP sing 252 n n O3B HO3A NDP sing 253 n n C2B O2B NDP sing 254 n n C2B C1B NDP sing 255 n n C2B H2B NDP sing 256 n n O2B P2B NDP sing 257 n n C1B N9A NDP sing 258 n n C1B H1B NDP sing 259 n n N9A C8A NDP sing 260 n y N9A C4A NDP sing 261 n y C8A N7A NDP doub 262 n y C8A H8A NDP sing 263 n n N7A C5A NDP sing 264 n y C5A C6A NDP sing 265 n y C5A C4A NDP doub 266 n y C6A N6A NDP sing 267 n n C6A N1A NDP doub 268 n y N6A H61A NDP sing 269 n n N6A H62A NDP sing 270 n n N1A C2A NDP sing 271 n y C2A N3A NDP doub 272 n y C2A H2A NDP sing 273 n n N3A C4A NDP sing 274 n y O3 PN NDP sing 275 n n PN O1N NDP doub 276 n n PN O2N NDP sing 277 n n PN O5D NDP sing 278 n n O2N H21N NDP sing 279 n n O5D C5D NDP sing 280 n n C5D C4D NDP sing 281 n n C5D H51N NDP sing 282 n n C5D H52N NDP sing 283 n n C4D O4D NDP sing 284 n n C4D C3D NDP sing 285 n n C4D H4D NDP sing 286 n n O4D C1D NDP sing 287 n n C3D O3D NDP sing 288 n n C3D C2D NDP sing 289 n n C3D H3D NDP sing 290 n n O3D HO3N NDP sing 291 n n C2D O2D NDP sing 292 n n C2D C1D NDP sing 293 n n C2D H2D NDP sing 294 n n O2D HO2N NDP sing 295 n n C1D N1N NDP sing 296 n n C1D H1D NDP sing 297 n n N1N C2N NDP sing 298 n n N1N C6N NDP sing 299 n n C2N C3N NDP doub 300 n n C2N H2N NDP sing 301 n n C3N C7N NDP sing 302 n n C3N C4N NDP sing 303 n n C7N O7N NDP doub 304 n n C7N N7N NDP sing 305 n n N7N H71N NDP sing 306 n n N7N H72N NDP sing 307 n n C4N C5N NDP sing 308 n n C4N H41N NDP sing 309 n n C4N H42N NDP sing 310 n n C5N C6N NDP doub 311 n n C5N H5N NDP sing 312 n n C6N H6N NDP sing 313 n n P2B O1X NDP doub 314 n n P2B O2X NDP sing 315 n n P2B O3X NDP sing 316 n n O2X HOP2 NDP sing 317 n n O3X HOP3 NDP sing 318 n n # _atom_sites.entry_id 2W3W _atom_sites.fract_transf_matrix[1][1] 0.027226 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018531 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012317 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VG9 A 1 1168 1168 VG9 VG9 . C 3 NDP A 1 1169 1169 NDP NDP . D 4 HOH A 1 2001 2001 HOH HOH . D 4 HOH A 2 2002 2002 HOH HOH . D 4 HOH A 3 2003 2003 HOH HOH . D 4 HOH A 4 2004 2004 HOH HOH . D 4 HOH A 5 2005 2005 HOH HOH . D 4 HOH A 6 2006 2006 HOH HOH . D 4 HOH A 7 2007 2007 HOH HOH . D 4 HOH A 8 2008 2008 HOH HOH . D 4 HOH A 9 2009 2009 HOH HOH . D 4 HOH A 10 2010 2010 HOH HOH . D 4 HOH A 11 2011 2011 HOH HOH . D 4 HOH A 12 2012 2012 HOH HOH . D 4 HOH A 13 2013 2013 HOH HOH . D 4 HOH A 14 2014 2014 HOH HOH . D 4 HOH A 15 2015 2015 HOH HOH . D 4 HOH A 16 2016 2016 HOH HOH . D 4 HOH A 17 2017 2017 HOH HOH . D 4 HOH A 18 2018 2018 HOH HOH . D 4 HOH A 19 2019 2019 HOH HOH . D 4 HOH A 20 2020 2020 HOH HOH . D 4 HOH A 21 2021 2021 HOH HOH . D 4 HOH A 22 2022 2022 HOH HOH . D 4 HOH A 23 2023 2023 HOH HOH . D 4 HOH A 24 2024 2024 HOH HOH . D 4 HOH A 25 2025 2025 HOH HOH . D 4 HOH A 26 2026 2026 HOH HOH . D 4 HOH A 27 2027 2027 HOH HOH . D 4 HOH A 28 2028 2028 HOH HOH . D 4 HOH A 29 2029 2029 HOH HOH . D 4 HOH A 30 2030 2030 HOH HOH . D 4 HOH A 31 2031 2031 HOH HOH . D 4 HOH A 32 2032 2032 HOH HOH . D 4 HOH A 33 2033 2033 HOH HOH . D 4 HOH A 34 2034 2034 HOH HOH . D 4 HOH A 35 2035 2035 HOH HOH . D 4 HOH A 36 2036 2036 HOH HOH . D 4 HOH A 37 2037 2037 HOH HOH . D 4 HOH A 38 2038 2038 HOH HOH . D 4 HOH A 39 2039 2039 HOH HOH . D 4 HOH A 40 2040 2040 HOH HOH . D 4 HOH A 41 2041 2041 HOH HOH . D 4 HOH A 42 2042 2042 HOH HOH . D 4 HOH A 43 2043 2043 HOH HOH . D 4 HOH A 44 2044 2044 HOH HOH . D 4 HOH A 45 2045 2045 HOH HOH . D 4 HOH A 46 2046 2046 HOH HOH . D 4 HOH A 47 2047 2047 HOH HOH . D 4 HOH A 48 2048 2048 HOH HOH . D 4 HOH A 49 2049 2049 HOH HOH . D 4 HOH A 50 2050 2050 HOH HOH . D 4 HOH A 51 2051 2051 HOH HOH . D 4 HOH A 52 2052 2052 HOH HOH . D 4 HOH A 53 2053 2053 HOH HOH . D 4 HOH A 54 2054 2054 HOH HOH . D 4 HOH A 55 2055 2055 HOH HOH . D 4 HOH A 56 2056 2056 HOH HOH . D 4 HOH A 57 2057 2057 HOH HOH . D 4 HOH A 58 2058 2058 HOH HOH . D 4 HOH A 59 2059 2059 HOH HOH . D 4 HOH A 60 2060 2060 HOH HOH . D 4 HOH A 61 2061 2061 HOH HOH . D 4 HOH A 62 2062 2062 HOH HOH . D 4 HOH A 63 2063 2063 HOH HOH . D 4 HOH A 64 2064 2064 HOH HOH . D 4 HOH A 65 2065 2065 HOH HOH . D 4 HOH A 66 2066 2066 HOH HOH . D 4 HOH A 67 2067 2067 HOH HOH . D 4 HOH A 68 2068 2068 HOH HOH . D 4 HOH A 69 2069 2069 HOH HOH . D 4 HOH A 70 2070 2070 HOH HOH . D 4 HOH A 71 2071 2071 HOH HOH . D 4 HOH A 72 2072 2072 HOH HOH . D 4 HOH A 73 2073 2073 HOH HOH . D 4 HOH A 74 2074 2074 HOH HOH . D 4 HOH A 75 2075 2075 HOH HOH . D 4 HOH A 76 2076 2076 HOH HOH . D 4 HOH A 77 2077 2077 HOH HOH . D 4 HOH A 78 2078 2078 HOH HOH . D 4 HOH A 79 2079 2079 HOH HOH . D 4 HOH A 80 2080 2080 HOH HOH . D 4 HOH A 81 2081 2081 HOH HOH . D 4 HOH A 82 2082 2082 HOH HOH . D 4 HOH A 83 2083 2083 HOH HOH . D 4 HOH A 84 2084 2084 HOH HOH . D 4 HOH A 85 2085 2085 HOH HOH . D 4 HOH A 86 2086 2086 HOH HOH . D 4 HOH A 87 2087 2087 HOH HOH . D 4 HOH A 88 2088 2088 HOH HOH . D 4 HOH A 89 2089 2089 HOH HOH . D 4 HOH A 90 2090 2090 HOH HOH . D 4 HOH A 91 2091 2091 HOH HOH . D 4 HOH A 92 2092 2092 HOH HOH . D 4 HOH A 93 2093 2093 HOH HOH . D 4 HOH A 94 2094 2094 HOH HOH . D 4 HOH A 95 2095 2095 HOH HOH . D 4 HOH A 96 2096 2096 HOH HOH . D 4 HOH A 97 2097 2097 HOH HOH . D 4 HOH A 98 2098 2098 HOH HOH . D 4 HOH A 99 2099 2099 HOH HOH . D 4 HOH A 100 2100 2100 HOH HOH . D 4 HOH A 101 2101 2101 HOH HOH . D 4 HOH A 102 2102 2102 HOH HOH . D 4 HOH A 103 2103 2103 HOH HOH . D 4 HOH A 104 2104 2104 HOH HOH . D 4 HOH A 105 2105 2105 HOH HOH . D 4 HOH A 106 2106 2106 HOH HOH . D 4 HOH A 107 2107 2107 HOH HOH . D 4 HOH A 108 2108 2108 HOH HOH . D 4 HOH A 109 2109 2109 HOH HOH . D 4 HOH A 110 2110 2110 HOH HOH . D 4 HOH A 111 2111 2111 HOH HOH . D 4 HOH A 112 2112 2112 HOH HOH . D 4 HOH A 113 2113 2113 HOH HOH . D 4 HOH A 114 2114 2114 HOH HOH . D 4 HOH A 115 2115 2115 HOH HOH . D 4 HOH A 116 2116 2116 HOH HOH . D 4 HOH A 117 2117 2117 HOH HOH . D 4 HOH A 118 2118 2118 HOH HOH . D 4 HOH A 119 2119 2119 HOH HOH . D 4 HOH A 120 2120 2120 HOH HOH . D 4 HOH A 121 2121 2121 HOH HOH . D 4 HOH A 122 2122 2122 HOH HOH . D 4 HOH A 123 2123 2123 HOH HOH . D 4 HOH A 124 2124 2124 HOH HOH . D 4 HOH A 125 2125 2125 HOH HOH . D 4 HOH A 126 2126 2126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . C 3 21.239 4.962 52.62 1 11.94 ? PA NDP 1169 A 1 HETATM 2 O O1A NDP . . . C 3 20.797 3.579 52.885 1 12.14 ? O1A NDP 1169 A 1 HETATM 3 O O2A NDP . . . C 3 20.332 5.843 51.845 1 13.46 ? O2A NDP 1169 A 1 HETATM 4 O O5B NDP . . . C 3 21.604 5.774 53.949 1 12.57 ? O5B NDP 1169 A 1 HETATM 5 C C5B NDP . . . C 3 22.501 5.164 54.846 1 11.09 ? C5B NDP 1169 A 1 HETATM 6 C C4B NDP . . . C 3 22.427 5.941 56.163 1 12 ? C4B NDP 1169 A 1 HETATM 7 O O4B NDP . . . C 3 21.255 5.479 56.834 1 14.73 ? O4B NDP 1169 A 1 HETATM 8 C C3B NDP . . . C 3 23.572 5.771 57.171 1 13.6 ? C3B NDP 1169 A 1 HETATM 9 O O3B NDP . . . C 3 24.63 6.664 56.802 1 17.64 ? O3B NDP 1169 A 1 HETATM 10 C C2B NDP . . . C 3 22.818 6.177 58.42 1 13.52 ? C2B NDP 1169 A 1 HETATM 11 O O2B NDP . . . C 3 22.635 7.583 58.516 1 13.76 ? O2B NDP 1169 A 1 HETATM 12 C C1B NDP . . . C 3 21.427 5.54 58.214 1 16.62 ? C1B NDP 1169 A 1 HETATM 13 N N9A NDP . . . C 3 21.378 4.191 58.794 1 15.55 ? N9A NDP 1169 A 1 HETATM 14 C C8A NDP . . . C 3 21.9 3.039 58.275 1 19.88 ? C8A NDP 1169 A 1 HETATM 15 N N7A NDP . . . C 3 21.659 2.033 59.143 1 19.72 ? N7A NDP 1169 A 1 HETATM 16 C C5A NDP . . . C 3 20.984 2.552 60.204 1 17.94 ? C5A NDP 1169 A 1 HETATM 17 C C6A NDP . . . C 3 20.481 1.995 61.346 1 20.13 ? C6A NDP 1169 A 1 HETATM 18 N N6A NDP . . . C 3 20.737 0.698 61.615 1 24.25 ? N6A NDP 1169 A 1 HETATM 19 N N1A NDP . . . C 3 19.823 2.783 62.251 1 19.88 ? N1A NDP 1169 A 1 HETATM 20 C C2A NDP . . . C 3 19.636 4.125 62.007 1 19.56 ? C2A NDP 1169 A 1 HETATM 21 N N3A NDP . . . C 3 20.148 4.667 60.846 1 15.01 ? N3A NDP 1169 A 1 HETATM 22 C C4A NDP . . . C 3 20.79 3.899 59.976 1 16.19 ? C4A NDP 1169 A 1 HETATM 23 O O3 NDP . . . C 3 22.684 5.031 51.881 1 13.4 ? O3 NDP 1169 A 1 HETATM 24 P PN NDP . . . C 3 23.421 4.068 50.84 1 16.48 ? PN NDP 1169 A 1 HETATM 25 O O1N NDP . . . C 3 23.406 2.669 51.237 1 17.44 ? O1N NDP 1169 A 1 HETATM 26 O O2N NDP . . . C 3 24.757 4.717 50.576 1 19.34 ? O2N NDP 1169 A 1 HETATM 27 O O5D NDP . . . C 3 22.573 4.322 49.514 1 14.94 ? O5D NDP 1169 A 1 HETATM 28 C C5D NDP . . . C 3 22.451 5.551 48.806 1 13.55 ? C5D NDP 1169 A 1 HETATM 29 C C4D NDP . . . C 3 22.809 5.319 47.349 1 17.42 ? C4D NDP 1169 A 1 HETATM 30 O O4D NDP . . . C 3 21.714 4.6 46.743 1 16.59 ? O4D NDP 1169 A 1 HETATM 31 C C3D NDP . . . C 3 22.977 6.552 46.473 1 17.25 ? C3D NDP 1169 A 1 HETATM 32 O O3D NDP . . . C 3 23.929 6.258 45.461 1 19.84 ? O3D NDP 1169 A 1 HETATM 33 C C2D NDP . . . C 3 21.609 6.771 45.825 1 17.51 ? C2D NDP 1169 A 1 HETATM 34 O O2D NDP . . . C 3 21.674 7.519 44.656 1 20.78 ? O2D NDP 1169 A 1 HETATM 35 C C1D NDP . . . C 3 21.226 5.319 45.625 1 14.95 ? C1D NDP 1169 A 1 HETATM 36 N N1N NDP . . . C 3 19.773 5.136 45.488 1 13.87 ? N1N NDP 1169 A 1 HETATM 37 C C2N NDP . . . C 3 19.338 4.383 44.456 1 12.65 ? C2N NDP 1169 A 1 HETATM 38 C C3N NDP . . . C 3 18.003 4.122 44.298 1 11.84 ? C3N NDP 1169 A 1 HETATM 39 C C7N NDP . . . C 3 17.599 3.242 43.195 1 13.41 ? C7N NDP 1169 A 1 HETATM 40 O O7N NDP . . . C 3 16.362 2.712 43.266 1 12.86 ? O7N NDP 1169 A 1 HETATM 41 N N7N NDP . . . C 3 18.419 2.987 42.194 1 12.04 ? N7N NDP 1169 A 1 HETATM 42 C C4N NDP . . . C 3 16.988 4.405 45.359 1 11.38 ? C4N NDP 1169 A 1 HETATM 43 C C5N NDP . . . C 3 17.573 5.201 46.44 1 14.17 ? C5N NDP 1169 A 1 HETATM 44 C C6N NDP . . . C 3 18.911 5.513 46.482 1 12.87 ? C6N NDP 1169 A 1 HETATM 45 P P2B NDP . . . C 3 23.633 8.496 59.496 1 15.86 ? P2B NDP 1169 A 1 HETATM 46 O O1X NDP . . . C 3 24.956 8.303 58.809 1 18.18 ? O1X NDP 1169 A 1 HETATM 47 O O2X NDP . . . C 3 23.068 9.865 59.395 1 15.21 ? O2X NDP 1169 A 1 HETATM 48 O O3X NDP . . . C 3 23.623 7.901 60.874 1 16.95 ? O3X NDP 1169 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 48 #