data_2W4X # _model_server_result.job_id VpIMxBZyQ7Y7A2YZ10JN9g _model_server_result.datetime_utc '2024-11-24 15:04:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2w4x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1591}' # _entry.id 2W4X # _exptl.entry_id 2W4X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 265.221 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Streptozotocin _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.3 _cell.angle_gamma 90 _cell.entry_id 2W4X _cell.length_a 186.99 _cell.length_b 52.344 _cell.length_c 84.267 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2W4X _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 32 A GLU 32 1_555 D CA CA . A CA 1592 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc2 A OE1 GLU 61 A GLU 61 1_555 D CA CA . A CA 1592 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc3 A OD1 ASP 64 A ASP 64 1_555 D CA CA . A CA 1592 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.884 ? metalc ? metalc4 A OD2 ASP 64 A ASP 64 1_555 D CA CA . A CA 1592 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.117 ? # _chem_comp.formula 'C8 H15 N3 O7' _chem_comp.formula_weight 265.221 _chem_comp.id STZ _chem_comp.mon_nstd_flag n _chem_comp.name Streptozotocin _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms 2-deoxy-2-{[methyl(nitroso)carbamoyl]amino}-beta-D-glucopyranose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C3 STZ sing 303 n n C3 C4 STZ sing 304 n n C3 C2 STZ sing 305 n n C4 O4 STZ sing 306 n n C4 C5 STZ sing 307 n n C5 C6 STZ sing 308 n n C5 O5 STZ sing 309 n n C6 O6 STZ sing 310 n n O5 C1 STZ sing 311 n n C1 O1 STZ sing 312 n n C1 C2 STZ sing 313 n n C2 N2 STZ sing 314 n n N2 CAM STZ sing 315 n n CAM OAG STZ doub 316 n n CAM NAN STZ sing 317 n n NAN CAH STZ sing 318 n n NAN NAO STZ sing 319 n n NAO OAP STZ doub 320 n n O3 HO3 STZ sing 321 n n C3 H3 STZ sing 322 n n C4 H4 STZ sing 323 n n C2 H2 STZ sing 324 n n O4 HO4 STZ sing 325 n n C5 H5 STZ sing 326 n n C6 H61 STZ sing 327 n n C6 H62 STZ sing 328 n n O6 HO6 STZ sing 329 n n C1 H1 STZ sing 330 n n O1 HO1 STZ sing 331 n n N2 HN21 STZ sing 332 n n CAH HAH1 STZ sing 333 n n CAH HAH2 STZ sing 334 n n CAH HAH3 STZ sing 335 n n # _atom_sites.entry_id 2W4X _atom_sites.fract_transf_matrix[1][1] 0.005348 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000876 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019104 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012025 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 1590 1590 GOL GOL . C 3 STZ A 1 1591 1591 STZ STZ . D 4 CA A 1 1592 1592 CA CA . E 5 HOH A 1 2001 2001 HOH HOH . E 5 HOH A 2 2002 2002 HOH HOH . E 5 HOH A 3 2003 2003 HOH HOH . E 5 HOH A 4 2004 2004 HOH HOH . E 5 HOH A 5 2005 2005 HOH HOH . E 5 HOH A 6 2006 2006 HOH HOH . E 5 HOH A 7 2007 2007 HOH HOH . E 5 HOH A 8 2008 2008 HOH HOH . E 5 HOH A 9 2009 2009 HOH HOH . E 5 HOH A 10 2010 2010 HOH HOH . E 5 HOH A 11 2011 2011 HOH HOH . E 5 HOH A 12 2012 2012 HOH HOH . E 5 HOH A 13 2013 2013 HOH HOH . E 5 HOH A 14 2014 2014 HOH HOH . E 5 HOH A 15 2015 2015 HOH HOH . E 5 HOH A 16 2016 2016 HOH HOH . E 5 HOH A 17 2017 2017 HOH HOH . E 5 HOH A 18 2018 2018 HOH HOH . E 5 HOH A 19 2019 2019 HOH HOH . E 5 HOH A 20 2020 2020 HOH HOH . E 5 HOH A 21 2021 2021 HOH HOH . E 5 HOH A 22 2022 2022 HOH HOH . E 5 HOH A 23 2023 2023 HOH HOH . E 5 HOH A 24 2024 2024 HOH HOH . E 5 HOH A 25 2025 2025 HOH HOH . E 5 HOH A 26 2026 2026 HOH HOH . E 5 HOH A 27 2027 2027 HOH HOH . E 5 HOH A 28 2028 2028 HOH HOH . E 5 HOH A 29 2029 2029 HOH HOH . E 5 HOH A 30 2030 2030 HOH HOH . E 5 HOH A 31 2031 2031 HOH HOH . E 5 HOH A 32 2032 2032 HOH HOH . E 5 HOH A 33 2033 2033 HOH HOH . E 5 HOH A 34 2034 2034 HOH HOH . E 5 HOH A 35 2035 2035 HOH HOH . E 5 HOH A 36 2036 2036 HOH HOH . E 5 HOH A 37 2037 2037 HOH HOH . E 5 HOH A 38 2038 2038 HOH HOH . E 5 HOH A 39 2039 2039 HOH HOH . E 5 HOH A 40 2040 2040 HOH HOH . E 5 HOH A 41 2041 2041 HOH HOH . E 5 HOH A 42 2042 2042 HOH HOH . E 5 HOH A 43 2043 2043 HOH HOH . E 5 HOH A 44 2044 2044 HOH HOH . E 5 HOH A 45 2045 2045 HOH HOH . E 5 HOH A 46 2046 2046 HOH HOH . E 5 HOH A 47 2047 2047 HOH HOH . E 5 HOH A 48 2048 2048 HOH HOH . E 5 HOH A 49 2049 2049 HOH HOH . E 5 HOH A 50 2050 2050 HOH HOH . E 5 HOH A 51 2051 2051 HOH HOH . E 5 HOH A 52 2052 2052 HOH HOH . E 5 HOH A 53 2053 2053 HOH HOH . E 5 HOH A 54 2054 2054 HOH HOH . E 5 HOH A 55 2055 2055 HOH HOH . E 5 HOH A 56 2056 2056 HOH HOH . E 5 HOH A 57 2057 2057 HOH HOH . E 5 HOH A 58 2058 2058 HOH HOH . E 5 HOH A 59 2059 2059 HOH HOH . E 5 HOH A 60 2060 2060 HOH HOH . E 5 HOH A 61 2061 2061 HOH HOH . E 5 HOH A 62 2062 2062 HOH HOH . E 5 HOH A 63 2063 2063 HOH HOH . E 5 HOH A 64 2064 2064 HOH HOH . E 5 HOH A 65 2065 2065 HOH HOH . E 5 HOH A 66 2066 2066 HOH HOH . E 5 HOH A 67 2067 2067 HOH HOH . E 5 HOH A 68 2068 2068 HOH HOH . E 5 HOH A 69 2069 2069 HOH HOH . E 5 HOH A 70 2070 2070 HOH HOH . E 5 HOH A 71 2071 2071 HOH HOH . E 5 HOH A 72 2072 2072 HOH HOH . E 5 HOH A 73 2073 2073 HOH HOH . E 5 HOH A 74 2074 2074 HOH HOH . E 5 HOH A 75 2075 2075 HOH HOH . E 5 HOH A 76 2076 2076 HOH HOH . E 5 HOH A 77 2077 2077 HOH HOH . E 5 HOH A 78 2078 2078 HOH HOH . E 5 HOH A 79 2079 2079 HOH HOH . E 5 HOH A 80 2080 2080 HOH HOH . E 5 HOH A 81 2081 2081 HOH HOH . E 5 HOH A 82 2082 2082 HOH HOH . E 5 HOH A 83 2083 2083 HOH HOH . E 5 HOH A 84 2084 2084 HOH HOH . E 5 HOH A 85 2085 2085 HOH HOH . E 5 HOH A 86 2086 2086 HOH HOH . E 5 HOH A 87 2087 2087 HOH HOH . E 5 HOH A 88 2088 2088 HOH HOH . E 5 HOH A 89 2089 2089 HOH HOH . E 5 HOH A 90 2090 2090 HOH HOH . E 5 HOH A 91 2091 2091 HOH HOH . E 5 HOH A 92 2092 2092 HOH HOH . E 5 HOH A 93 2093 2093 HOH HOH . E 5 HOH A 94 2094 2094 HOH HOH . E 5 HOH A 95 2095 2095 HOH HOH . E 5 HOH A 96 2096 2096 HOH HOH . E 5 HOH A 97 2097 2097 HOH HOH . E 5 HOH A 98 2098 2098 HOH HOH . E 5 HOH A 99 2099 2099 HOH HOH . E 5 HOH A 100 2100 2100 HOH HOH . E 5 HOH A 101 2101 2101 HOH HOH . E 5 HOH A 102 2102 2102 HOH HOH . E 5 HOH A 103 2103 2103 HOH HOH . E 5 HOH A 104 2104 2104 HOH HOH . E 5 HOH A 105 2105 2105 HOH HOH . E 5 HOH A 106 2106 2106 HOH HOH . E 5 HOH A 107 2107 2107 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 STZ . . . C 3 -9.268 -12.181 11.221 1 27.5 ? O3 STZ 1591 A 1 HETATM 2 C C3 STZ . . . C 3 -8.748 -11.016 10.586 1 23.84 ? C3 STZ 1591 A 1 HETATM 3 C C4 STZ . . . C 3 -7.961 -10.178 11.581 1 23.5 ? C4 STZ 1591 A 1 HETATM 4 O O4 STZ . . . C 3 -8.868 -9.669 12.584 1 22.24 ? O4 STZ 1591 A 1 HETATM 5 C C5 STZ . . . C 3 -7.212 -9.084 10.825 1 23.28 ? C5 STZ 1591 A 1 HETATM 6 C C6 STZ . . . C 3 -6.448 -8.16 11.763 1 24.51 ? C6 STZ 1591 A 1 HETATM 7 O O6 STZ . . . C 3 -5.758 -8.927 12.753 1 25.81 ? O6 STZ 1591 A 1 HETATM 8 O O5 STZ . . . C 3 -6.315 -9.668 9.857 1 22.21 ? O5 STZ 1591 A 1 HETATM 9 C C1 STZ . . . C 3 -7.048 -10.363 8.864 1 22.77 ? C1 STZ 1591 A 1 HETATM 10 O O1 STZ . . . C 3 -6.134 -10.962 7.973 1 23.83 ? O1 STZ 1591 A 1 HETATM 11 C C2 STZ . . . C 3 -7.842 -11.502 9.48 1 22.95 ? C2 STZ 1591 A 1 HETATM 12 N N2 STZ . . . C 3 -8.635 -12.117 8.438 1 21.56 ? N2 STZ 1591 A 1 HETATM 13 C CAM STZ . . . C 3 -9.468 -11.454 7.651 1 22.35 ? CAM STZ 1591 A 1 HETATM 14 O OAG STZ . . . C 3 -9.655 -10.259 7.729 1 23.85 ? OAG STZ 1591 A 1 HETATM 15 N NAN STZ . . . C 3 -10.125 -12.161 6.747 1 25.14 ? NAN STZ 1591 A 1 HETATM 16 C CAH STZ . . . C 3 -11.095 -11.652 5.797 1 22.72 ? CAH STZ 1591 A 1 HETATM 17 N NAO STZ . . . C 3 -9.871 -13.541 6.717 1 27.08 ? NAO STZ 1591 A 1 HETATM 18 O OAP STZ . . . C 3 -10.51 -14.203 5.925 1 30.34 ? OAP STZ 1591 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 18 #