data_2W69 # _model_server_result.job_id gAuZBMx11QKnV7AO9Fj22w _model_server_result.datetime_utc '2024-11-24 22:49:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2w69 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 2W69 # _exptl.entry_id 2W69 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2W69 _cell.length_a 67.13 _cell.length_b 67.13 _cell.length_c 302.95 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2W69 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,Q 1 1 B,H,I,J,K,R 2 1 C,L,M,N,O,P,S 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 H N N ? 2 L N N ? 2 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 87 A GLU 80 1_555 D MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc2 A OD1 ASP 115 A ASP 108 1_555 D MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc3 A OD2 ASP 115 A ASP 108 1_555 E MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc4 A OE2 GLU 126 A GLU 119 1_555 E MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc5 A O ILE 127 A ILE 120 1_555 E MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc6 D MN MN . A MN 301 1_555 Q O HOH . A HOH 2064 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc7 D MN MN . A MN 301 1_555 Q O HOH . A HOH 2065 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc8 D MN MN . A MN 301 1_555 C OE2 GLU 66 D GLU 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc9 E MN MN . A MN 302 1_555 C OE1 GLU 66 D GLU 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc10 E MN MN . A MN 302 1_555 C OE2 GLU 66 D GLU 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.786 ? metalc ? metalc11 B OE2 GLU 66 B GLU 59 1_455 M MN MN . D MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc12 B OD1 ASP 115 B ASP 108 1_555 H MN MN . B MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc13 C NE2 HIS 48 D HIS 41 1_555 M MN MN . D MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc14 C OD1 ASP 115 D ASP 108 1_555 L MN MN . D MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc15 C OD2 ASP 115 D ASP 108 1_555 M MN MN . D MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc16 C O ILE 127 D ILE 120 1_555 M MN MN . D MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc17 L MN MN . D MN 301 1_555 S O HOH . D HOH 2013 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2W69 _atom_sites.fract_transf_matrix[1][1] 0.014896 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014896 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003301 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 MN A 1 301 301 MN MN . E 2 MN A 1 302 302 MN MN . F 3 SO4 A 1 401 401 SO4 SO4 . G 3 SO4 A 1 402 402 SO4 SO4 . H 2 MN B 1 301 301 MN MN . I 3 SO4 B 1 401 401 SO4 SO4 . J 3 SO4 B 1 402 402 SO4 SO4 . K 3 SO4 B 1 403 403 SO4 SO4 . L 2 MN D 1 301 301 MN MN . M 2 MN D 1 302 302 MN MN . N 3 SO4 D 1 401 401 SO4 SO4 . O 3 SO4 D 1 402 402 SO4 SO4 . P 3 SO4 D 1 403 403 SO4 SO4 . Q 4 HOH A 1 2001 2001 HOH HOH . Q 4 HOH A 2 2002 2002 HOH HOH . Q 4 HOH A 3 2003 2003 HOH HOH . Q 4 HOH A 4 2004 2004 HOH HOH . Q 4 HOH A 5 2005 2005 HOH HOH . Q 4 HOH A 6 2006 2006 HOH HOH . Q 4 HOH A 7 2007 2007 HOH HOH . Q 4 HOH A 8 2008 2008 HOH HOH . Q 4 HOH A 9 2009 2009 HOH HOH . Q 4 HOH A 10 2010 2010 HOH HOH . Q 4 HOH A 11 2011 2011 HOH HOH . Q 4 HOH A 12 2012 2012 HOH HOH . Q 4 HOH A 13 2013 2013 HOH HOH . Q 4 HOH A 14 2014 2014 HOH HOH . Q 4 HOH A 15 2015 2015 HOH HOH . Q 4 HOH A 16 2016 2016 HOH HOH . Q 4 HOH A 17 2017 2017 HOH HOH . Q 4 HOH A 18 2018 2018 HOH HOH . Q 4 HOH A 19 2019 2019 HOH HOH . Q 4 HOH A 20 2020 2020 HOH HOH . Q 4 HOH A 21 2021 2021 HOH HOH . Q 4 HOH A 22 2022 2022 HOH HOH . Q 4 HOH A 23 2023 2023 HOH HOH . Q 4 HOH A 24 2024 2024 HOH HOH . Q 4 HOH A 25 2025 2025 HOH HOH . Q 4 HOH A 26 2026 2026 HOH HOH . Q 4 HOH A 27 2027 2027 HOH HOH . Q 4 HOH A 28 2028 2028 HOH HOH . Q 4 HOH A 29 2029 2029 HOH HOH . Q 4 HOH A 30 2030 2030 HOH HOH . Q 4 HOH A 31 2031 2031 HOH HOH . Q 4 HOH A 32 2032 2032 HOH HOH . Q 4 HOH A 33 2033 2033 HOH HOH . Q 4 HOH A 34 2034 2034 HOH HOH . Q 4 HOH A 35 2035 2035 HOH HOH . Q 4 HOH A 36 2036 2036 HOH HOH . Q 4 HOH A 37 2037 2037 HOH HOH . Q 4 HOH A 38 2038 2038 HOH HOH . Q 4 HOH A 39 2039 2039 HOH HOH . Q 4 HOH A 40 2040 2040 HOH HOH . Q 4 HOH A 41 2041 2041 HOH HOH . Q 4 HOH A 42 2042 2042 HOH HOH . Q 4 HOH A 43 2043 2043 HOH HOH . Q 4 HOH A 44 2044 2044 HOH HOH . Q 4 HOH A 45 2045 2045 HOH HOH . Q 4 HOH A 46 2046 2046 HOH HOH . Q 4 HOH A 47 2047 2047 HOH HOH . Q 4 HOH A 48 2048 2048 HOH HOH . Q 4 HOH A 49 2049 2049 HOH HOH . Q 4 HOH A 50 2050 2050 HOH HOH . Q 4 HOH A 51 2051 2051 HOH HOH . Q 4 HOH A 52 2052 2052 HOH HOH . Q 4 HOH A 53 2053 2053 HOH HOH . Q 4 HOH A 54 2054 2054 HOH HOH . Q 4 HOH A 55 2055 2055 HOH HOH . Q 4 HOH A 56 2056 2056 HOH HOH . Q 4 HOH A 57 2057 2057 HOH HOH . Q 4 HOH A 58 2058 2058 HOH HOH . Q 4 HOH A 59 2059 2059 HOH HOH . Q 4 HOH A 60 2060 2060 HOH HOH . Q 4 HOH A 61 2061 2061 HOH HOH . Q 4 HOH A 62 2062 2062 HOH HOH . Q 4 HOH A 63 2063 2063 HOH HOH . Q 4 HOH A 64 2064 2064 HOH HOH . Q 4 HOH A 65 2065 2065 HOH HOH . R 4 HOH B 1 2001 2001 HOH HOH . R 4 HOH B 2 2002 2002 HOH HOH . R 4 HOH B 3 2003 2003 HOH HOH . R 4 HOH B 4 2004 2004 HOH HOH . R 4 HOH B 5 2005 2005 HOH HOH . R 4 HOH B 6 2006 2006 HOH HOH . R 4 HOH B 7 2007 2007 HOH HOH . R 4 HOH B 8 2008 2008 HOH HOH . R 4 HOH B 9 2009 2009 HOH HOH . R 4 HOH B 10 2010 2010 HOH HOH . R 4 HOH B 11 2011 2011 HOH HOH . R 4 HOH B 12 2012 2012 HOH HOH . R 4 HOH B 13 2013 2013 HOH HOH . R 4 HOH B 14 2014 2014 HOH HOH . R 4 HOH B 15 2015 2015 HOH HOH . R 4 HOH B 16 2016 2016 HOH HOH . R 4 HOH B 17 2017 2017 HOH HOH . R 4 HOH B 18 2018 2018 HOH HOH . R 4 HOH B 19 2019 2019 HOH HOH . R 4 HOH B 20 2020 2020 HOH HOH . R 4 HOH B 21 2021 2021 HOH HOH . R 4 HOH B 22 2022 2022 HOH HOH . R 4 HOH B 23 2023 2023 HOH HOH . R 4 HOH B 24 2024 2024 HOH HOH . R 4 HOH B 25 2025 2025 HOH HOH . R 4 HOH B 26 2026 2026 HOH HOH . R 4 HOH B 27 2027 2027 HOH HOH . R 4 HOH B 28 2028 2028 HOH HOH . R 4 HOH B 29 2029 2029 HOH HOH . R 4 HOH B 30 2030 2030 HOH HOH . R 4 HOH B 31 2031 2031 HOH HOH . R 4 HOH B 32 2032 2032 HOH HOH . R 4 HOH B 33 2033 2033 HOH HOH . R 4 HOH B 34 2034 2034 HOH HOH . R 4 HOH B 35 2035 2035 HOH HOH . R 4 HOH B 36 2036 2036 HOH HOH . R 4 HOH B 37 2037 2037 HOH HOH . R 4 HOH B 38 2038 2038 HOH HOH . R 4 HOH B 39 2039 2039 HOH HOH . R 4 HOH B 40 2040 2040 HOH HOH . R 4 HOH B 41 2041 2041 HOH HOH . R 4 HOH B 42 2042 2042 HOH HOH . R 4 HOH B 43 2043 2043 HOH HOH . R 4 HOH B 44 2044 2044 HOH HOH . R 4 HOH B 45 2045 2045 HOH HOH . R 4 HOH B 46 2046 2046 HOH HOH . R 4 HOH B 47 2047 2047 HOH HOH . R 4 HOH B 48 2048 2048 HOH HOH . R 4 HOH B 49 2049 2049 HOH HOH . R 4 HOH B 50 2050 2050 HOH HOH . R 4 HOH B 51 2051 2051 HOH HOH . R 4 HOH B 52 2052 2052 HOH HOH . R 4 HOH B 53 2053 2053 HOH HOH . R 4 HOH B 54 2054 2054 HOH HOH . R 4 HOH B 55 2055 2055 HOH HOH . R 4 HOH B 56 2056 2056 HOH HOH . R 4 HOH B 57 2057 2057 HOH HOH . R 4 HOH B 58 2058 2058 HOH HOH . R 4 HOH B 59 2059 2059 HOH HOH . R 4 HOH B 60 2060 2060 HOH HOH . R 4 HOH B 61 2061 2061 HOH HOH . R 4 HOH B 62 2062 2062 HOH HOH . R 4 HOH B 63 2063 2063 HOH HOH . R 4 HOH B 64 2064 2064 HOH HOH . R 4 HOH B 65 2065 2065 HOH HOH . R 4 HOH B 66 2066 2066 HOH HOH . R 4 HOH B 67 2067 2067 HOH HOH . R 4 HOH B 68 2068 2068 HOH HOH . R 4 HOH B 69 2069 2069 HOH HOH . R 4 HOH B 70 2070 2070 HOH HOH . R 4 HOH B 71 2071 2071 HOH HOH . R 4 HOH B 72 2072 2072 HOH HOH . S 4 HOH D 1 2001 2001 HOH HOH . S 4 HOH D 2 2002 2002 HOH HOH . S 4 HOH D 3 2003 2003 HOH HOH . S 4 HOH D 4 2004 2004 HOH HOH . S 4 HOH D 5 2005 2005 HOH HOH . S 4 HOH D 6 2006 2006 HOH HOH . S 4 HOH D 7 2007 2007 HOH HOH . S 4 HOH D 8 2008 2008 HOH HOH . S 4 HOH D 9 2009 2009 HOH HOH . S 4 HOH D 10 2010 2010 HOH HOH . S 4 HOH D 11 2011 2011 HOH HOH . S 4 HOH D 12 2012 2012 HOH HOH . S 4 HOH D 13 2013 2013 HOH HOH . S 4 HOH D 14 2014 2014 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -5.664 _atom_site.Cartn_y 32.633 _atom_site.Cartn_z 87.064 _atom_site.occupancy 0.8 _atom_site.B_iso_or_equiv 34.83 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 212 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #