data_2W6U # _model_server_result.job_id NdiaH435bHJ_WRJl6K56cA _model_server_result.datetime_utc '2024-11-22 06:45:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2w6u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1819}' # _entry.id 2W6U # _exptl.entry_id 2W6U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 130.36 _cell.angle_gamma 90 _cell.entry_id 2W6U _cell.length_a 194.774 _cell.length_b 129.928 _cell.length_c 141.565 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2W6U _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PQS dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,J,K 1 1 B,C,L,M,N,O,P,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 P C15 PVE . C PVE 1 1_555 C N DSN 1 C DSN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.277 ? covale ? covale2 C C DSN 1 C DSN 3 1_555 C N ALA 2 C ALA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 C C ALA 2 C ALA 4 1_555 C N AHO 3 C AHO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale4 C C AHO 3 C AHO 5 1_555 C N ORN 4 C ORN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale5 C C ORN 4 C ORN 6 1_555 C N DAS 5 C DAS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 C NE ORN 4 C ORN 6 1_555 C C SER 7 C SER 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.291 ? covale ? covale7 C C DAS 5 C DAS 7 1_555 C N AHO 6 C AHO 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale8 C C AHO 6 C AHO 8 1_555 C N SER 7 C SER 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? metalc ? metalc1 P O26 PVE . C PVE 1 1_555 Q FE FE . C FE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc2 P O25 PVE . C PVE 1 1_555 Q FE FE . C FE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc3 Q FE FE . C FE 2 1_555 C C6 AHO 3 C AHO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? metalc ? metalc4 Q FE FE . C FE 2 1_555 C O3 AHO 3 C AHO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc5 Q FE FE . C FE 2 1_555 C O2 AHO 3 C AHO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc6 Q FE FE . C FE 2 1_555 C N2 AHO 3 C AHO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc7 Q FE FE . C FE 2 1_555 C O3 AHO 6 C AHO 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc8 Q FE FE . C FE 2 1_555 C O2 AHO 6 C AHO 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 380 n n P O2 PO4 sing 381 n n P O3 PO4 sing 382 n n P O4 PO4 sing 383 n n # _atom_sites.entry_id 2W6U _atom_sites.fract_transf_matrix[1][1] 0.005134 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004363 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007697 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00927 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 N8E A 1 1816 1816 N8E N8E . E 3 N8E A 1 1817 1817 N8E N8E . F 4 PO4 A 1 1818 1818 PO4 PO4 . G 4 PO4 A 1 1819 1819 PO4 PO4 . H 4 PO4 A 1 1820 1820 PO4 PO4 . I 4 PO4 A 1 1821 1821 PO4 PO4 . J 4 PO4 A 1 1822 1822 PO4 PO4 . K 4 PO4 A 1 1823 1823 PO4 PO4 . L 4 PO4 B 1 1818 1818 PO4 PO4 . M 4 PO4 B 1 1819 1819 PO4 PO4 . N 4 PO4 B 1 1820 1820 PO4 PO4 . O 4 PO4 B 1 1821 1821 PO4 PO4 . P 5 PVE C 1 1 1 PVE PVE . Q 6 FE C 1 2 2 FE FE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . G 4 -13.28 1.585 26.074 1 33.34 ? P PO4 1819 A 1 HETATM 2 O O1 PO4 . . . G 4 -14.347 0.738 26.795 1 34.43 ? O1 PO4 1819 A 1 HETATM 3 O O2 PO4 . . . G 4 -11.923 0.877 26.115 1 29.23 ? O2 PO4 1819 A 1 HETATM 4 O O3 PO4 . . . G 4 -13.132 2.888 26.849 1 33.38 ? O3 PO4 1819 A 1 HETATM 5 O O4 PO4 . . . G 4 -13.834 1.903 24.671 1 28.75 ? O4 PO4 1819 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #