data_2WCM
#
_model_server_result.job_id            DFKqplSVYdCNJ45fAH6loA 
_model_server_result.datetime_utc      '2025-01-11 18:58:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2wcm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1143}' 
#
_entry.id    2WCM 
#
_exptl.entry_id    2WCM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              236.393 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (10E)-hexadec-10-en-12-yn-1-ol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2WCM 
_cell.length_a            33.209 
_cell.length_b            33.209 
_cell.length_c            189.363 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2WCM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 19 A CYS 19 1_555 A SG CYS 54 A CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf2 A SG CYS 50 A CYS 50 1_555 A SG CYS 108 A CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? 
disulf ? disulf3 A SG CYS 97 A CYS 97 1_555 A SG CYS 117 A CYS 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
metalc ? metalc1 B MG MG . A MG 1142 1_555 E O HOH . A HOH 2056 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
metalc ? metalc2 B MG MG . A MG 1142 1_555 E O HOH . A HOH 2057 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? 
metalc ? metalc3 B MG MG . A MG 1142 1_555 E O HOH . A HOH 2058 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? 
metalc ? metalc4 B MG MG . A MG 1142 1_555 E O HOH . A HOH 2091 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? 
metalc ? metalc5 B MG MG . A MG 1142 1_555 E O HOH . A HOH 2094 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? 
metalc ? metalc6 B MG MG . A MG 1142 1_555 E O HOH . A HOH 2106 1_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
metalc ? metalc7 D MG MG . A MG 1144 1_555 E O HOH . A HOH 2015 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? 
metalc ? metalc8 D MG MG . A MG 1144 1_555 E O HOH . A HOH 2045 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.859 ? 
metalc ? metalc9 D MG MG . A MG 1144 1_555 E O HOH . A HOH 2112 4_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc10 D MG MG . A MG 1144 1_555 E O HOH . A HOH 2114 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? 
metalc ? metalc11 D MG MG . A MG 1144 1_555 E O HOH . A HOH 2115 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? 
#
_chem_comp.formula           'C16 H28 O' 
_chem_comp.formula_weight    236.393 
_chem_comp.id                B9M 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (10E)-hexadec-10-en-12-yn-1-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C16 C15 B9M sing 70 n n 
C15 C14 B9M sing 71 n n 
C14 C13 B9M sing 72 n n 
C13 C12 B9M trip 73 n n 
C12 C11 B9M sing 74 n n 
C11 C10 B9M doub 75 n n 
C10 C9 B9M sing 76 n n 
C9 C8 B9M sing 77 n n 
C8 C7 B9M sing 78 n n 
C7 C6 B9M sing 79 n n 
C6 C5 B9M sing 80 n n 
C5 C4 B9M sing 81 n n 
C4 C3 B9M sing 82 e n 
C3 C2 B9M sing 83 n n 
C2 C1 B9M sing 84 n n 
C1 O B9M sing 85 n n 
C16 H161 B9M sing 86 n n 
C16 H162 B9M sing 87 n n 
C16 H163 B9M sing 88 n n 
C15 H151 B9M sing 89 n n 
C15 H152 B9M sing 90 n n 
C14 H141 B9M sing 91 n n 
C14 H142 B9M sing 92 n n 
C11 H11 B9M sing 93 n n 
C10 H10 B9M sing 94 n n 
C9 H91C B9M sing 95 n n 
C9 H92C B9M sing 96 n n 
C8 H81C B9M sing 97 n n 
C8 H82C B9M sing 98 n n 
C7 H71C B9M sing 99 n n 
C7 H72C B9M sing 100 n n 
C6 H61C B9M sing 101 n n 
C6 H62C B9M sing 102 n n 
C5 H51C B9M sing 103 n n 
C5 H52C B9M sing 104 n n 
C4 H41C B9M sing 105 n n 
C4 H42C B9M sing 106 n n 
C3 H31C B9M sing 107 n n 
C3 H32C B9M sing 108 n n 
C2 H21C B9M sing 109 n n 
C2 H22C B9M sing 110 n n 
C1 H11C B9M sing 111 n n 
C1 H12C B9M sing 112 n n 
O H B9M sing 113 n n 
#
_atom_sites.entry_id                     2WCM 
_atom_sites.fract_transf_matrix[1][1]    0.030112 
_atom_sites.fract_transf_matrix[1][2]    0.017385 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.034771 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005281 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 1142 1142 MG MG . 
C 3 B9M A 1 1143 1143 B9M B9M . 
D 2 MG A 1 1144 1144 MG MG . 
E 4 HOH A 1 2001 2001 HOH HOH . 
E 4 HOH A 2 2002 2002 HOH HOH . 
E 4 HOH A 3 2003 2003 HOH HOH . 
E 4 HOH A 4 2004 2004 HOH HOH . 
E 4 HOH A 5 2005 2005 HOH HOH . 
E 4 HOH A 6 2006 2006 HOH HOH . 
E 4 HOH A 7 2007 2007 HOH HOH . 
E 4 HOH A 8 2008 2008 HOH HOH . 
E 4 HOH A 9 2009 2009 HOH HOH . 
E 4 HOH A 10 2010 2010 HOH HOH . 
E 4 HOH A 11 2011 2011 HOH HOH . 
E 4 HOH A 12 2012 2012 HOH HOH . 
E 4 HOH A 13 2013 2013 HOH HOH . 
E 4 HOH A 14 2014 2014 HOH HOH . 
E 4 HOH A 15 2015 2015 HOH HOH . 
E 4 HOH A 16 2016 2016 HOH HOH . 
E 4 HOH A 17 2017 2017 HOH HOH . 
E 4 HOH A 18 2018 2018 HOH HOH . 
E 4 HOH A 19 2019 2019 HOH HOH . 
E 4 HOH A 20 2020 2020 HOH HOH . 
E 4 HOH A 21 2021 2021 HOH HOH . 
E 4 HOH A 22 2022 2022 HOH HOH . 
E 4 HOH A 23 2023 2023 HOH HOH . 
E 4 HOH A 24 2024 2024 HOH HOH . 
E 4 HOH A 25 2025 2025 HOH HOH . 
E 4 HOH A 26 2026 2026 HOH HOH . 
E 4 HOH A 27 2027 2027 HOH HOH . 
E 4 HOH A 28 2028 2028 HOH HOH . 
E 4 HOH A 29 2029 2029 HOH HOH . 
E 4 HOH A 30 2030 2030 HOH HOH . 
E 4 HOH A 31 2031 2031 HOH HOH . 
E 4 HOH A 32 2032 2032 HOH HOH . 
E 4 HOH A 33 2033 2033 HOH HOH . 
E 4 HOH A 34 2034 2034 HOH HOH . 
E 4 HOH A 35 2035 2035 HOH HOH . 
E 4 HOH A 36 2036 2036 HOH HOH . 
E 4 HOH A 37 2037 2037 HOH HOH . 
E 4 HOH A 38 2038 2038 HOH HOH . 
E 4 HOH A 39 2039 2039 HOH HOH . 
E 4 HOH A 40 2040 2040 HOH HOH . 
E 4 HOH A 41 2041 2041 HOH HOH . 
E 4 HOH A 42 2042 2042 HOH HOH . 
E 4 HOH A 43 2043 2043 HOH HOH . 
E 4 HOH A 44 2044 2044 HOH HOH . 
E 4 HOH A 45 2045 2045 HOH HOH . 
E 4 HOH A 46 2046 2046 HOH HOH . 
E 4 HOH A 47 2047 2047 HOH HOH . 
E 4 HOH A 48 2048 2048 HOH HOH . 
E 4 HOH A 49 2049 2049 HOH HOH . 
E 4 HOH A 50 2050 2050 HOH HOH . 
E 4 HOH A 51 2051 2051 HOH HOH . 
E 4 HOH A 52 2052 2052 HOH HOH . 
E 4 HOH A 53 2053 2053 HOH HOH . 
E 4 HOH A 54 2054 2054 HOH HOH . 
E 4 HOH A 55 2055 2055 HOH HOH . 
E 4 HOH A 56 2056 2056 HOH HOH . 
E 4 HOH A 57 2057 2057 HOH HOH . 
E 4 HOH A 58 2058 2058 HOH HOH . 
E 4 HOH A 59 2059 2059 HOH HOH . 
E 4 HOH A 60 2060 2060 HOH HOH . 
E 4 HOH A 61 2061 2061 HOH HOH . 
E 4 HOH A 62 2062 2062 HOH HOH . 
E 4 HOH A 63 2063 2063 HOH HOH . 
E 4 HOH A 64 2064 2064 HOH HOH . 
E 4 HOH A 65 2065 2065 HOH HOH . 
E 4 HOH A 66 2066 2066 HOH HOH . 
E 4 HOH A 67 2067 2067 HOH HOH . 
E 4 HOH A 68 2068 2068 HOH HOH . 
E 4 HOH A 69 2069 2069 HOH HOH . 
E 4 HOH A 70 2070 2070 HOH HOH . 
E 4 HOH A 71 2071 2071 HOH HOH . 
E 4 HOH A 72 2072 2072 HOH HOH . 
E 4 HOH A 73 2073 2073 HOH HOH . 
E 4 HOH A 74 2074 2074 HOH HOH . 
E 4 HOH A 75 2075 2075 HOH HOH . 
E 4 HOH A 76 2076 2076 HOH HOH . 
E 4 HOH A 77 2077 2077 HOH HOH . 
E 4 HOH A 78 2078 2078 HOH HOH . 
E 4 HOH A 79 2079 2079 HOH HOH . 
E 4 HOH A 80 2080 2080 HOH HOH . 
E 4 HOH A 81 2081 2081 HOH HOH . 
E 4 HOH A 82 2082 2082 HOH HOH . 
E 4 HOH A 83 2083 2083 HOH HOH . 
E 4 HOH A 84 2084 2084 HOH HOH . 
E 4 HOH A 85 2085 2085 HOH HOH . 
E 4 HOH A 86 2086 2086 HOH HOH . 
E 4 HOH A 87 2087 2087 HOH HOH . 
E 4 HOH A 88 2088 2088 HOH HOH . 
E 4 HOH A 89 2089 2089 HOH HOH . 
E 4 HOH A 90 2090 2090 HOH HOH . 
E 4 HOH A 91 2091 2091 HOH HOH . 
E 4 HOH A 92 2092 2092 HOH HOH . 
E 4 HOH A 93 2093 2093 HOH HOH . 
E 4 HOH A 94 2094 2094 HOH HOH . 
E 4 HOH A 95 2095 2095 HOH HOH . 
E 4 HOH A 96 2096 2096 HOH HOH . 
E 4 HOH A 97 2097 2097 HOH HOH . 
E 4 HOH A 98 2098 2098 HOH HOH . 
E 4 HOH A 99 2099 2099 HOH HOH . 
E 4 HOH A 100 2100 2100 HOH HOH . 
E 4 HOH A 101 2101 2101 HOH HOH . 
E 4 HOH A 102 2102 2102 HOH HOH . 
E 4 HOH A 103 2103 2103 HOH HOH . 
E 4 HOH A 104 2104 2104 HOH HOH . 
E 4 HOH A 105 2105 2105 HOH HOH . 
E 4 HOH A 106 2106 2106 HOH HOH . 
E 4 HOH A 107 2107 2107 HOH HOH . 
E 4 HOH A 108 2108 2108 HOH HOH . 
E 4 HOH A 109 2109 2109 HOH HOH . 
E 4 HOH A 110 2110 2110 HOH HOH . 
E 4 HOH A 111 2111 2111 HOH HOH . 
E 4 HOH A 112 2112 2112 HOH HOH . 
E 4 HOH A 113 2113 2113 HOH HOH . 
E 4 HOH A 114 2114 2114 HOH HOH . 
E 4 HOH A 115 2115 2115 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C16 B9M . . . C 3 7.769 -0.03 20.498 1 38.94 ? C16 B9M 1143 A 1 
HETATM 2 C C15 B9M . . . C 3 7.516 -0.837 19.242 1 40.4 ? C15 B9M 1143 A 1 
HETATM 3 C C14 B9M . . . C 3 6.068 -0.732 18.772 1 41.17 ? C14 B9M 1143 A 1 
HETATM 4 C C13 B9M . . . C 3 5.538 -2.007 18.236 1 41.62 ? C13 B9M 1143 A 1 
HETATM 5 C C12 B9M . . . C 3 5.133 -3.038 17.795 1 39.67 ? C12 B9M 1143 A 1 
HETATM 6 C C11 B9M . . . C 3 4.9 -4.1 17.167 1 36.83 ? C11 B9M 1143 A 1 
HETATM 7 C C10 B9M . . . C 3 4.243 -4.263 16.017 1 34.51 ? C10 B9M 1143 A 1 
HETATM 8 C C9 B9M . . . C 3 4.221 -5.669 15.429 1 30.63 ? C9 B9M 1143 A 1 
HETATM 9 C C8 B9M . . . C 3 5.646 -6.11 15.022 1 28.85 ? C8 B9M 1143 A 1 
HETATM 10 C C7 B9M . . . C 3 6.699 -4.975 15.083 1 27.9 ? C7 B9M 1143 A 1 
HETATM 11 C C6 B9M . . . C 3 7.774 -5.09 16.201 1 26.03 ? C6 B9M 1143 A 1 
HETATM 12 C C5 B9M . . . C 3 8.478 -3.754 16.575 1 24.15 ? C5 B9M 1143 A 1 
HETATM 13 C C4 B9M . . . C 3 9.418 -3.804 17.802 1 25.05 ? C4 B9M 1143 A 1 
HETATM 14 C C3 B9M . . . C 3 10.073 -2.447 18.149 1 23.98 ? C3 B9M 1143 A 1 
HETATM 15 C C2 B9M . . . C 3 10.685 -2.278 19.569 1 20.88 ? C2 B9M 1143 A 1 
HETATM 16 C C1 B9M . . . C 3 11.669 -1.049 19.635 1 23.68 ? C1 B9M 1143 A 1 
HETATM 17 O O B9M . . . C 3 12.029 -0.488 20.959 1 23.12 ? O B9M 1143 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           17 
#