data_2WD1 # _model_server_result.job_id 0i4dT9XYNrJ_7qQQNRl-JQ _model_server_result.datetime_utc '2025-01-05 11:04:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2wd1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2347}' # _entry.id 2WD1 # _exptl.entry_id 2WD1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 346.318 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[(2-NITROPHENYL)SULFONYL]-1H-PYRROLO[3,2-B]PYRIDINE-6-CARBOXAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.01 _cell.angle_gamma 90 _cell.entry_id 2WD1 _cell.length_a 37.411 _cell.length_b 42.312 _cell.length_c 84.826 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2WD1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H10 N4 O5 S' _chem_comp.formula_weight 346.318 _chem_comp.id ZZY _chem_comp.mon_nstd_flag . _chem_comp.name 1-[(2-NITROPHENYL)SULFONYL]-1H-PYRROLO[3,2-B]PYRIDINE-6-CARBOXAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O11 C10 ZZY doub 388 n n C10 N12 ZZY sing 389 n n C10 C5 ZZY sing 390 n n C5 C3 ZZY sing 391 n y C5 C6 ZZY doub 392 n y C3 C1 ZZY doub 393 n y C1 C2 ZZY sing 394 n y C1 N9 ZZY sing 395 n y C6 N4 ZZY sing 396 n y N4 C2 ZZY doub 397 n y C2 C8 ZZY sing 398 n y C8 C7 ZZY doub 399 n y C7 N9 ZZY sing 400 n y N9 S13 ZZY sing 401 n n S13 O16 ZZY doub 402 n n S13 O15 ZZY doub 403 n n S13 C14 ZZY sing 404 n n C14 C21 ZZY sing 405 n y C14 C20 ZZY doub 406 n y C21 N22 ZZY sing 407 n n C21 C19 ZZY doub 408 n y N22 O23 ZZY sing 409 n n N22 O24 ZZY doub 410 n n C20 C18 ZZY sing 411 n y C18 C17 ZZY doub 412 n y C17 C19 ZZY sing 413 n y N12 H121 ZZY sing 414 n n N12 H122 ZZY sing 415 n n C3 H3 ZZY sing 416 n n C6 H6 ZZY sing 417 n n C8 H8 ZZY sing 418 n n C7 H7 ZZY sing 419 n n C20 H20 ZZY sing 420 n n C19 H19 ZZY sing 421 n n C18 H18 ZZY sing 422 n n C17 H17 ZZY sing 423 n n # _atom_sites.entry_id 2WD1 _atom_sites.fract_transf_matrix[1][1] 0.02673 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001406 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023634 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011805 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZZY A 1 2347 2347 ZZY ZZY . C 3 GBL A 1 2348 2348 GBL GBL . D 3 GBL A 1 2349 2349 GBL GBL . E 4 HOH A 1 2001 2001 HOH HOH . E 4 HOH A 2 2002 2002 HOH HOH . E 4 HOH A 3 2003 2003 HOH HOH . E 4 HOH A 4 2004 2004 HOH HOH . E 4 HOH A 5 2005 2005 HOH HOH . E 4 HOH A 6 2006 2006 HOH HOH . E 4 HOH A 7 2007 2007 HOH HOH . E 4 HOH A 8 2008 2008 HOH HOH . E 4 HOH A 9 2009 2009 HOH HOH . E 4 HOH A 10 2010 2010 HOH HOH . E 4 HOH A 11 2011 2011 HOH HOH . E 4 HOH A 12 2012 2012 HOH HOH . E 4 HOH A 13 2013 2013 HOH HOH . E 4 HOH A 14 2014 2014 HOH HOH . E 4 HOH A 15 2015 2015 HOH HOH . E 4 HOH A 16 2016 2016 HOH HOH . E 4 HOH A 17 2017 2017 HOH HOH . E 4 HOH A 18 2018 2018 HOH HOH . E 4 HOH A 19 2019 2019 HOH HOH . E 4 HOH A 20 2020 2020 HOH HOH . E 4 HOH A 21 2021 2021 HOH HOH . E 4 HOH A 22 2022 2022 HOH HOH . E 4 HOH A 23 2023 2023 HOH HOH . E 4 HOH A 24 2024 2024 HOH HOH . E 4 HOH A 25 2025 2025 HOH HOH . E 4 HOH A 26 2026 2026 HOH HOH . E 4 HOH A 27 2027 2027 HOH HOH . E 4 HOH A 28 2028 2028 HOH HOH . E 4 HOH A 29 2029 2029 HOH HOH . E 4 HOH A 30 2030 2030 HOH HOH . E 4 HOH A 31 2031 2031 HOH HOH . E 4 HOH A 32 2032 2032 HOH HOH . E 4 HOH A 33 2033 2033 HOH HOH . E 4 HOH A 34 2034 2034 HOH HOH . E 4 HOH A 35 2035 2035 HOH HOH . E 4 HOH A 36 2036 2036 HOH HOH . E 4 HOH A 37 2037 2037 HOH HOH . E 4 HOH A 38 2038 2038 HOH HOH . E 4 HOH A 39 2039 2039 HOH HOH . E 4 HOH A 40 2040 2040 HOH HOH . E 4 HOH A 41 2041 2041 HOH HOH . E 4 HOH A 42 2042 2042 HOH HOH . E 4 HOH A 43 2043 2043 HOH HOH . E 4 HOH A 44 2044 2044 HOH HOH . E 4 HOH A 45 2045 2045 HOH HOH . E 4 HOH A 46 2046 2046 HOH HOH . E 4 HOH A 47 2047 2047 HOH HOH . E 4 HOH A 48 2048 2048 HOH HOH . E 4 HOH A 49 2049 2049 HOH HOH . E 4 HOH A 50 2050 2050 HOH HOH . E 4 HOH A 51 2051 2051 HOH HOH . E 4 HOH A 52 2052 2052 HOH HOH . E 4 HOH A 53 2053 2053 HOH HOH . E 4 HOH A 54 2054 2054 HOH HOH . E 4 HOH A 55 2055 2055 HOH HOH . E 4 HOH A 56 2056 2056 HOH HOH . E 4 HOH A 57 2057 2057 HOH HOH . E 4 HOH A 58 2058 2058 HOH HOH . E 4 HOH A 59 2059 2059 HOH HOH . E 4 HOH A 60 2060 2060 HOH HOH . E 4 HOH A 61 2061 2061 HOH HOH . E 4 HOH A 62 2062 2062 HOH HOH . E 4 HOH A 63 2063 2063 HOH HOH . E 4 HOH A 64 2064 2064 HOH HOH . E 4 HOH A 65 2065 2065 HOH HOH . E 4 HOH A 66 2066 2066 HOH HOH . E 4 HOH A 67 2067 2067 HOH HOH . E 4 HOH A 68 2068 2068 HOH HOH . E 4 HOH A 69 2069 2069 HOH HOH . E 4 HOH A 70 2070 2070 HOH HOH . E 4 HOH A 71 2071 2071 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O11 ZZY . . . B 2 109.212 22.434 138.444 1 20.42 ? O11 ZZY 2347 A 1 HETATM 2 C C10 ZZY . . . B 2 108.096 22.044 138.535 1 20.42 ? C10 ZZY 2347 A 1 HETATM 3 N N12 ZZY . . . B 2 107.719 20.844 138.074 1 19.95 ? N12 ZZY 2347 A 1 HETATM 4 C C5 ZZY . . . B 2 106.997 22.767 139.142 1 19.57 ? C5 ZZY 2347 A 1 HETATM 5 C C3 ZZY . . . B 2 105.774 22.166 139.163 1 20.85 ? C3 ZZY 2347 A 1 HETATM 6 C C1 ZZY . . . B 2 104.694 22.828 139.714 1 15.6 ? C1 ZZY 2347 A 1 HETATM 7 C C6 ZZY . . . B 2 107.125 24.023 139.68 1 19.59 ? C6 ZZY 2347 A 1 HETATM 8 N N4 ZZY . . . B 2 106.045 24.658 140.219 1 16.37 ? N4 ZZY 2347 A 1 HETATM 9 C C2 ZZY . . . B 2 104.856 24.069 140.235 1 17.18 ? C2 ZZY 2347 A 1 HETATM 10 C C8 ZZY . . . B 2 103.692 24.495 140.725 1 15.89 ? C8 ZZY 2347 A 1 HETATM 11 C C7 ZZY . . . B 2 102.866 23.466 140.438 1 12.42 ? C7 ZZY 2347 A 1 HETATM 12 N N9 ZZY . . . B 2 103.46 22.449 139.841 1 15.04 ? N9 ZZY 2347 A 1 HETATM 13 S S13 ZZY . . . B 2 102.73 21.045 139.398 1 27.61 ? S13 ZZY 2347 A 1 HETATM 14 O O16 ZZY . . . B 2 101.555 21.161 138.957 1 24.58 ? O16 ZZY 2347 A 1 HETATM 15 O O15 ZZY . . . B 2 103.404 20.45 138.442 1 28.02 ? O15 ZZY 2347 A 1 HETATM 16 C C14 ZZY . . . B 2 102.622 19.891 140.715 1 28.74 ? C14 ZZY 2347 A 1 HETATM 17 C C21 ZZY . . . B 2 101.642 19.822 141.771 1 27.8 ? C21 ZZY 2347 A 1 HETATM 18 N N22 ZZY . . . B 2 100.527 20.738 142.006 1 29.24 ? N22 ZZY 2347 A 1 HETATM 19 O O23 ZZY . . . B 2 100.673 21.968 141.858 1 30.13 ? O23 ZZY 2347 A 1 HETATM 20 O O24 ZZY . . . B 2 99.438 20.41 142.333 1 29.78 ? O24 ZZY 2347 A 1 HETATM 21 C C20 ZZY . . . B 2 103.615 18.932 140.727 1 25.05 ? C20 ZZY 2347 A 1 HETATM 22 C C18 ZZY . . . B 2 103.675 17.977 141.712 1 25.33 ? C18 ZZY 2347 A 1 HETATM 23 C C17 ZZY . . . B 2 102.743 17.946 142.713 1 26.12 ? C17 ZZY 2347 A 1 HETATM 24 C C19 ZZY . . . B 2 101.692 18.786 142.698 1 22.17 ? C19 ZZY 2347 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 27 _model_server_stats.element_count 24 #