data_2WGF
#
_model_server_result.job_id            q85WqNDb75jadBJxuu6HSQ 
_model_server_result.datetime_utc      '2024-11-22 22:53:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2wgf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":1418}' 
#
_entry.id    2WGF 
#
_exptl.entry_id    2WGF 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2WGF 
_cell.length_a            151.505 
_cell.length_b            151.505 
_cell.length_c            147.839 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2WGF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        144 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I,J,K,L,M,Y,Z 1 1 
C,D,N,O,P,Q,R,AA,BA 2 1 
E,F,S,T,U,V,CA,DA 3 1 
G,H,W,X,EA,FA 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             Q 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 237 n n 
C1 C2 PEG sing 238 n n 
C1 H11 PEG sing 239 n n 
C1 H12 PEG sing 240 n n 
O1 HO1 PEG sing 241 n n 
C2 O2 PEG sing 242 n n 
C2 H21 PEG sing 243 n n 
C2 H22 PEG sing 244 n n 
O2 C3 PEG sing 245 n n 
C3 C4 PEG sing 246 n n 
C3 H31 PEG sing 247 n n 
C3 H32 PEG sing 248 n n 
C4 O4 PEG sing 249 n n 
C4 H41 PEG sing 250 n n 
C4 H42 PEG sing 251 n n 
O4 HO4 PEG sing 252 n n 
#
_atom_sites.entry_id                     2WGF 
_atom_sites.fract_transf_matrix[1][1]    0.0066 
_atom_sites.fract_transf_matrix[1][2]    0.003811 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007622 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006764 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 NA A 1 1417 1417 NA NA . 
J 3 PG4 A 1 1418 1418 PG4 PG4 . 
K 3 PG4 B 1 1417 1417 PG4 PG4 . 
L 3 PG4 B 1 1418 1418 PG4 PG4 . 
M 2 NA B 1 1419 1419 NA NA . 
N 3 PG4 C 1 1417 1417 PG4 PG4 . 
O 2 NA C 1 1418 1418 NA NA . 
P 3 PG4 D 1 1417 1417 PG4 PG4 . 
Q 4 PEG D 1 1418 1418 PEG PEG . 
R 2 NA D 1 1419 1419 NA NA . 
S 3 PG4 E 1 1417 1417 PG4 PG4 . 
T 2 NA E 1 1418 1418 NA NA . 
U 3 PG4 F 1 1417 1417 PG4 PG4 . 
V 2 NA F 1 1418 1418 NA NA . 
W 2 NA G 1 1417 1417 NA NA . 
X 2 NA H 1 1417 1417 NA NA . 
Y 5 HOH A 1 2001 2001 HOH HOH . 
Y 5 HOH A 2 2002 2002 HOH HOH . 
Y 5 HOH A 3 2003 2003 HOH HOH . 
Y 5 HOH A 4 2004 2004 HOH HOH . 
Z 5 HOH B 1 2001 2001 HOH HOH . 
Z 5 HOH B 2 2002 2002 HOH HOH . 
Z 5 HOH B 3 2003 2003 HOH HOH . 
AA 5 HOH C 1 2001 2001 HOH HOH . 
AA 5 HOH C 2 2002 2002 HOH HOH . 
AA 5 HOH C 3 2003 2003 HOH HOH . 
AA 5 HOH C 4 2004 2004 HOH HOH . 
AA 5 HOH C 5 2005 2005 HOH HOH . 
AA 5 HOH C 6 2006 2006 HOH HOH . 
AA 5 HOH C 7 2007 2007 HOH HOH . 
BA 5 HOH D 1 2001 2001 HOH HOH . 
BA 5 HOH D 2 2002 2002 HOH HOH . 
BA 5 HOH D 3 2003 2003 HOH HOH . 
BA 5 HOH D 4 2004 2004 HOH HOH . 
BA 5 HOH D 5 2005 2005 HOH HOH . 
BA 5 HOH D 6 2006 2006 HOH HOH . 
BA 5 HOH D 7 2007 2007 HOH HOH . 
CA 5 HOH E 1 2001 2001 HOH HOH . 
CA 5 HOH E 2 2002 2002 HOH HOH . 
DA 5 HOH F 1 2001 2001 HOH HOH . 
DA 5 HOH F 2 2002 2002 HOH HOH . 
DA 5 HOH F 3 2003 2003 HOH HOH . 
DA 5 HOH F 4 2004 2004 HOH HOH . 
EA 5 HOH G 1 2001 2001 HOH HOH . 
EA 5 HOH G 2 2002 2002 HOH HOH . 
EA 5 HOH G 3 2003 2003 HOH HOH . 
FA 5 HOH H 1 2001 2001 HOH HOH . 
FA 5 HOH H 2 2002 2002 HOH HOH . 
FA 5 HOH H 3 2003 2003 HOH HOH . 
FA 5 HOH H 4 2004 2004 HOH HOH . 
FA 5 HOH H 5 2005 2005 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . Q 4 60.764 47.389 -40.212 1 50.85 ? C1 PEG 1418 D 1 
HETATM 2 O O1 PEG . . . Q 4 62.04 46.946 -39.704 1 49.88 ? O1 PEG 1418 D 1 
HETATM 3 C C2 PEG . . . Q 4 60.188 46.442 -41.27 1 49.86 ? C2 PEG 1418 D 1 
HETATM 4 O O2 PEG . . . Q 4 58.889 46.892 -41.686 1 55.76 ? O2 PEG 1418 D 1 
HETATM 5 C C3 PEG . . . Q 4 58.4 46.239 -42.864 1 51.41 ? C3 PEG 1418 D 1 
HETATM 6 C C4 PEG . . . Q 4 57.332 47.113 -43.514 1 51.13 ? C4 PEG 1418 D 1 
HETATM 7 O O4 PEG . . . Q 4 57.186 46.792 -44.905 1 51 ? O4 PEG 1418 D 1 
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_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    51 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           7 
#