data_2WIL # _model_server_result.job_id mzJlOazbbi8DzsuqVtOhYg _model_server_result.datetime_utc '2024-11-29 06:55:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2wil # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":613}' # _entry.id 2WIL # _exptl.entry_id 2WIL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2WIL _cell.length_a 150.35 _cell.length_b 150.35 _cell.length_c 139.43 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2WIL _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -150.35 0 0 3 'crystal symmetry operation' 4_445 y-1/2,-x-1/2,z 0 1 0 -1 0 0 0 0 1 -75.175 -75.175 0 4 'crystal symmetry operation' 3_455 -y-1/2,x+1/2,z 0 -1 0 1 0 0 0 0 1 -75.175 75.175 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id M _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 1 FUC NAG C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C NAG 1 C 1 NAG A 1531 NAG 2 n C NAG 2 C 2 NAG A 1532 NAG 2 n C FUC 3 C 3 FUC A 1533 FUC 2 n D NAG 1 D 1 NAG A 1534 NAG 2 n D NAG 2 D 2 NAG A 1535 NAG 2 n D FUC 3 D 3 FUC A 1536 FUC 2 n E NAG 1 E 1 NAG B 1531 NAG 2 n E NAG 2 E 2 NAG B 1532 NAG 2 n E FUC 3 E 3 FUC B 1533 FUC 2 n F NAG 1 F 1 NAG B 1534 NAG 2 n F NAG 2 F 2 NAG B 1535 NAG 2 n F FUC 3 F 3 FUC B 1536 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 65 A CYS 65 1_555 A SG CYS 92 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf2 A SG CYS 252 A CYS 252 1_555 A SG CYS 263 A CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 A SG CYS 400 A CYS 400 1_555 A SG CYS 519 A CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf4 B SG CYS 65 B CYS 65 1_555 B SG CYS 92 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf5 B SG CYS 252 B CYS 252 1_555 B SG CYS 263 B CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf6 B SG CYS 400 B CYS 400 1_555 B SG CYS 519 B CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? covale ? covale1 A ND2 ASN 57 A ASN 57 1_555 I C1 NAG . A NAG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.478 ? covale ? covale2 A ND2 ASN 106 A ASN 106 1_555 H C1 NAG . A NAG 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? covale ? covale3 A OG SER 198 A SER 198 1_555 G P TCX . A TCX 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.606 ? covale ? covale4 A ND2 ASN 241 A ASN 241 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.461 ? covale ? covale5 A ND2 ASN 341 A ASN 341 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale6 A ND2 ASN 485 A ASN 485 1_555 J C1 NAG . A NAG 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale7 B ND2 ASN 57 B ASN 57 1_555 P C1 NAG . B NAG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.47 ? covale ? covale8 B ND2 ASN 106 B ASN 106 1_555 O C1 NAG . B NAG 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale9 B OG SER 198 B SER 198 1_555 N P TCX . B TCX 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.612 ? covale ? covale10 B ND2 ASN 241 B ASN 241 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale11 B ND2 ASN 341 B ASN 341 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale12 B ND2 ASN 485 B ASN 485 1_555 Q C1 NAG . B NAG 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale13 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? covale ? covale14 C O6 NAG . C NAG 1 1_555 C C1 FUC . C FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? covale ? covale15 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale16 D O6 NAG . D NAG 1 1_555 D C1 FUC . D FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale17 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? covale ? covale18 E O6 NAG . E NAG 1 1_555 E C1 FUC . E FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale19 F O4 NAG . F NAG 1 1_555 F C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale20 F O6 NAG . F NAG 1 1_555 F C1 FUC . F FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2WIL _atom_sites.fract_transf_matrix[1][1] 0.006651 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006651 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007172 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 TCX A 1 601 600 TCX TCX . H 4 NAG A 1 608 1537 NAG NAG . I 4 NAG A 1 609 1538 NAG NAG . J 4 NAG A 1 610 1539 NAG NAG . K 5 SO4 A 1 611 1540 SO4 SO4 . L 5 SO4 A 1 612 1541 SO4 SO4 . M 6 CL A 1 613 1542 CL CL . N 3 TCX B 1 601 600 TCX TCX . O 4 NAG B 1 608 1537 NAG NAG . P 4 NAG B 1 609 1538 NAG NAG . Q 4 NAG B 1 610 1539 NAG NAG . R 5 SO4 B 1 611 1540 SO4 SO4 . S 7 HOH A 1 701 2041 HOH HOH . S 7 HOH A 2 702 2002 HOH HOH . S 7 HOH A 3 703 2034 HOH HOH . S 7 HOH A 4 704 2016 HOH HOH . S 7 HOH A 5 705 2028 HOH HOH . S 7 HOH A 6 706 2017 HOH HOH . S 7 HOH A 7 707 2053 HOH HOH . S 7 HOH A 8 708 2054 HOH HOH . S 7 HOH A 9 709 2023 HOH HOH . S 7 HOH A 10 710 2027 HOH HOH . S 7 HOH A 11 711 2046 HOH HOH . S 7 HOH A 12 712 2007 HOH HOH . S 7 HOH A 13 713 2024 HOH HOH . S 7 HOH A 14 714 2038 HOH HOH . S 7 HOH A 15 715 2065 HOH HOH . S 7 HOH A 16 716 2014 HOH HOH . S 7 HOH A 17 717 2013 HOH HOH . S 7 HOH A 18 718 2036 HOH HOH . S 7 HOH A 19 719 2025 HOH HOH . S 7 HOH A 20 720 2044 HOH HOH . S 7 HOH A 21 721 2055 HOH HOH . S 7 HOH A 22 722 2004 HOH HOH . S 7 HOH A 23 723 2047 HOH HOH . S 7 HOH A 24 724 2063 HOH HOH . S 7 HOH A 25 725 2033 HOH HOH . S 7 HOH A 26 726 2049 HOH HOH . S 7 HOH A 27 727 2064 HOH HOH . S 7 HOH A 28 728 2008 HOH HOH . S 7 HOH A 29 729 2056 HOH HOH . S 7 HOH A 30 730 2040 HOH HOH . S 7 HOH A 31 731 2060 HOH HOH . S 7 HOH A 32 732 2051 HOH HOH . S 7 HOH A 33 733 2018 HOH HOH . S 7 HOH A 34 734 2015 HOH HOH . S 7 HOH A 35 735 2011 HOH HOH . S 7 HOH A 36 736 2019 HOH HOH . S 7 HOH A 37 737 2005 HOH HOH . S 7 HOH A 38 738 2037 HOH HOH . S 7 HOH A 39 739 2058 HOH HOH . S 7 HOH A 40 740 2062 HOH HOH . S 7 HOH A 41 741 2029 HOH HOH . S 7 HOH A 42 742 2059 HOH HOH . S 7 HOH A 43 743 2052 HOH HOH . S 7 HOH A 44 744 2061 HOH HOH . S 7 HOH A 45 745 2050 HOH HOH . S 7 HOH A 46 746 2045 HOH HOH . S 7 HOH A 47 747 2042 HOH HOH . S 7 HOH A 48 748 2035 HOH HOH . S 7 HOH A 49 749 2031 HOH HOH . S 7 HOH A 50 750 2043 HOH HOH . S 7 HOH A 51 751 2006 HOH HOH . S 7 HOH A 52 752 2030 HOH HOH . S 7 HOH A 53 753 2026 HOH HOH . S 7 HOH A 54 754 2032 HOH HOH . S 7 HOH A 55 755 2039 HOH HOH . S 7 HOH A 56 756 2057 HOH HOH . S 7 HOH A 57 757 2009 HOH HOH . S 7 HOH A 58 758 2012 HOH HOH . S 7 HOH A 59 759 2010 HOH HOH . S 7 HOH A 60 760 2021 HOH HOH . S 7 HOH A 61 761 2048 HOH HOH . S 7 HOH A 62 762 2022 HOH HOH . S 7 HOH A 63 763 2001 HOH HOH . S 7 HOH A 64 764 2003 HOH HOH . S 7 HOH A 65 765 2020 HOH HOH . T 7 HOH B 1 701 2047 HOH HOH . T 7 HOH B 2 702 2027 HOH HOH . T 7 HOH B 3 703 2008 HOH HOH . T 7 HOH B 4 704 2033 HOH HOH . T 7 HOH B 5 705 2031 HOH HOH . T 7 HOH B 6 706 2023 HOH HOH . T 7 HOH B 7 707 2013 HOH HOH . T 7 HOH B 8 708 2024 HOH HOH . T 7 HOH B 9 709 2052 HOH HOH . T 7 HOH B 10 710 2011 HOH HOH . T 7 HOH B 11 711 2068 HOH HOH . T 7 HOH B 12 712 2066 HOH HOH . T 7 HOH B 13 713 2025 HOH HOH . T 7 HOH B 14 714 2016 HOH HOH . T 7 HOH B 15 715 2039 HOH HOH . T 7 HOH B 16 716 2049 HOH HOH . T 7 HOH B 17 717 2041 HOH HOH . T 7 HOH B 18 718 2002 HOH HOH . T 7 HOH B 19 719 2054 HOH HOH . T 7 HOH B 20 720 2055 HOH HOH . T 7 HOH B 21 721 2014 HOH HOH . T 7 HOH B 22 722 2043 HOH HOH . T 7 HOH B 23 723 2063 HOH HOH . T 7 HOH B 24 724 2064 HOH HOH . T 7 HOH B 25 725 2062 HOH HOH . T 7 HOH B 26 726 2036 HOH HOH . T 7 HOH B 27 727 2045 HOH HOH . T 7 HOH B 28 728 2053 HOH HOH . T 7 HOH B 29 729 2019 HOH HOH . T 7 HOH B 30 730 2021 HOH HOH . T 7 HOH B 31 731 2028 HOH HOH . T 7 HOH B 32 732 2017 HOH HOH . T 7 HOH B 33 733 2034 HOH HOH . T 7 HOH B 34 734 2004 HOH HOH . T 7 HOH B 35 735 2007 HOH HOH . T 7 HOH B 36 736 2070 HOH HOH . T 7 HOH B 37 737 2030 HOH HOH . T 7 HOH B 38 738 2061 HOH HOH . T 7 HOH B 39 739 2048 HOH HOH . T 7 HOH B 40 740 2038 HOH HOH . T 7 HOH B 41 741 2042 HOH HOH . T 7 HOH B 42 742 2071 HOH HOH . T 7 HOH B 43 743 2059 HOH HOH . T 7 HOH B 44 744 2010 HOH HOH . T 7 HOH B 45 745 2060 HOH HOH . T 7 HOH B 46 746 2006 HOH HOH . T 7 HOH B 47 747 2035 HOH HOH . T 7 HOH B 48 748 2040 HOH HOH . T 7 HOH B 49 749 2058 HOH HOH . T 7 HOH B 50 750 2015 HOH HOH . T 7 HOH B 51 751 2026 HOH HOH . T 7 HOH B 52 752 2001 HOH HOH . T 7 HOH B 53 753 2022 HOH HOH . T 7 HOH B 54 754 2051 HOH HOH . T 7 HOH B 55 755 2072 HOH HOH . T 7 HOH B 56 756 2020 HOH HOH . T 7 HOH B 57 757 2056 HOH HOH . T 7 HOH B 58 758 2018 HOH HOH . T 7 HOH B 59 759 2037 HOH HOH . T 7 HOH B 60 760 2046 HOH HOH . T 7 HOH B 61 761 2067 HOH HOH . T 7 HOH B 62 762 2005 HOH HOH . T 7 HOH B 63 763 2069 HOH HOH . T 7 HOH B 64 764 2003 HOH HOH . T 7 HOH B 65 765 2050 HOH HOH . T 7 HOH B 66 766 2057 HOH HOH . T 7 HOH B 67 767 2032 HOH HOH . T 7 HOH B 68 768 2044 HOH HOH . T 7 HOH B 69 769 2065 HOH HOH . T 7 HOH B 70 770 2009 HOH HOH . T 7 HOH B 71 771 2029 HOH HOH . T 7 HOH B 72 772 2012 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 6 _atom_site.Cartn_x -41.69 _atom_site.Cartn_y -17.814 _atom_site.Cartn_z 28.357 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 70.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 613 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #