data_2WMX # _model_server_result.job_id l5QjtfdGlfnJsBCLeHpA3w _model_server_result.datetime_utc '2024-11-22 07:23:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2wmx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1270}' # _entry.id 2WMX # _exptl.entry_id 2WMX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 309.366 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[(2S)-4-(5-phenyl-1H-pyrazolo[3,4-b]pyridin-4-yl)morpholin-2-yl]methanamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.77 _cell.angle_gamma 90 _cell.entry_id 2WMX _cell.length_a 44.87 _cell.length_b 65.57 _cell.length_c 57.85 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2WMX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H19 N5 O' _chem_comp.formula_weight 309.366 _chem_comp.id ZY6 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[(2S)-4-(5-phenyl-1H-pyrazolo[3,4-b]pyridin-4-yl)morpholin-2-yl]methanamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAE CAC ZY6 sing 376 n y CAE CAQ ZY6 doub 377 n y CAC CAB ZY6 doub 378 n y CAB CAD ZY6 sing 379 n y CAD CAF ZY6 doub 380 n y CAF CAQ ZY6 sing 381 n y CAQ CAR ZY6 sing 382 n y CAR CAG ZY6 sing 383 n y CAR CAS ZY6 doub 384 n y CAG NAN ZY6 doub 385 n y NAN CAU ZY6 sing 386 n y CAU NAO ZY6 sing 387 n y CAU CAT ZY6 doub 388 n y NAO NAM ZY6 sing 389 n y NAM CAH ZY6 doub 390 n y CAH CAT ZY6 sing 391 n y CAT CAS ZY6 sing 392 n y CAS NAV ZY6 sing 393 n n NAV CAL ZY6 sing 394 n n NAV CAK ZY6 sing 395 n n CAL CAW ZY6 sing 396 n n CAK CAJ ZY6 sing 397 n n CAJ OAP ZY6 sing 398 n n OAP CAW ZY6 sing 399 n n CAW CAI ZY6 sing 400 n n CAI NAA ZY6 sing 401 n n CAE HAE ZY6 sing 402 n n CAC HAC ZY6 sing 403 n n CAB HAB ZY6 sing 404 n n CAD HAD ZY6 sing 405 n n CAF HAF ZY6 sing 406 n n CAG HAG ZY6 sing 407 n n NAO HAO ZY6 sing 408 n n CAH HAH ZY6 sing 409 n n CAL HAL1 ZY6 sing 410 n n CAL HAL2 ZY6 sing 411 n n CAK HAK1 ZY6 sing 412 n n CAK HAK2 ZY6 sing 413 n n CAW HAW ZY6 sing 414 n n CAJ HAJ1 ZY6 sing 415 n n CAJ HAJ2 ZY6 sing 416 n n CAI HAI1 ZY6 sing 417 n n CAI HAI2 ZY6 sing 418 n n NAA HAA1 ZY6 sing 419 n n NAA HAA2 ZY6 sing 420 n n # _atom_sites.entry_id 2WMX _atom_sites.fract_transf_matrix[1][1] 0.022287 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001469 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015251 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017324 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZY6 A 1 1270 1270 ZY6 ZY6 . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2028 2028 HOH HOH . C 3 HOH A 29 2029 2029 HOH HOH . C 3 HOH A 30 2030 2030 HOH HOH . C 3 HOH A 31 2031 2031 HOH HOH . C 3 HOH A 32 2032 2032 HOH HOH . C 3 HOH A 33 2033 2033 HOH HOH . C 3 HOH A 34 2034 2034 HOH HOH . C 3 HOH A 35 2035 2035 HOH HOH . C 3 HOH A 36 2036 2036 HOH HOH . C 3 HOH A 37 2037 2037 HOH HOH . C 3 HOH A 38 2038 2038 HOH HOH . C 3 HOH A 39 2039 2039 HOH HOH . C 3 HOH A 40 2040 2040 HOH HOH . C 3 HOH A 41 2041 2041 HOH HOH . C 3 HOH A 42 2042 2042 HOH HOH . C 3 HOH A 43 2043 2043 HOH HOH . C 3 HOH A 44 2044 2044 HOH HOH . C 3 HOH A 45 2045 2045 HOH HOH . C 3 HOH A 46 2046 2046 HOH HOH . C 3 HOH A 47 2047 2047 HOH HOH . C 3 HOH A 48 2048 2048 HOH HOH . C 3 HOH A 49 2049 2049 HOH HOH . C 3 HOH A 50 2050 2050 HOH HOH . C 3 HOH A 51 2051 2051 HOH HOH . C 3 HOH A 52 2052 2052 HOH HOH . C 3 HOH A 53 2053 2053 HOH HOH . C 3 HOH A 54 2054 2054 HOH HOH . C 3 HOH A 55 2055 2055 HOH HOH . C 3 HOH A 56 2056 2056 HOH HOH . C 3 HOH A 57 2057 2057 HOH HOH . C 3 HOH A 58 2058 2058 HOH HOH . C 3 HOH A 59 2059 2059 HOH HOH . C 3 HOH A 60 2060 2060 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAE ZY6 . . . B 2 19.978 -2.209 10.843 1 87.51 ? CAE ZY6 1270 A 1 HETATM 2 C CAC ZY6 . . . B 2 21.269 -2.71 10.881 1 87.51 ? CAC ZY6 1270 A 1 HETATM 3 C CAB ZY6 . . . B 2 21.979 -2.864 9.705 1 87.51 ? CAB ZY6 1270 A 1 HETATM 4 C CAD ZY6 . . . B 2 21.391 -2.516 8.501 1 87.51 ? CAD ZY6 1270 A 1 HETATM 5 C CAF ZY6 . . . B 2 20.097 -2.017 8.468 1 87.51 ? CAF ZY6 1270 A 1 HETATM 6 C CAQ ZY6 . . . B 2 19.376 -1.878 9.64 1 87.51 ? CAQ ZY6 1270 A 1 HETATM 7 C CAR ZY6 . . . B 2 18.095 -1.35 9.632 1 87.51 ? CAR ZY6 1270 A 1 HETATM 8 C CAG ZY6 . . . B 2 17.929 -0.102 9.057 1 87.51 ? CAG ZY6 1270 A 1 HETATM 9 N NAN ZY6 . . . B 2 16.757 0.492 9.017 1 87.51 ? NAN ZY6 1270 A 1 HETATM 10 C CAU ZY6 . . . B 2 15.676 -0.087 9.546 1 87.51 ? CAU ZY6 1270 A 1 HETATM 11 N NAO ZY6 . . . B 2 14.412 0.309 9.652 1 87.51 ? NAO ZY6 1270 A 1 HETATM 12 N NAM ZY6 . . . B 2 13.771 -0.581 10.216 1 87.51 ? NAM ZY6 1270 A 1 HETATM 13 C CAH ZY6 . . . B 2 14.553 -1.606 10.549 1 87.51 ? CAH ZY6 1270 A 1 HETATM 14 C CAT ZY6 . . . B 2 15.777 -1.328 10.139 1 87.51 ? CAT ZY6 1270 A 1 HETATM 15 C CAS ZY6 . . . B 2 17.003 -1.987 10.2 1 87.51 ? CAS ZY6 1270 A 1 HETATM 16 N NAV ZY6 . . . B 2 17.119 -3.25 10.807 1 87.51 ? NAV ZY6 1270 A 1 HETATM 17 C CAL ZY6 . . . B 2 18.341 -3.673 11.519 1 87.51 ? CAL ZY6 1270 A 1 HETATM 18 C CAK ZY6 . . . B 2 15.988 -4.189 10.775 1 87.51 ? CAK ZY6 1270 A 1 HETATM 19 C CAJ ZY6 . . . B 2 15.858 -4.928 12.106 1 87.51 ? CAJ ZY6 1270 A 1 HETATM 20 O OAP ZY6 . . . B 2 17.127 -5.446 12.477 1 87.51 ? OAP ZY6 1270 A 1 HETATM 21 C CAW ZY6 . . . B 2 17.956 -4.362 12.835 1 87.51 ? CAW ZY6 1270 A 1 HETATM 22 C CAI ZY6 . . . B 2 19.135 -4.96 13.622 1 87.51 ? CAI ZY6 1270 A 1 HETATM 23 N NAA ZY6 . . . B 2 19.818 -3.943 14.438 1 87.51 ? NAA ZY6 1270 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #